PPFIA1

General Information

Gene Name : PPFIA1
Gene ID : ENSG00000131626.18
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: PPFIA1)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	PPFIA1	ENSG00000131626.18	9.10	10.90	10.00	ENCSR000AEF
HepG2	PPFIA1	ENSG00000131626.18	20.71	18.00	19.36	ENCSR985KAT
K562	PPFIA1	ENSG00000131626.18	26.16	26.59	26.38	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for PPFIA1 is not avaliable on ENCORE database.

Proteins bound to RNA

PPFIA1 RNA is bound by 41 proteins.

CanvasJS.com

eCLIP assay for PPFIA1 is not avaliable on ENCORE database.

41 proteins are bound to PPFIA1 RNA:

Show entries

Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr11	70217540	70217627	+	intron-Distal	6.44707	80.68959	K562	EXOSC5
chr11	70217542	70217639	+	intron-Distal	7.63483	29.78982	HepG2	RBFOX2
chr11	70229406	70229477	+	3'-UTR	5.57935	29.37775	K562	PUM2
chr11	70217433	70217491	+	intron-Distal	6.06908	28.68352	K562	EXOSC5
chr11	70217539	70217626	+	intron-Distal	4.90406	28.51685	K562	RBFOX2
chr11	70217539	70217629	+	intron-Distal	6.41085	27.86269	HepG2	FUBP3
chr11	70229331	70229403	+	3'-UTR	4.67511	26.45995	K562	PUM2
chr11	70217566	70217596	+	intron-Distal	6.68213	25.05975	HepG2	BCCIP
chr11	70217596	70217624	+	intron-Distal	6.36030	21.07289	HepG2	BCCIP
chr11	70217491	70217540	+	intron-Distal	6.57440	19.66775	K562	EXOSC5
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 156 entries

eCLIP assay for PPFIA1 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for PPFIA1 is not available on ENCORE database.
54 RBPs can affect the levels of PPFIA1.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for PPFIA1 is not available on ENCORE database.

54 RBPs can affect the gene expression of PPFIA1 :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
PPFIA1	ENSG00000131626.11	871.24530	1310.73590	-0.58920	11.55220	10.44160	HepG2	PUS1
PPFIA1	ENSG00000131626.11	734.66100	1116.10050	-0.60330	11.09090	9.89860	HepG2	ZC3H8
PPFIA1	ENSG00000131626.11	673.40420	1100.22680	-0.70830	10.34940	9.48930	HepG2	TIAL1
PPFIA1	ENSG00000131626.11	991.65680	1424.68960	-0.52270	8.20160	6.90110	HepG2	EIF4G1
PPFIA1	ENSG00000131626.11	772.09210	1289.87580	-0.74040	8.20390	6.89540	HepG2	ASCC1
PPFIA1	ENSG00000131626.11	594.91110	1018.17800	-0.77520	7.83130	6.62340	HepG2	XRN2
PPFIA1	ENSG00000131626.11	900.29620	1190.15620	-0.40270	5.99830	4.83610	HepG2	DDX19B
PPFIA1	ENSG00000131626.11	2896.85040	2284.99270	0.34220	5.69960	4.81430	K562	DDX47
PPFIA1	ENSG00000131626.11	920.01240	1231.16570	-0.42030	5.45120	4.55820	HepG2	DKC1
PPFIA1	ENSG00000131626.11	1041.81690	1431.81570	-0.45870	5.52870	4.45660	HepG2	NOL12
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 56 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for PPFIA1 is not available on ENCORE database.

35 RBPs can affect the splicing of PPFIA1 :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	FDR	is_included	Cell Line	Affected by RBP
SE	PPFIA1	ENSG00000131626.11	chr11	+	70196028	70196145	70194294	70194526	70200406	70200558	0.20400	0.00040	included	K562	XRCC6
SE	PPFIA1	ENSG00000131626.11	chr11	+	70196028	70196145	70194294	70194526	70200406	70200558	0.13300	0.00143	included	K562	PUM1
SE	PPFIA1	ENSG00000131626.11	chr11	+	70196028	70196145	70194294	70194526	70200406	70200558	0.19900	0.00000	included	K562	FMR1
SE	PPFIA1	ENSG00000131626.11	chr11	+	70196028	70196145	70194294	70194526	70200406	70200558	0.52600	0.00000	included	HepG2	HNRNPK
SE	PPFIA1	ENSG00000131626.11	chr11	+	70183470	70183533	70181668	70181800	70184479	70184559	-0.20200	0.00000	excluded	HepG2	U2AF2
SE	PPFIA1	ENSG00000131626.11	chr11	+	70196028	70196145	70194294	70194526	70200406	70200558	0.07800	0.00014	included	K562	DROSHA
SE	PPFIA1	ENSG00000131626.11	chr11	+	70196028	70196145	70194294	70194526	70200406	70200558	0.14800	0.00260	included	HepG2	UPF1
SE	PPFIA1	ENSG00000131626.11	chr11	+	70196028	70196145	70194294	70194526	70200406	70200558	0.16700	0.00114	included	K562	GPKOW
SE	PPFIA1	ENSG00000131626.11	chr11	+	70196028	70196145	70194294	70194526	70200406	70200558	0.23400	0.00014	included	HepG2	MATR3
SE	PPFIA1	ENSG00000131626.11	chr11	+	70196028	70196145	70194294	70194526	70200406	70200558	-0.07100	0.00004	excluded	K562	UTP18

Showing 1 to 10 of 48 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

PPFIA1

General Information

Functions

Localization

Domains (AlphaFold: PPFIA1)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for PPFIA1 is not avaliable on ENCORE database.

41 proteins are bound to PPFIA1 RNA:

eCLIP assay for PPFIA1 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for PPFIA1 is not available on ENCORE database.

54 RBPs can affect the gene expression of PPFIA1 :

The Knockdown/knockout RNA-Seq assay for PPFIA1 is not available on ENCORE database.

35 RBPs can affect the splicing of PPFIA1 :

The Knockdown/knockout RNA-Seq assay for PPFIA1 is not avaliable on ENCORE database.