PIGQ

General Information

Gene Name : PIGQ
Gene ID : ENSG00000007541.16
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: PIGQ)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	PIGQ	ENSG00000007541.16	1.22	3.01	2.11	ENCSR000AEF
HepG2	PIGQ	ENSG00000007541.16	15.11	3.76	9.43	ENCSR985KAT
K562	PIGQ	ENSG00000007541.16	15.80	7.84	11.82	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for PIGQ is not avaliable on ENCORE database.

Proteins bound to RNA

PIGQ RNA is bound by 24 proteins.

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eCLIP assay for PIGQ is not avaliable on ENCORE database.

24 proteins are bound to PIGQ RNA:

Show entries

Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr16	621088	621216	+	intron-Distal	7.68999	104.80957	K562	EIF4G2
chr16	621225	621292	+	intron-Distal	8.11181	90.34605	K562	EIF4G2
chr16	621294	621323	+	intron-Distal	8.16668	54.16363	K562	EIF4G2
chr16	621347	621400	+	intron-Distal	8.35654	50.11955	K562	EIF4G2
chr16	621461	621544	+	intron-Distal	8.21108	48.09846	K562	EIF4G2
chr16	621571	621638	+	intron-Distal	5.56589	37.15185	K562	EIF4G2
chr16	621233	621325	+	intron-Distal	7.25137	34.04676	K562	AATF
chr16	621544	621571	+	intron-Distal	6.76085	32.57637	K562	EIF4G2
chr16	621227	621292	+	intron-Distal	5.73060	32.54768	HepG2	DKC1
chr16	621087	621181	+	intron-Distal	8.34312	30.80009	K562	AATF
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 72 entries

eCLIP assay for PIGQ is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for PIGQ is not available on ENCORE database.
96 RBPs can affect the levels of PIGQ.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for PIGQ is not available on ENCORE database.

96 RBPs can affect the gene expression of PIGQ :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
PIGQ	ENSG00000007541.10	480.25850	178.60380	1.42690	25.38120	23.95180	HepG2	PUM1
PIGQ	ENSG00000007541.10	502.53210	188.93180	1.41120	23.81050	22.27740	HepG2	SUCLG1
PIGQ	ENSG00000007541.10	755.53220	326.49990	1.21030	21.93860	20.69760	HepG2	NELFE
PIGQ	ENSG00000007541.10	90.23130	286.53910	-1.66700	17.60390	16.36390	HepG2	TAF15
PIGQ	ENSG00000007541.10	104.10870	334.59160	-1.68430	16.35630	14.77890	HepG2	U2AF1
PIGQ	ENSG00000007541.10	270.09050	559.93120	-1.05180	15.70030	14.76320	HepG2	SRFBP1
PIGQ	ENSG00000007541.10	736.28270	322.32750	1.19160	14.02620	12.76590	K562	HNRNPC
PIGQ	ENSG00000007541.10	292.43280	108.02000	1.43670	13.94260	11.87060	K562	RBM22
PIGQ	ENSG00000007541.10	249.51700	100.59450	1.31050	13.07740	11.76620	HepG2	DNAJC2
PIGQ	ENSG00000007541.10	281.04440	112.70380	1.31820	12.72690	11.35750	K562	PTBP1
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 113 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for PIGQ is not available on ENCORE database.

11 RBPs can affect the splicing of PIGQ :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
RI	PIGQ	ENSG00000007541.10	chr16	+	630182	630972	630182	630263	630857	630972	-0.09700	0.00005	0.01438	excluded	K562	PUM1
SE	PIGQ	ENSG00000007541.10	chr16	+	632247	632309	630857	630972	632882	633095	0.73300	0.00009	0.03166	included	HepG2	NOL12
RI	PIGQ	ENSG00000007541.10	chr16	+	630182	630972	630182	630263	630857	630972	-0.21000	0.00009	0.01733	excluded	K562	XRN2
A3SS	PIGQ	ENSG00000007541.10	chr16	+	630182	630972	630857	630972	629126	629180	-0.55400	0.00010	0.03914	shorter	HepG2	SRSF9
SE	PIGQ	ENSG00000007541.10	chr16	+	631198	631341	630857	630972	632247	632309	-0.24800	0.00052	0.02306	excluded	K562	HNRNPU
SE	PIGQ	ENSG00000007541.10	chr16	+	632247	632309	630857	630972	632882	633095	-0.39500	0.00061	0.06695	excluded	K562	FMR1
SE	PIGQ	ENSG00000007541.10	chr16	+	630182	630263	629068	629180	630857	630972	0.16300	0.00061	0.05062	included	HepG2	TBRG4
RI	PIGQ	ENSG00000007541.10	chr16	+	630182	630972	630182	630263	630857	630972	0.26700	0.00064	0.00499	included	K562	PUS1
SE	PIGQ	ENSG00000007541.10	chr16	+	630182	630263	629068	629180	630857	630972	-0.43000	0.00095	0.05846	excluded	HepG2	SRSF9
SE	PIGQ	ENSG00000007541.10	chr16	+	631198	631341	630857	630972	632247	632309	0.41000	0.00110	0.01851	included	K562	PUS1

Showing 1 to 10 of 16 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

PIGQ

General Information

Functions

Localization

Domains (AlphaFold: PIGQ)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for PIGQ is not avaliable on ENCORE database.

24 proteins are bound to PIGQ RNA:

eCLIP assay for PIGQ is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for PIGQ is not available on ENCORE database.

96 RBPs can affect the gene expression of PIGQ :

The Knockdown/knockout RNA-Seq assay for PIGQ is not available on ENCORE database.

11 RBPs can affect the splicing of PIGQ :

The Knockdown/knockout RNA-Seq assay for PIGQ is not avaliable on ENCORE database.