MACROD1

General Information

Gene Name : MACROD1
Gene ID : ENSG00000133315.10
Essential Gene : Yes

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: MACROD1)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	MACROD1	ENSG00000133315.10	3.57	1.86	2.71	ENCSR000AEF
HepG2	MACROD1	ENSG00000133315.10	22.73	13.87	18.30	ENCSR985KAT
K562	MACROD1	ENSG00000133315.10	13.99	9.01	11.50	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for MACROD1 is not avaliable on ENCORE database.

Proteins bound to RNA

MACROD1 RNA is bound by 47 proteins.

CanvasJS.com

eCLIP assay for MACROD1 is not avaliable on ENCORE database.

47 proteins are bound to MACROD1 RNA:

Show entries

Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr11	63880799	63880903	-	intron-Distal	6.39827	400.00000	K562	AGGF1
chr11	63882030	63882114	-	intron-Distal	6.86854	400.00000	K562	AGGF1
chr11	63881614	63881740	-	intron-Distal	8.85005	220.34893	K562	AGGF1
chr11	63881423	63881513	-	intron-Distal	7.13315	123.34595	K562	AGGF1
chr11	63881199	63881237	-	intron-Distal	7.83349	112.66215	K562	AGGF1
chr11	63881294	63881351	-	intron-Distal	8.71303	103.70148	K562	AGGF1
chr11	63881237	63881258	-	intron-Distal	7.01725	95.43716	K562	AGGF1
chr11	63882142	63882195	-	intron-Distal	6.82419	81.33678	K562	AGGF1
chr11	63881152	63881199	-	intron-Distal	8.38610	78.65491	K562	AGGF1
chr11	63881831	63881895	-	intron-Distal	6.65030	72.04195	K562	AGGF1
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 611 entries

eCLIP assay for MACROD1 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for MACROD1 is not available on ENCORE database.
77 RBPs can affect the levels of MACROD1.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for MACROD1 is not available on ENCORE database.

77 RBPs can affect the gene expression of MACROD1 :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
MACROD1	ENSG00000133315.6	122.03540	394.74030	-1.69360	24.24630	22.57380	K562	FXR1
MACROD1	ENSG00000133315.6	59.50620	214.54730	-1.85020	15.55440	14.62800	HepG2	SRSF1
MACROD1	ENSG00000133315.6	59.65020	229.89400	-1.94640	15.29320	13.76880	HepG2	U2AF1
MACROD1	ENSG00000133315.6	981.33030	589.21600	0.73580	12.94710	11.81790	K562	AGGF1
MACROD1	ENSG00000133315.6	1077.78010	643.32070	0.74440	12.97240	10.83040	K562	ATP5C1
MACROD1	ENSG00000133315.6	84.82750	228.55280	-1.42990	11.72920	10.63100	HepG2	UTP3
MACROD1	ENSG00000133315.6	225.96300	89.77140	1.33170	11.55870	10.52260	HepG2	TRIM56
MACROD1	ENSG00000133315.6	94.31210	266.93300	-1.50100	10.89310	9.49200	HepG2	SF3A3
MACROD1	ENSG00000133315.6	113.81560	269.68020	-1.24460	10.21610	9.36100	HepG2	RBM22
MACROD1	ENSG00000133315.6	55.35090	164.00720	-1.56710	10.27640	8.72930	K562	U2AF2
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 86 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for MACROD1 is not available on ENCORE database.

3 RBPs can affect the splicing of MACROD1 :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
SE	MACROD1	ENSG00000133315.6	chr11	-	63782723	63782753	63767698	63767815	63918710	63918827	0.12000	0.00013	0.00912	included	HepG2	PCBP1
SE	MACROD1	ENSG00000133315.6	chr11	-	63766309	63766344	63766041	63766159	63766426	63766472	-0.29100	0.00331	0.03320	excluded	K562	AQR
SE	MACROD1	ENSG00000133315.6	chr11	-	63782723	63782753	63767698	63767815	63918710	63918827	0.22500	0.00703	0.09899	included	K562	SRSF1

Showing 1 to 3 of 3 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

MACROD1

General Information

Functions

Localization

Domains (AlphaFold: MACROD1)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for MACROD1 is not avaliable on ENCORE database.

47 proteins are bound to MACROD1 RNA:

eCLIP assay for MACROD1 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for MACROD1 is not available on ENCORE database.

77 RBPs can affect the gene expression of MACROD1 :

The Knockdown/knockout RNA-Seq assay for MACROD1 is not available on ENCORE database.

3 RBPs can affect the splicing of MACROD1 :

The Knockdown/knockout RNA-Seq assay for MACROD1 is not avaliable on ENCORE database.