ZNF788

General Information

Gene Name       : ZNF788
Gene ID             :
Essential Gene : No

Functions

Localization

Domains (AlphaFold: ZNF788)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for ZNF788 is not avaliable on ENCORE database.



Proteins bound to RNA
  • ZNF788 RNA is bound by 1 proteins.  







eCLIP assay for ZNF788 is not avaliable on ENCORE database.





1 proteins are bound to ZNF788 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr191222426912224373+3'-UTR,CDS,intron-Distal,intron-Proximal5.235996.99355K562LIN28B
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for ZNF788 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for ZNF788 is not available on ENCORE database.

  • 102 RBPs can affect the levels of ZNF788.  








The Knockdown/knockout RNA-Seq assay for ZNF788 is not available on ENCORE database.





102 RBPs can affect the gene expression of ZNF788 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
ZNF788ENSG00000188474.60.0000067.74900-99999.999993.694101.77660HepG2APOBEC3C
ZNF788ENSG00000214189.483.3322018.538502.168204.675702.41590HepG2APOBEC3C
ZNF788ENSG00000188474.6126.8930023.075002.459105.628604.70890HepG2AUH
ZNF788ENSG00000214189.493.08130219.79760-1.239609.663208.51060HepG2AUH
ZNF788ENSG00000188474.60.31950133.06520-8.7019020.6986018.02710HepG2BCCIP
ZNF788ENSG00000214189.4122.3966022.922202.416604.587003.37850HepG2BCCIP
ZNF788ENSG00000188474.69.3989052.64760-2.485805.577304.63230HepG2CPSF6
ZNF788ENSG00000188474.60.0000067.67280-99999.9999920.8021018.25550HepG2YBX3
ZNF788ENSG00000188474.68.0058082.24120-3.360807.099805.48970HepG2CSTF2
ZNF788ENSG00000214189.495.3988014.122802.755808.001506.33050HepG2CSTF2
ZNF788ENSG00000188474.6110.693301.254706.4630034.0629032.02570HepG2DAZAP1
ZNF788ENSG00000214189.425.23140191.21780-2.9219014.3437012.88040HepG2DAZAP1
ZNF788ENSG00000188474.60.5648067.76910-6.9068018.8406016.36590HepG2DDX1
ZNF788ENSG00000188474.613.1188068.19680-2.378102.252301.43830HepG2DDX24
ZNF788ENSG00000188474.611.3684099.16310-3.124807.875405.72080HepG2DDX28
ZNF788ENSG00000214189.477.3865017.033602.183603.654002.04850HepG2DDX28
ZNF788ENSG00000188474.65.1268084.20200-4.0377016.3763014.42180HepG2EEF2
ZNF788ENSG00000214189.475.092907.385303.345809.981808.36970HepG2EEF2
ZNF788ENSG00000188474.618.6410068.35610-1.874603.284102.30580HepG2EIF3D
ZNF788ENSG00000188474.697.2538028.014701.795503.366101.42350HepG2EIF3H
ZNF788ENSG00000188474.633.14780108.90370-1.716102.607601.37160HepG2FKBP4
ZNF788ENSG00000214189.491.1655018.753902.281203.359101.96690HepG2FKBP4
ZNF788ENSG00000188474.61.7011052.73300-4.954208.437406.67940HepG2FTO
ZNF788ENSG00000214189.486.593704.851704.1576015.6673012.20780HepG2GRWD1
ZNF788ENSG00000188474.6143.3086027.554402.3787011.965709.05980HepG2HLTF
ZNF788ENSG00000214189.43.57790118.41150-5.0485023.4468019.37960HepG2HLTF
ZNF788ENSG00000188474.6144.915301.155406.9706046.8220043.94630HepG2HNRNPA2B1
ZNF788ENSG00000214189.410.56950175.71830-4.0553033.0247030.54150HepG2HNRNPA2B1
ZNF788ENSG00000214189.457.0260016.482701.790602.705301.32080HepG2HNRNPAB
ZNF788ENSG00000188474.6100.332601.141606.457608.440507.32210HepG2HNRNPL
ZNF788ENSG00000214189.437.32460174.19500-2.222505.170004.27260HepG2HNRNPL
ZNF788ENSG00000188474.60.0000074.12940-99999.9999925.0200023.34690HepG2HNRNPU
ZNF788ENSG00000214189.467.998503.861204.138306.401303.16170HepG2HNRNPUL1
ZNF788ENSG00000188474.618.68170123.15810-2.7208010.001807.97310HepG2LARP7
ZNF788ENSG00000214189.4121.660805.124804.5691017.5997015.02690HepG2LARP7
ZNF788ENSG00000188474.656.81910129.30210-1.186304.835103.21870HepG2LIN28B
ZNF788ENSG00000214189.469.001605.370703.6834011.187308.89130HepG2LIN28B
ZNF788ENSG00000188474.610.42070104.27710-3.3229017.8950014.65060HepG2MARK2
ZNF788ENSG00000214189.496.028704.330504.4708021.3993017.89320HepG2MARK2
ZNF788ENSG00000188474.60.0000071.54290-99999.9999918.0705015.59950HepG2METAP2
ZNF788ENSG00000214189.469.886106.286203.474708.204106.49140HepG2METAP2
ZNF788ENSG00000188474.60.00000111.35760-99999.9999934.3879030.50500HepG2NIP7
ZNF788ENSG00000214189.4103.866504.632204.4868022.5234019.06870HepG2NIP7
ZNF788ENSG00000188474.60.00000120.03310-99999.9999921.8948018.72860HepG2NONO
ZNF788ENSG00000188474.60.0000050.50080-99999.9999912.4334010.95770HepG2NSUN2
ZNF788ENSG00000188474.60.00000125.13410-99999.9999936.8544032.48870HepG2NUSAP1
ZNF788ENSG00000214189.4143.666505.208804.7855027.4688023.70520HepG2NUSAP1
ZNF788ENSG00000188474.6121.5201073.377100.727702.579901.75950HepG2PARN
ZNF788ENSG00000214189.41.9225065.89480-5.099109.010407.62170HepG2PARN
ZNF788ENSG00000188474.6132.8454079.903400.733302.735502.13120HepG2PCBP1
ZNF788ENSG00000214189.44.0131092.04450-4.5195021.1873019.76410HepG2PCBP1
ZNF788ENSG00000188474.628.77000118.15370-2.038003.615501.69700HepG2PHF6
ZNF788ENSG00000214189.467.863804.904203.790505.534103.23440HepG2PHF6
ZNF788ENSG00000214189.427.612704.962202.476203.790302.34530HepG2PKM
ZNF788ENSG00000188474.618.59810101.00590-2.441204.992703.94150HepG2PRPF8
ZNF788ENSG00000214189.4125.77530180.98930-0.525102.018001.49750HepG2PUF60
ZNF788ENSG00000214189.4138.07500192.11720-0.476502.179301.64020HepG2PUM1
ZNF788ENSG00000188474.6158.7334031.577402.329504.764903.67730HepG2RBM15
ZNF788ENSG00000214189.45.03260135.31490-4.748903.410002.46740HepG2RBM15
ZNF788ENSG00000214189.462.678304.236903.886807.391304.30950HepG2RBM17
ZNF788ENSG00000188474.613.5951079.91620-2.555406.662105.65520HepG2RBM25
ZNF788ENSG00000188474.614.65340148.51020-3.3413021.2905018.57840HepG2RBM27
ZNF788ENSG00000214189.4109.008306.181004.1404017.6254015.14430HepG2RBM27
ZNF788ENSG00000214189.417.40240112.60320-2.693908.994405.57090HepG2RBM34
ZNF788ENSG00000188474.627.90940120.59700-2.1114010.082208.10150HepG2RCC2
ZNF788ENSG00000188474.639.7284084.26590-1.084802.458701.87350HepG2RECQL
ZNF788ENSG00000214189.4141.9881097.092800.548201.841501.32450HepG2RECQL
ZNF788ENSG00000188474.60.00000125.54330-99999.9999937.4476033.38240HepG2RPL23A
ZNF788ENSG00000214189.4131.626105.221004.6559024.8757021.20850HepG2RPL23A
ZNF788ENSG00000188474.60.0000066.51100-99999.9999922.0649020.59120HepG2RPS19
ZNF788ENSG00000214189.449.024805.833603.070905.421004.59320HepG2RPS19
ZNF788ENSG00000188474.640.31700136.96300-1.764303.714102.79120HepG2RPS2
ZNF788ENSG00000214189.483.059005.698303.865403.343902.46410HepG2RPS2
ZNF788ENSG00000188474.622.2258099.92500-2.168602.472501.72550HepG2RRP9
ZNF788ENSG00000214189.41.5952059.29040-5.216008.638107.59340HepG2SAFB2
ZNF788ENSG00000188474.60.0000069.15120-99999.999993.770501.96540HepG2SBDS
ZNF788ENSG00000214189.483.8436018.961002.144604.742402.75220HepG2SBDS
ZNF788ENSG00000188474.627.498100.0000099999.999906.817702.74610HepG2SDAD1
ZNF788ENSG00000188474.60.0000066.75820-99999.9999922.0232019.60360HepG2SERBP1
ZNF788ENSG00000214189.470.946505.865103.5964012.1710010.27180HepG2SERBP1
ZNF788ENSG00000214189.442.02030135.11040-1.685004.000903.18370HepG2SF3A3
ZNF788ENSG00000214189.42.2799053.73000-4.558704.979004.05440HepG2SF3B1
ZNF788ENSG00000188474.667.758401.143405.888904.189603.35170HepG2SLBP
ZNF788ENSG00000214189.451.22460173.51800-1.760202.365501.70960HepG2SLBP
ZNF788ENSG00000188474.612.6623076.98750-2.604107.236306.27260HepG2SMN1
ZNF788ENSG00000214189.468.35430115.07970-0.751502.346301.47210HepG2SMNDC1
ZNF788ENSG00000188474.6107.3356025.559102.070109.606506.66820HepG2SND1
ZNF788ENSG00000214189.43.72690109.83920-4.8813024.2468020.36220HepG2SND1
ZNF788ENSG00000214189.4193.45170101.779700.926402.031001.60850HepG2SRSF1
ZNF788ENSG00000188474.666.968701.176005.831505.164004.35020HepG2SRSF5
ZNF788ENSG00000188474.60.0000071.87870-99999.9999922.4631021.16930HepG2SRSF9
ZNF788ENSG00000214189.4272.57950206.833900.398101.905401.45920HepG2SSB
ZNF788ENSG00000188474.60.38150130.24990-8.4153020.2823018.75390HepG2SUPV3L1
ZNF788ENSG00000214189.4126.8289022.428002.499407.484706.46050HepG2SUPV3L1
ZNF788ENSG00000188474.699.6217055.500700.843902.444501.75740HepG2TARDBP
ZNF788ENSG00000214189.41.6916052.96920-4.968705.152104.20770HepG2TARDBP
ZNF788ENSG00000214189.426.1135084.05870-1.686602.400901.62060HepG2TIA1
ZNF788ENSG00000188474.6157.9805026.385502.5818014.8075011.79920HepG2TRA2A
ZNF788ENSG00000214189.42.59380113.43440-5.4506023.6103020.02160HepG2TRA2A
ZNF788ENSG00000188474.691.658801.164306.298703.510302.51390HepG2TUFM
ZNF788ENSG00000214189.439.38300176.80100-2.166506.610305.17400HepG2TUFM
ZNF788ENSG00000188474.6138.620901.234006.8116031.5998028.93730HepG2UBE2L3
ZNF788ENSG00000214189.45.25300187.12920-5.1548031.4243028.77010HepG2UBE2L3
ZNF788ENSG00000188474.60.0000076.96130-99999.9999915.4369013.68340HepG2UCHL5
ZNF788ENSG00000214189.454.8281013.234902.050502.665001.91990HepG2UCHL5
ZNF788ENSG00000188474.60.75960119.34090-7.2956017.5749015.08300HepG2UPF2
ZNF788ENSG00000214189.4128.2381020.483102.646209.198507.32420HepG2UPF2
ZNF788ENSG00000188474.60.00000128.21590-99999.9999921.5325019.59050HepG2XRN2
ZNF788ENSG00000214189.4108.5063022.078602.297005.876904.83190HepG2XRN2
ZNF788ENSG00000214189.424.70160131.78200-2.415507.420406.63710HepG2ZNF622
ZNF788ENSG00000188474.690.2016026.253001.780602.890001.56250HepG2ZRANB2
ZNF788ENSG00000214189.442.69180112.86240-1.402502.965201.61900HepG2ZRANB2
ZNF788ENSG00000214189.4108.66930408.95590-1.9120026.5428023.46320K562CIRBP
ZNF788ENSG00000188474.655.136600.600106.521505.085702.65430K562YBX3
ZNF788ENSG00000188474.618.56210254.93970-3.7797010.499207.27810K562DDX28
ZNF788ENSG00000188474.661.76170243.20820-1.977405.346102.24550K562DDX52
ZNF788ENSG00000214189.411.33610185.54660-4.032806.898103.62070K562DDX55
ZNF788ENSG00000188474.630.17260255.09650-3.0797010.104107.96130K562EIF3D
ZNF788ENSG00000188474.6105.976205.058204.388905.484403.13250K562ESF1
ZNF788ENSG00000214189.4249.55060452.95000-0.860005.636103.25300K562ESF1
ZNF788ENSG00000214189.4314.30120425.98210-0.438602.405201.61490K562FIP1L1
ZNF788ENSG00000188474.60.00000297.86230-99999.999995.178603.72390K562HNRNPA1
ZNF788ENSG00000188474.64.01210329.67630-6.360503.488802.48740K562HNRNPU
ZNF788ENSG00000214189.497.75620381.67480-1.965106.976705.04620K562IGF2BP2
ZNF788ENSG00000214189.4275.37210388.17300-0.495302.445201.34540K562IGF2BP3
ZNF788ENSG00000188474.6291.63360105.273801.4699012.129308.65990K562KHSRP
ZNF788ENSG00000214189.4242.91230385.75080-0.667203.986001.65880K562KHSRP
ZNF788ENSG00000214189.4250.22860552.71030-1.143304.382701.93620K562CCAR2
ZNF788ENSG00000188474.6277.83910109.395401.344609.864708.21460K562MAGOH
ZNF788ENSG00000214189.4224.44820401.02150-0.837307.491306.08240K562MAGOH
ZNF788ENSG00000188474.6245.01420109.179901.166108.272106.57860K562MATR3
ZNF788ENSG00000214189.4176.31910400.19220-1.1825013.3566011.22860K562MATR3
ZNF788ENSG00000188474.652.41060235.22540-2.166102.703901.43290K562NONO
ZNF788ENSG00000188474.6130.42730283.59320-1.120608.256905.22520K562PABPC4
ZNF788ENSG00000188474.6257.18700106.913401.266304.177002.49060K562PCBP1
ZNF788ENSG00000214189.4182.32380392.04630-1.1045011.976409.21590K562PCBP1
ZNF788ENSG00000188474.60.00000231.97740-99999.9999926.6082024.29140K562PRPF8
ZNF788ENSG00000188474.60.00000115.38100-99999.999995.704804.33130K562PSIP1
ZNF788ENSG00000188474.60.97030106.28120-6.7752032.5798030.38170K562PTBP1
ZNF788ENSG00000188474.6130.17510300.23780-1.205706.305603.51650K562QKI
ZNF788ENSG00000188474.6235.0757099.348701.242503.607001.95710K562RBM34
ZNF788ENSG00000214189.4203.97820364.18080-0.836206.282904.00690K562RBM34
ZNF788ENSG00000188474.6329.33960107.264201.6183017.4164014.78000K562NELFE
ZNF788ENSG00000214189.4117.69860393.11220-1.7398021.8509018.95980K562NELFE
ZNF788ENSG00000188474.694.83010272.39980-1.5223013.6506010.19910K562RECQL
ZNF788ENSG00000188474.655.99270236.19410-2.076705.611304.44630K562RPS19
ZNF788ENSG00000188474.6161.87600278.98980-0.785305.603004.35910K562SF3B4
ZNF788ENSG00000214189.4338.3323089.433201.919506.941704.50720K562SFPQ
ZNF788ENSG00000188474.614.44420370.39820-4.680503.890902.34290K562SNRNP200
ZNF788ENSG00000188474.60.0000099.96870-99999.999995.369303.80020K562SRFBP1
ZNF788ENSG00000214189.4266.22980381.97430-0.520803.056602.31670K562SRSF1
ZNF788ENSG00000214189.4196.79590360.77470-0.874402.473301.48720K562SRSF5
ZNF788ENSG00000188474.6294.7636077.660101.924207.725505.77580K562SRSF7
ZNF788ENSG00000214189.450.90400281.86340-2.469109.362607.19260K562SRSF7
ZNF788ENSG00000188474.6307.670506.225305.627004.034902.37510K562SSRP1
ZNF788ENSG00000188474.6313.550005.689305.784203.884502.35950K562STAU1
ZNF788ENSG00000214189.4124.96900511.17950-2.032304.283102.66210K562STAU1
ZNF788ENSG00000188474.66.34000224.42370-5.1456018.3574015.76430K562SUPV3L1
ZNF788ENSG00000214189.4259.84740118.944401.127302.474301.51870K562SUPV3L1
ZNF788ENSG00000214189.4280.66050386.55780-0.461902.509301.83280K562TARDBP
ZNF788ENSG00000188474.6178.44590279.67410-0.648303.495401.69080K562TBRG4
ZNF788ENSG00000214189.4245.85300372.88520-0.600903.355502.44240K562TIA1
ZNF788ENSG00000188474.612.03790110.95200-3.204302.277701.43450K562TIAL1
ZNF788ENSG00000188474.60.00000118.10390-99999.999995.879404.38410K562TRIM56
ZNF788ENSG00000188474.6141.45900260.06100-0.878504.996103.43770K562U2AF1
ZNF788ENSG00000188474.638.72200434.04000-3.486607.544305.33830K562UBE2L3
ZNF788ENSG00000214189.4942.65920590.341100.675103.460201.87670K562UBE2L3
ZNF788ENSG00000188474.6134.03640237.61520-0.826002.343501.41510K562UCHL5
ZNF788ENSG00000188474.60.00000391.49150-99999.999994.015302.45410K562WRN
ZNF788ENSG00000188474.6129.37020242.10130-0.904102.587701.43390K562XRN2
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for ZNF788 is not available on ENCORE database.





10 RBPs can affect the splicing of ZNF788 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEZNF788ENSG00000188474.6chr19+1222144812221509122211191222124612222060122254910.272000.000060.02707includedK562PUM1
SEZNF788ENSG00000188474.6chr19+122214481222150912221119122212461222206012225491-0.560000.000620.00939excludedHepG2U2AF2
SEZNF788ENSG00000188474.6chr19+1220465012204710122030771220328512221119122212460.158000.007400.06397includedK562AQR
SEZNF788ENSG00000188474.6chr19+122211191222124612203077122032851222206012225491-0.246000.003590.03542excludedK562AQR
SEZNF788ENSG00000188474.6chr19+1222144812221509122211191222124612222060122254910.497000.000020.02552includedK562SSB
SEZNF788ENSG00000188474.6chr19+1222144812221509122211191222124612222060122254910.242000.000080.05586includedK562PUM2
SEZNF788ENSG00000188474.6chr19+122211191222124612203077122032851222206012225491-0.310000.002310.07105excludedK562HNRNPU
SEZNF788ENSG00000188474.6chr19+1222144812221509122211191222124612222060122254910.376000.007560.09507includedK562HNRNPC
SEZNF788ENSG00000188474.6chr19+1220465012204710122030771220328512221119122212460.644000.000000.00000includedK562HNRNPC
MXEZNF788ENSG00000188474.6chr19+12221119122212461222144812221509122030771220328512222060122254910.499000.000440.010081includedHepG2HNRNPUL1
MXEZNF788ENSG00000188474.6chr19+1222111912221246122214481222150912203077122032851222206012225491-0.706000.000030.010702includedK562METAP2
MXEZNF788ENSG00000188474.6chr19+1222111912221252122214211222150912203077122032851222206012225491-0.449000.004000.090402includedK562TAF15
MXEZNF788ENSG00000188474.6chr19+1222111912221246122214211222150912203077122032851222206012225491-0.295000.001960.058002includedK562TAF15

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for ZNF788 is not avaliable on ENCORE database.