VGLL4

General Information

Gene Name       : VGLL4
Gene ID             : ENSG00000144560.14
Essential Gene : No

Functions

Localization

Domains (AlphaFold: VGLL4)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878VGLL4ENSG00000144560.146.6710.878.77ENCSR000AEF
HepG2VGLL4ENSG00000144560.1425.5619.0522.30ENCSR985KAT
K562VGLL4ENSG00000144560.145.676.416.04ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for VGLL4 is not avaliable on ENCORE database.



Proteins bound to RNA
  • VGLL4 RNA is bound by 30 proteins.  







eCLIP assay for VGLL4 is not avaliable on ENCORE database.





30 proteins are bound to VGLL4 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr31159898911599039-3'-UTR,intron-Distal4.115023.31982HepG2IGF2BP1
chr31164338411643563-3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal3.065466.93018HepG2BUD13
chr31160083711601010-3'-UTR,CDS,intron-Distal,intron-Proximal3.534707.68851HepG2AQR
chr31160627311606396-3'-UTR,CDS,intron-Distal,intron-Proximal3.394994.25541HepG2GRWD1
chr31160619411606284-3'-UTR,CDS,intron-Distal,intron-Proximal4.016274.45914HepG2PRPF8
chr31160641011606495-3'-UTR,CDS,intron-Distal,intron-Proximal3.309084.16939HepG2PPIG
chr31159990111599945-3'-UTR,intron-Distal,intron-Proximal3.581354.06897HepG2FAM120A
chr31164343311643577-3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal4.940895.68078HepG2AQR
chr31159838711598438-3'-UTR,intron-Distal3.556733.95400K562UPF1
chr31159761511597670-3'-UTR,intron-Distal6.2069916.19343K562PUM2
chr31159982611599921-3'-UTR,intron-Distal,intron-Proximal3.690136.04024K562UPF1
chr31159950911599606-3'-UTR,intron-Distal,intron-Proximal4.904487.78973K562TARDBP
chr31159978911599926-3'-UTR,intron-Distal,intron-Proximal5.230317.71000K562FAM120A
chr31159855911598615-3'-UTR,intron-Distal4.451576.86851K562FAM120A
chr31160643911606508-3'-UTR,CDS,intron-Distal,intron-Proximal3.873015.62957HepG2BUD13
chr31159800011598155-3'-UTR,intron-Distal4.893537.41486HepG2FUBP3
chr31159982411599942-3'-UTR,intron-Distal,intron-Proximal3.057513.23829HepG2FUS
chr31159982611599918-3'-UTR,intron-Distal,intron-Proximal3.935064.13343HepG2FUBP3
chr31168501011685132-5'-UTR,intron-Distal4.969536.51775HepG2FUBP3
chr31168483411684979-CDS,intron-Distal4.732516.03362HepG2AQR
chr31160610311606156-intron-Distal,intron-Proximal3.831717.83642HepG2BUD13
chr31164645711646527-intron-Distal5.502699.20567HepG2FAM120A
chr31163042511630479-intron-Distal4.390793.67987HepG2DKC1
chr31163613511636206-intron-Distal3.601835.09669HepG2QKI
chr31160610211606166-intron-Distal,intron-Proximal5.030318.15571HepG2GTF2F1
chr31162133911621441-intron-Distal4.773144.68055HepG2CSTF2T
chr31162545511625490-intron-Distal3.350893.68481HepG2HNRNPM
chr31171444311714548-intron-Distal4.713345.37406HepG2HNRNPM
chr31161613411616332-intron-Distal4.163874.71638K562HNRNPL
chr31160252511602618-intron-Distal3.855336.73995HepG2CSTF2T
chr31160606911606167-intron-Distal,intron-Proximal5.6232014.38130HepG2PRPF4
chr31160466811604748-intron-Distal3.740276.10842HepG2CSTF2T
chr31161461911614712-intron-Distal5.1440126.20291HepG2PTBP1
chr31162113711621217-intron-Distal5.7748114.70961HepG2RBFOX2
chr31164323511643287-intron-Distal,intron-Proximal4.012033.61881HepG2TIAL1
chr31160529511605373-intron-Distal3.177673.18011HepG2FAM120A
chr31160607611606162-intron-Distal,intron-Proximal5.6291419.04793HepG2EFTUD2
chr31161462211614710-intron-Distal5.524608.42544K562PTBP1
chr31163206911632144-intron-Distal3.444525.88747HepG2HNRNPL
chr31164645811646520-intron-Distal4.555865.25929HepG2GTF2F1
chr31162132211621441-intron-Distal3.194556.63958HepG2CSTF2
chr31160608811606145-intron-Distal,intron-Proximal4.901033.65355K562EFTUD2
chr31167239311672503-intron-Distal3.989434.69053HepG2SFPQ
chr31167535111675440-intron-Distal3.747898.51339HepG2QKI
chr31166142111661508-intron-Distal4.3675910.78806HepG2QKI
chr31163320811633307-intron-Distal4.550865.42395HepG2HNRNPM
chr31168447211684543-intron-Distal3.812615.51953HepG2SFPQ
chr31165253711652622-intron-Distal4.060108.08956HepG2PCBP2
chr31168482611684897-intron-Distal3.580484.83899HepG2PRPF8
chr31164646211646526-intron-Distal4.217138.54991HepG2CSTF2T
chr31161615511616239-intron-Distal3.442944.88448HepG2HNRNPL
chr31161581011615900-intron-Distal4.572796.62423HepG2XPO5
chr31164138611641443-intron-Distal4.654434.20763HepG2U2AF2
chr31160610511606177-intron-Distal,intron-Proximal3.997199.88663HepG2FAM120A
chr31166631111666362-intron-Distal4.093613.62366HepG2HNRNPM
chr31168446811684583-intron-Distal4.194064.08332K562NONO
chr31163037411630425-intron-Distal5.718117.30436HepG2DKC1
chr31164646411646528-intron-Distal4.252973.86417HepG2PRPF4
chr31168480211684884-intron-Distal3.085515.84909HepG2RBM22
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for VGLL4 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for VGLL4 is not available on ENCORE database.

  • 90 RBPs can affect the levels of VGLL4.  








The Knockdown/knockout RNA-Seq assay for VGLL4 is not available on ENCORE database.





90 RBPs can affect the gene expression of VGLL4 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
VGLL4ENSG00000144560.91150.86430837.177100.459004.050902.77850HepG2AATF
VGLL4ENSG00000144560.92291.607901085.998001.0772046.1460044.41950HepG2ACO1
VGLL4ENSG00000144560.91983.230101225.429700.694506.864906.06890HepG2AKAP1
VGLL4ENSG00000144560.92328.172501013.921201.1992022.8757020.92000HepG2ASCC1
VGLL4ENSG00000144560.92079.078701444.376600.5254010.870709.65960HepG2AUH
VGLL4ENSG00000144560.91174.78310809.927000.536404.321803.22120HepG2BCLAF1
VGLL4ENSG00000144560.91420.41470993.814200.515206.702105.57040HepG2CALR
VGLL4ENSG00000144560.91531.63750963.301000.668907.493806.26950HepG2CIRBP
VGLL4ENSG00000144560.91737.430301145.780300.600503.701202.81070HepG2CNOT7
VGLL4ENSG00000144560.91471.957501092.334200.430204.336802.96750HepG2CPSF7
VGLL4ENSG00000144560.91445.328001237.861300.223401.906801.35430HepG2CELF1
VGLL4ENSG00000144560.91098.64710886.533100.309402.729001.57740HepG2DDX1
VGLL4ENSG00000144560.9627.928201173.82810-0.9025010.912009.74670HepG2DDX3X
VGLL4ENSG00000144560.91090.91680746.405900.547403.879802.29640HepG2DDX52
VGLL4ENSG00000144560.92168.406101198.291300.855606.147904.71950HepG2DDX59
VGLL4ENSG00000144560.92142.242701008.438701.0869016.0111014.68720HepG2DDX6
VGLL4ENSG00000144560.91160.35960861.608000.429406.792805.83480HepG2DNAJC2
VGLL4ENSG00000144560.91334.57060969.341300.461203.582102.91190HepG2EIF2S1
VGLL4ENSG00000144560.91560.458501043.041700.581104.041703.21740HepG2EIF4B
VGLL4ENSG00000144560.92563.224401658.354300.6281015.5376014.30360HepG2ETF1
VGLL4ENSG00000144560.91578.910501061.212200.573107.577306.19930HepG2EWSR1
VGLL4ENSG00000144560.9686.60170880.58130-0.359002.484801.39730HepG2FASTKD2
VGLL4ENSG00000144560.92484.535501339.350500.8913011.7481010.31780HepG2FIP1L1
VGLL4ENSG00000144560.9525.903601056.96340-1.007104.912703.56660HepG2FTO
VGLL4ENSG00000144560.91552.336101030.140300.591504.135802.77960HepG2FUS
VGLL4ENSG00000144560.91455.110301080.925300.428803.345802.58850HepG2FXR1
VGLL4ENSG00000144560.9965.047201184.50930-0.295602.912902.17820HepG2HNRNPF
VGLL4ENSG00000144560.91258.948201015.438500.310002.062401.45360HepG2HNRNPK
VGLL4ENSG00000144560.91969.449501212.556700.6996021.5183019.81460HepG2HNRNPL
VGLL4ENSG00000144560.91383.99290969.739500.513109.061308.01170HepG2HNRNPU
VGLL4ENSG00000144560.9754.654201166.40630-0.628208.410207.21150HepG2IGF2BP1
VGLL4ENSG00000144560.91546.46660956.523000.693002.636101.67810HepG2IGF2BP3
VGLL4ENSG00000144560.91186.91930990.557700.260803.116302.34190HepG2ILF2
VGLL4ENSG00000144560.9698.688001091.73370-0.643905.128903.43640HepG2KHDRBS1
VGLL4ENSG00000144560.91262.66050756.186000.739604.426503.11230HepG2METAP2
VGLL4ENSG00000144560.91360.865501083.991600.328102.781301.97120HepG2MSI2
VGLL4ENSG00000144560.9621.366601112.92680-0.840809.304308.18300HepG2NCBP2
VGLL4ENSG00000144560.91867.282701319.909100.500407.296506.07080HepG2NOL12
VGLL4ENSG00000144560.91437.55950959.882400.5826010.708309.22310HepG2PARN
VGLL4ENSG00000144560.91430.141001012.349200.498408.363507.40210HepG2PCBP1
VGLL4ENSG00000144560.91103.21530908.925600.279402.631401.87470HepG2PRPF4
VGLL4ENSG00000144560.9926.76440706.984800.390402.524601.75170HepG2PRPF8
VGLL4ENSG00000144560.92036.037301030.124200.9828032.2089030.75160HepG2PTBP1
VGLL4ENSG00000144560.91044.756801259.94280-0.270201.977401.46220HepG2PUF60
VGLL4ENSG00000144560.91648.927701337.454600.301904.469703.75530HepG2PUM1
VGLL4ENSG00000144560.91954.996901106.159100.8215026.1055024.57090HepG2PUS1
VGLL4ENSG00000144560.91873.268001115.605000.7476015.1471013.85170HepG2QKI
VGLL4ENSG00000144560.91626.10330940.818900.789305.148004.20210HepG2RAVER1
VGLL4ENSG00000144560.91765.873201399.341800.335503.600102.63590HepG2RBM15
VGLL4ENSG00000144560.92586.252101386.073800.8998026.3910025.11940HepG2RBM22
VGLL4ENSG00000144560.91301.630001012.500200.362303.246702.52190HepG2RBM25
VGLL4ENSG00000144560.91515.329601146.411800.402405.092104.39490HepG2NELFE
VGLL4ENSG00000144560.9859.538901275.96510-0.570006.185005.22030HepG2RPLP0
VGLL4ENSG00000144560.91171.70570703.265800.736404.249303.50210HepG2RPS19
VGLL4ENSG00000144560.91334.621701068.899300.320202.024401.33300HepG2RPS2
VGLL4ENSG00000144560.9841.860901150.50510-0.450602.610501.83410HepG2RPS3A
VGLL4ENSG00000144560.91148.55910699.356800.715606.738405.57160HepG2RRP9
VGLL4ENSG00000144560.91556.595301072.454500.537409.483208.48760HepG2SF3B4
VGLL4ENSG00000144560.92598.496301565.513200.7309023.9746022.87700HepG2SRFBP1
VGLL4ENSG00000144560.91358.428601119.425700.279102.995302.50820HepG2SRSF1
VGLL4ENSG00000144560.91690.398301243.973600.442307.062806.12650HepG2SRSF5
VGLL4ENSG00000144560.9955.700401163.73170-0.284102.711002.02160HepG2SRSF7
VGLL4ENSG00000144560.91547.74130910.725700.7650019.9355018.70180HepG2SRSF9
VGLL4ENSG00000144560.91114.723801359.22530-0.286103.268002.72160HepG2SSB
VGLL4ENSG00000144560.92382.038101414.771900.7515025.1437023.57760HepG2SUCLG1
VGLL4ENSG00000144560.91255.78710912.308700.460903.198402.47780HepG2SUPV3L1
VGLL4ENSG00000144560.9805.563301112.45380-0.465702.350501.67520HepG2TARDBP
VGLL4ENSG00000144560.9980.39430611.493100.680906.438105.02700HepG2TFIP11
VGLL4ENSG00000144560.9735.08970924.53940-0.330802.552901.74690HepG2TIA1
VGLL4ENSG00000144560.9718.50930942.30200-0.391203.583803.03010HepG2TIAL1
VGLL4ENSG00000144560.91539.401701145.732400.426003.573002.86330HepG2U2AF1
VGLL4ENSG00000144560.91809.156301177.727400.6192014.9902013.61510HepG2UPF1
VGLL4ENSG00000144560.91562.141801210.544600.367804.827903.48480HepG2UTP18
VGLL4ENSG00000144560.91598.710401137.050600.491508.785007.81560HepG2UTP3
VGLL4ENSG00000144560.9603.74460481.780400.325502.205301.68910K562AGGF1
VGLL4ENSG00000144560.9717.84500501.306100.517904.126203.32590K562AKAP8L
VGLL4ENSG00000144560.9484.71940692.74120-0.515203.943402.42240K562APOBEC3C
VGLL4ENSG00000144560.9741.83690525.975200.496004.835203.59190K562ATP5C1
VGLL4ENSG00000144560.9840.31300583.646400.525706.195604.50600K562CPEB4
VGLL4ENSG00000144560.9734.58310965.28730-0.394003.267902.20870K562CELF1
VGLL4ENSG00000144560.9681.95930539.492900.338002.510001.67970K562DKC1
VGLL4ENSG00000144560.9628.19650398.255800.657407.384306.29170K562EIF2S2
VGLL4ENSG00000144560.9558.19020371.314600.588004.624403.50710K562FIP1L1
VGLL4ENSG00000144560.9235.65910357.03030-0.599303.451902.78720K562FXR1
VGLL4ENSG00000144560.9179.83690280.85070-0.643103.221601.66810K562GEMIN5
VGLL4ENSG00000144560.9203.09880361.76720-0.832906.204005.34580K562HNRNPC
VGLL4ENSG00000144560.9194.21830305.44840-0.653203.143102.14610K562HNRNPM
VGLL4ENSG00000144560.9666.13220528.279200.334402.413601.57850K562HNRNPU
VGLL4ENSG00000144560.9806.15260532.039900.599405.758604.46770K562KIF1C
VGLL4ENSG00000144560.9903.10970596.015100.599506.053104.60710K562MBNL1
VGLL4ENSG00000144560.9621.72770417.760900.573503.175202.21800K562NAA15
VGLL4ENSG00000144560.9228.66140342.78570-0.584103.529102.12760K562NCBP2
VGLL4ENSG00000144560.9606.82300806.68960-0.410703.045301.54060K562PNPT1
VGLL4ENSG00000144560.9283.55920373.13930-0.396102.217701.61290K562PTBP1
VGLL4ENSG00000144560.9660.17990497.217100.408902.279401.77680K562PUS1
VGLL4ENSG00000144560.9767.55480484.414200.663907.789906.82490K562RBM15
VGLL4ENSG00000144560.9205.59890296.04620-0.526002.705101.72420K562RCC2
VGLL4ENSG00000144560.9645.56390500.939300.365802.484301.65300K562WDR3
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for VGLL4 is not available on ENCORE database.





1 RBPs can affect the splicing of VGLL4 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
RIVGLL4ENSG00000144560.9chr3-116849101168539811684910116851171168520311685398-0.158000.000440.02565excludedHepG2HNRNPC

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for VGLL4 is not avaliable on ENCORE database.