TXNDC16

General Information

Gene Name       : TXNDC16
Gene ID             : ENSG00000087301.8
Essential Gene : No

Functions

Localization

Domains (AlphaFold: TXNDC16)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878TXNDC16ENSG00000087301.84.973.774.37ENCSR000AEF
HepG2TXNDC16ENSG00000087301.82.315.193.75ENCSR985KAT
K562TXNDC16ENSG00000087301.82.833.313.07ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for TXNDC16 is not avaliable on ENCORE database.



Proteins bound to RNA
  • TXNDC16 RNA is bound by 8 proteins.  







eCLIP assay for TXNDC16 is not avaliable on ENCORE database.





8 proteins are bound to TXNDC16 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr145301905653019161-5'-UTR,intron-Distal4.535188.20930HepG2DDX3X
chr145298594552986003-CDS,intron-Distal4.130113.38968HepG2BCLAF1
chr145294953752949630-CDS,intron-Distal,intron-Proximal3.587264.49347K562UCHL5
chr145294960652949671-CDS,intron-Distal3.255563.36945K562ZNF622
chr145300431553004379-CDS,intron-Distal,intron-Proximal4.031833.20027K562ZNF622
chr145290600252906074-CDS,intron-Distal4.010013.25175K562YBX3
chr145300924053009317-intron-Distal,intron-Proximal4.166263.89294K562KHSRP
chr145294550852945549-intron-Distal4.457254.48623K562EXOSC5
chr145294699052947018-intron-Distal4.373093.30696K562EXOSC5
chr145294584452945891-intron-Distal5.190088.69609K562EXOSC5
chr145294611952946205-intron-Distal4.540307.61413K562EXOSC5
chr145294941952949510-intron-Distal,intron-Proximal4.682846.27552K562KHSRP
chr145294297552943019-intron-Distal5.067538.03988K562EXOSC5
chr145300973053009846-intron-Distal4.378317.06206K562QKI
chr145294320652943237-intron-Distal4.014993.30687K562EXOSC5
chr145294519152945242-intron-Distal4.647669.39985K562EXOSC5
chr145301000853010074-intron-Distal,intron-Proximal3.309074.52210K562KHSRP
chr145294930052949419-intron-Distal4.662205.62025K562KHSRP
chr145292688752926943-intron-Distal3.428794.02241K562EXOSC5
chr145294395652944022-intron-Distal4.304824.48560K562EXOSC5
chr145292564152925717-intron-Distal3.208503.15041K562EXOSC5
chr145297243552972483-intron-Distal4.111313.30687K562EXOSC5
chr145298216752982244-intron-Distal5.763009.13109K562QKI
chr145294533452945383-intron-Distal4.714545.76606K562EXOSC5
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for TXNDC16 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for TXNDC16 is not available on ENCORE database.

  • 111 RBPs can affect the levels of TXNDC16.  








The Knockdown/knockout RNA-Seq assay for TXNDC16 is not available on ENCORE database.





111 RBPs can affect the gene expression of TXNDC16 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
TXNDC16ENSG00000087301.4112.79330271.54630-1.267505.450904.65370HepG2ACO1
TXNDC16ENSG00000087301.4391.37850627.84840-0.681901.958801.50230HepG2AKAP1
TXNDC16ENSG00000087301.4102.58550229.47320-1.161505.560304.21350HepG2BCCIP
TXNDC16ENSG00000087301.4117.62740199.42600-0.761602.554901.68990HepG2BCLAF1
TXNDC16ENSG00000087301.490.30980204.58120-1.179703.278602.63340HepG2BOP1
TXNDC16ENSG00000087301.4137.32230297.18550-1.113809.182607.89790HepG2CALR
TXNDC16ENSG00000087301.4303.85730493.58190-0.699902.089501.41120HepG2CIRBP
TXNDC16ENSG00000087301.4139.54740271.58710-0.960703.671902.92450HepG2CKAP4
TXNDC16ENSG00000087301.4149.56770247.95480-0.729303.790402.50110HepG2CPSF7
TXNDC16ENSG00000087301.4177.33330369.00370-1.0572011.3577010.22930HepG2CELF1
TXNDC16ENSG00000087301.4496.52810396.834700.323202.058801.40600HepG2DAZAP1
TXNDC16ENSG00000087301.495.77580273.66360-1.5147013.5792012.21590HepG2DDX21
TXNDC16ENSG00000087301.4363.88210267.714500.442702.311701.48450HepG2DDX24
TXNDC16ENSG00000087301.470.01670225.60330-1.6880010.284008.90550HepG2DDX55
TXNDC16ENSG00000087301.4180.72930516.49390-1.514905.824304.95790HepG2DDX6
TXNDC16ENSG00000087301.4119.73440239.49040-1.000108.150607.10430HepG2DNAJC2
TXNDC16ENSG00000087301.4306.65230496.74930-0.695902.036101.51810HepG2EIF2S1
TXNDC16ENSG00000087301.4139.52790228.39820-0.711003.488302.17580HepG2EIF2S2
TXNDC16ENSG00000087301.4119.61970234.21360-0.969405.213604.00270HepG2EIF3D
TXNDC16ENSG00000087301.4336.20840549.07820-0.707702.016601.46830HepG2EIF4A3
TXNDC16ENSG00000087301.4253.83860534.39130-1.074003.432002.66860HepG2EIF4B
TXNDC16ENSG00000087301.4576.20990374.989900.619603.380202.48520HepG2EIF4G2
TXNDC16ENSG00000087301.4228.19390409.41360-0.843308.535207.57930HepG2ETF1
TXNDC16ENSG00000087301.4177.87700260.74630-0.551802.740601.60130HepG2FASTKD2
TXNDC16ENSG00000087301.4249.01710553.65850-1.152803.869703.06050HepG2FXR1
TXNDC16ENSG00000087301.4135.38310208.53620-0.623302.634301.76200HepG2GEMIN5
TXNDC16ENSG00000087301.4121.79800290.03010-1.251708.656506.85410HepG2GNB2L1
TXNDC16ENSG00000087301.4193.49230321.22960-0.731303.468201.70660HepG2GTF2F1
TXNDC16ENSG00000087301.4249.82410364.67100-0.545703.980202.89210HepG2HNRNPA2B1
TXNDC16ENSG00000087301.4327.61660519.83070-0.666002.087401.47470HepG2HNRNPK
TXNDC16ENSG00000087301.4115.36550209.76330-0.862604.559203.37170HepG2HNRNPM
TXNDC16ENSG00000087301.4303.05290522.30690-0.785302.383201.75090HepG2IGF2BP2
TXNDC16ENSG00000087301.4112.51970275.32490-1.2910013.5183012.02910HepG2ILF2
TXNDC16ENSG00000087301.4194.67260288.24740-0.566302.531701.40440HepG2KHDRBS1
TXNDC16ENSG00000087301.4294.02860427.55060-0.540102.702501.88270HepG2LARP4
TXNDC16ENSG00000087301.4249.52530553.85030-1.150304.058703.26580HepG2MAGOH
TXNDC16ENSG00000087301.4106.58550557.00520-2.385709.861608.72660HepG2MATR3
TXNDC16ENSG00000087301.4122.90550245.12380-0.996004.171602.89170HepG2METAP2
TXNDC16ENSG00000087301.4137.32130246.06320-0.841504.612303.58810HepG2MSI2
TXNDC16ENSG00000087301.4291.15660570.17050-0.969603.201202.52250HepG2NCBP2
TXNDC16ENSG00000087301.4247.48850393.49700-0.669005.597104.51890HepG2NOL12
TXNDC16ENSG00000087301.4179.84540266.79540-0.569003.271602.35850HepG2PARN
TXNDC16ENSG00000087301.4178.26030322.71140-0.856304.734903.40340HepG2PCBP2
TXNDC16ENSG00000087301.490.29270174.12430-0.947403.568902.66340HepG2PRPF8
TXNDC16ENSG00000087301.4211.76640427.23390-1.0126011.8292010.85430HepG2PTBP1
TXNDC16ENSG00000087301.4245.00930375.60920-0.616404.178103.46310HepG2PUF60
TXNDC16ENSG00000087301.4235.97130398.70460-0.756708.212907.30460HepG2PUM1
TXNDC16ENSG00000087301.4271.54560398.42650-0.553103.212802.48970HepG2PUM2
TXNDC16ENSG00000087301.4165.21160311.43730-0.914604.071403.22510HepG2RAVER1
TXNDC16ENSG00000087301.4204.35010332.92810-0.704205.228004.09340HepG2RBM15
TXNDC16ENSG00000087301.4223.39010342.19200-0.615204.239503.63330HepG2RBM22
TXNDC16ENSG00000087301.4539.34870419.941900.360902.106501.51210HepG2RBM25
TXNDC16ENSG00000087301.4232.19330342.51090-0.560802.440601.51540HepG2RBM27
TXNDC16ENSG00000087301.4336.55760475.47580-0.498503.749003.13760HepG2NELFE
TXNDC16ENSG00000087301.4130.38280196.96210-0.595202.366601.72700HepG2RPLP0
TXNDC16ENSG00000087301.479.58950227.90370-1.5178011.8984010.72960HepG2RPS19
TXNDC16ENSG00000087301.4159.86180315.91250-0.982706.338005.15740HepG2RPS2
TXNDC16ENSG00000087301.4210.58240303.75970-0.528502.180301.46970HepG2RPS3A
TXNDC16ENSG00000087301.4159.79200286.04150-0.840004.640502.94750HepG2SART3
TXNDC16ENSG00000087301.4151.38310228.73130-0.595502.588301.67900HepG2SERBP1
TXNDC16ENSG00000087301.4239.32470364.25510-0.606003.165702.44390HepG2SF3A3
TXNDC16ENSG00000087301.4185.15840444.81740-1.2645016.7008015.43470HepG2SF3B4
TXNDC16ENSG00000087301.4105.25470303.83770-1.529407.791905.33790HepG2SLTM
TXNDC16ENSG00000087301.4146.86520279.92030-0.930507.993006.99040HepG2SMN1
TXNDC16ENSG00000087301.4191.16690317.47680-0.731803.907602.75130HepG2SMNDC1
TXNDC16ENSG00000087301.4182.60540370.83400-1.0220011.033509.89720HepG2SRSF5
TXNDC16ENSG00000087301.4195.40650377.71910-0.9508010.381209.43050HepG2SRSF9
TXNDC16ENSG00000087301.4112.54900203.07500-0.851503.558002.16710HepG2STAU1
TXNDC16ENSG00000087301.4182.58260291.04200-0.672702.436001.31080HepG2SUB1
TXNDC16ENSG00000087301.4327.25460421.76210-0.366002.639002.02810HepG2SUCLG1
TXNDC16ENSG00000087301.4590.50690417.307100.500704.365703.68580HepG2TAF15
TXNDC16ENSG00000087301.474.15410150.56440-1.021803.790802.64350HepG2TFIP11
TXNDC16ENSG00000087301.4164.81510261.90140-0.668204.024403.44500HepG2TIAL1
TXNDC16ENSG00000087301.4123.73950264.24920-1.094609.995109.02490HepG2TRIM56
TXNDC16ENSG00000087301.4173.21150260.06740-0.586402.383201.79610HepG2U2AF1
TXNDC16ENSG00000087301.465.48510132.70210-1.019002.647601.90610HepG2UCHL5
TXNDC16ENSG00000087301.4173.96490323.03900-0.892908.021906.93540HepG2UPF1
TXNDC16ENSG00000087301.4122.52730205.74300-0.747702.195101.30680HepG2UPF2
TXNDC16ENSG00000087301.4126.59980311.88080-1.3007013.1831012.02070HepG2UTP3
TXNDC16ENSG00000087301.4314.00260187.892000.740806.009205.07920HepG2ZC3H8
TXNDC16ENSG00000087301.4215.15490355.28040-0.723603.643203.03920HepG2ZNF622
TXNDC16ENSG00000087301.4712.54310411.741400.791107.772405.74360K562ABCF1
TXNDC16ENSG00000087301.4473.42320313.670700.593805.208304.47010K562AGGF1
TXNDC16ENSG00000087301.4606.53310326.388800.893909.935708.59760K562AKAP8L
TXNDC16ENSG00000087301.4493.96560342.460800.528404.431503.24590K562ATP5C1
TXNDC16ENSG00000087301.41186.86200710.181100.7408011.562009.65000K562CELF1
TXNDC16ENSG00000087301.4520.17490368.021600.499103.383601.75930K562DDX19B
TXNDC16ENSG00000087301.4228.59990329.63100-0.528003.097701.99080K562DDX3X
TXNDC16ENSG00000087301.4393.71450244.920200.684703.826602.28560K562EEF2
TXNDC16ENSG00000087301.4196.44960314.55780-0.679202.801302.07860K562EIF2S2
TXNDC16ENSG00000087301.4241.34630344.38820-0.512902.566201.77650K562EIF4A3
TXNDC16ENSG00000087301.4745.07570577.672000.367003.307702.28270K562EIF4G2
TXNDC16ENSG00000087301.4234.54750358.15010-0.610704.321103.58900K562FXR1
TXNDC16ENSG00000087301.4578.58940352.488800.714904.766303.78060K562G3BP2
TXNDC16ENSG00000087301.4430.96010290.937800.566704.516903.06380K562GLRX3
TXNDC16ENSG00000087301.4606.28170346.679100.806304.179601.97220K562HNRNPA0
TXNDC16ENSG00000087301.4536.29580282.332400.925504.080902.51120K562HNRNPA2B1
TXNDC16ENSG00000087301.4121.61870243.41650-1.001105.602904.21420K562HNRNPM
TXNDC16ENSG00000087301.4304.54020411.85020-0.435502.602201.45870K562IGF2BP3
TXNDC16ENSG00000087301.4647.98730346.379300.903503.744002.76450K562KIF1C
TXNDC16ENSG00000087301.4199.73840296.45920-0.569702.953801.44490K562LIN28B
TXNDC16ENSG00000087301.4271.36240425.62630-0.649405.170504.01310K562MAGOH
TXNDC16ENSG00000087301.4304.41840424.78360-0.480703.122202.13880K562MATR3
TXNDC16ENSG00000087301.4552.82770271.982701.023202.574601.72910K562NAA15
TXNDC16ENSG00000087301.4473.00270339.849400.476904.069203.18340K562NSUN2
TXNDC16ENSG00000087301.4421.17410246.879900.770502.796401.80040K562PABPN1
TXNDC16ENSG00000087301.4553.23000333.262600.731105.386404.22110K562PCBP3
TXNDC16ENSG00000087301.4397.77880255.619800.637904.754003.70330K562POLR2G
TXNDC16ENSG00000087301.4157.93990230.27690-0.544002.088101.43210K562PRPF8
TXNDC16ENSG00000087301.4179.69170261.95000-0.543802.239301.43320K562PSIP1
TXNDC16ENSG00000087301.4210.38100413.51230-0.9749010.313609.08860K562PTBP1
TXNDC16ENSG00000087301.4774.36040323.686501.2583017.2620015.94830K562PUS1
TXNDC16ENSG00000087301.4580.45570315.385100.8800010.838509.68860K562RBM15
TXNDC16ENSG00000087301.4259.10930396.58380-0.614104.235203.16810K562RBM22
TXNDC16ENSG00000087301.4251.05450397.29100-0.662203.322102.21600K562RPS3
TXNDC16ENSG00000087301.4397.85200235.445700.756704.171902.53350K562RRP9
TXNDC16ENSG00000087301.4236.97990366.38320-0.628604.636703.51900K562SF3B4
TXNDC16ENSG00000087301.4440.42040259.311200.764102.636301.44850K562SNRNP200
TXNDC16ENSG00000087301.4154.64900226.65180-0.551502.216601.31940K562SRFBP1
TXNDC16ENSG00000087301.4455.53400343.597300.406702.985402.01940K562SRPK2
TXNDC16ENSG00000087301.4286.09040405.36460-0.502703.037802.29940K562SRSF1
TXNDC16ENSG00000087301.4524.47280355.184900.562203.506202.06590K562STAU1
TXNDC16ENSG00000087301.4604.64810310.126900.963104.105802.22200K562SUPT6H
TXNDC16ENSG00000087301.4250.83930410.28850-0.709905.187604.20230K562TARDBP
TXNDC16ENSG00000087301.4286.95230395.76090-0.463802.746701.93240K562TIA1
TXNDC16ENSG00000087301.4458.13690308.338600.571204.339603.23450K562WDR3
TXNDC16ENSG00000087301.4932.14390521.278200.8384011.367309.48170K562ZC3H8
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for TXNDC16 is not available on ENCORE database.






No RBPs affect the alternative splcing events of TXNDC16 on ENCORE database.





The Knockdown/knockout RNA-Seq assay for TXNDC16 is not avaliable on ENCORE database.