TRA2B

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	TRA2B	ENSG00000136527.17	224.88	184.51	204.69	ENCSR000AEF
HepG2	TRA2B	ENSG00000136527.17	202.27	198.66	200.47	ENCSR985KAT
K562	TRA2B	ENSG00000136527.17	206.12	201.87	204.00	ENCSR000AEO

Assay Type	Exp_Name	ENCODE ID	Target label	Biosample	Status	Linked Antibody	Controls	Method	Note
RNA Bind-n-Seq	RBNS: TRA2B	ENCSR391FEW	TRA2B	cell-free sample	Released

GeneName	Cell_Line	Method	Exp_ID	Control_ID	Sample_reps	Control_reps	KD%	Status	Project	Note
TRA2B	K562	shRNA			BGKLV29-61,BGKLV29-62	BGKLV29-1,BGKLV29-2	on going ,on going	NotSatisfied	ENCODE3

GeneName	gene_aliases	Status	Project	Note
TRA2B	TRA2B		Released	ENCODE4

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for TRA2B is not avaliable on ENCORE database.

The binding motifs of TRA2B

Proteins bound to RNA

TRA2B RNA is bound by 42 proteins.

eCLIP assay for TRA2B is not avaliable on ENCORE database.

42 proteins are bound to TRA2B RNA:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr3	185637180	185637234	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.28311	23.23386	K562	AQR
chr3	185639857	185639921	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.24523	9.29110	K562	DDX24
chr3	185638855	185638988	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.38049	13.94233	HepG2	BUD13
chr3	185636146	185636229	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.37581	9.99818	HepG2	PPIG
chr3	185639845	185639919	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.40713	7.87154	HepG2	PPIG
chr3	185638874	185638929	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.85591	3.21539	HepG2	SRSF1
chr3	185644464	185644535	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.07337	14.44989	HepG2	U2AF2
chr3	185641679	185641777	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.18496	10.90260	HepG2	BCLAF1
chr3	185637180	185637231	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.06088	12.56570	K562	SF3B4
chr3	185637206	185637268	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.46651	7.50303	K562	UCHL5
chr3	185637174	185637262	-	3'-UTR,CDS,intron-Distal,intron-Proximal	4.58778	3.01090	HepG2	CDC40
chr3	185635047	185635107	-	3'-UTR,intron-Distal,intron-Proximal	3.66600	13.45735	K562	IGF2BP1
chr3	185641654	185641718	-	3'-UTR,CDS,intron-Distal,intron-Proximal	5.01739	5.22159	K562	SND1
chr3	185641615	185641667	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.75018	6.21391	K562	PUM2
chr3	185634558	185634622	-	3'-UTR,intron-Distal	3.54153	10.27880	K562	PABPC4
chr3	185635459	185635515	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.18948	8.13987	K562	DDX24
chr3	185641582	185641611	-	3'-UTR,CDS,intron-Distal,intron-Proximal	4.01171	14.80334	K562	PUM2
chr3	185639891	185639915	-	3'-UTR,CDS,intron-Distal,intron-Proximal	4.11866	14.79105	K562	PUM2
chr3	185638887	185638936	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.24682	4.89070	K562	UCHL5
chr3	185636175	185636228	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.07344	3.16615	HepG2	G3BP1
chr3	185636146	185636200	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.77444	13.11799	K562	DDX24
chr3	185637189	185637272	-	3'-UTR,CDS,intron-Distal,intron-Proximal	5.00319	21.42646	HepG2	AQR
chr3	185638850	185638897	-	3'-UTR,CDS,intron-Distal,intron-Proximal	5.03753	6.57024	HepG2	AQR
chr3	185638934	185639023	-	3'-UTR,CDS,intron-Distal,intron-Proximal	4.95876	12.86345	HepG2	AQR
chr3	185637177	185637234	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.47392	6.99200	HepG2	EFTUD2
chr3	185637185	185637266	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.48633	6.53290	HepG2	BUD13
chr3	185643397	185643471	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.27872	6.00009	K562	SF3B4
chr3	185637188	185637321	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.33273	17.21829	K562	GPKOW
chr3	185637272	185637329	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.30616	8.87150	K562	SF3B4
chr3	185635476	185635606	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.52153	6.53375	HepG2	AQR
chr3	185644404	185644438	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.30577	9.03599	HepG2	GRWD1
chr3	185644463	185644549	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.64409	6.57821	HepG2	AQR
chr3	185635455	185635518	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.87590	12.80995	HepG2	BCLAF1
chr3	185637210	185637266	-	3'-UTR,CDS,intron-Distal,intron-Proximal	4.68371	62.40334	HepG2	PRPF8
chr3	185635285	185635350	-	3'-UTR,intron-Distal	6.03562	17.62510	HepG2	SUB1
chr3	185639871	185639934	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.80157	5.00154	HepG2	AQR
chr3	185643208	185643253	-	3'-UTR,CDS,intron-Distal,intron-Proximal	5.20803	12.21485	K562	AQR
chr3	185641573	185641607	-	3'-UTR,CDS,intron-Distal,intron-Proximal	4.68645	5.87377	HepG2	PPIG
chr3	185638825	185638905	-	3'-UTR,CDS,intron-Distal,intron-Proximal	4.34547	9.71879	K562	SF3B4
chr3	185639825	185639864	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.33434	5.73981	HepG2	GRWD1
chr3	185634873	185634924	-	3'-UTR,intron-Distal,intron-Proximal	4.12149	4.26925	HepG2	KHSRP
chr3	185644326	185644390	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.11916	6.52662	K562	AQR
chr3	185635226	185635285	-	3'-UTR,intron-Distal	6.54654	21.14040	HepG2	SUB1
chr3	185635388	185635454	-	3'-UTR,intron-Distal,intron-Proximal	3.07701	6.62408	K562	PABPC4
chr3	185636212	185636229	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.10158	5.10726	K562	UCHL5
chr3	185637224	185637279	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.98235	3.02060	K562	LIN28B
chr3	185639858	185639919	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.46277	10.21526	HepG2	BCLAF1
chr3	185641491	185641612	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.12547	13.10562	K562	EFTUD2
chr3	185641567	185641609	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.19385	3.04831	K562	RBM15
chr3	185635455	185635538	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.34060	11.07586	K562	BUD13
chr3	185637272	185637327	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.71857	10.13718	HepG2	AQR
chr3	185636152	185636209	-	3'-UTR,CDS,intron-Distal,intron-Proximal	4.66525	3.63055	K562	ZNF800
chr3	185636203	185636275	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.98599	4.90219	HepG2	AQR
chr3	185634812	185634900	-	3'-UTR,intron-Distal,intron-Proximal	3.81977	11.30933	K562	UPF1
chr3	185639798	185639857	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.34411	7.77368	K562	DDX24
chr3	185637224	185637289	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.25858	9.97241	K562	DDX24
chr3	185635469	185635515	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.43401	4.11795	K562	YBX3
chr3	185649312	185649366	-	5'-UTR,intron-Distal,intron-Proximal	3.18243	10.87225	K562	AGGF1
chr3	185649343	185649484	-	5'-UTR,intron-Distal,intron-Proximal	3.93156	6.46431	HepG2	TRA2A
chr3	185649410	185649500	-	5'-UTR,intron-Distal,intron-Proximal	3.64660	13.90271	HepG2	BCLAF1
chr3	185655711	185655776	-	5'-UTR,intron-Distal,intron-Proximal	4.84143	22.93371	HepG2	DDX3X
chr3	185655721	185655776	-	5'-UTR,intron-Distal,intron-Proximal	3.04343	3.22454	K562	NCBP2
chr3	185655691	185655786	-	5'-UTR,intron-Distal,intron-Proximal	3.02279	3.90998	HepG2	UCHL5
chr3	185655634	185655712	-	5'-UTR,CDS,intron-Distal	3.47968	58.07489	K562	DDX3X
chr3	185655718	185655775	-	5'-UTR,intron-Distal	4.29946	8.24732	K562	GEMIN5
chr3	185655766	185655773	-	5'-UTR,intron-Distal	5.55185	15.58450	K562	RBM15
chr3	185655651	185655707	-	5'-UTR,intron-Distal	3.00037	16.56306	K562	ZNF622
chr3	185655564	185655615	-	5'-UTR,CDS,intron-Distal	4.05293	13.98297	K562	AQR
chr3	185655653	185655717	-	5'-UTR,intron-Distal	3.18749	13.92075	HepG2	GRWD1
chr3	185649313	185649382	-	5'-UTR,intron-Distal,intron-Proximal	3.54941	14.45709	K562	AQR
chr3	185649310	185649410	-	5'-UTR,intron-Distal,intron-Proximal	4.28047	14.92872	HepG2	BCLAF1
chr3	185655559	185655629	-	5'-UTR,CDS,intron-Distal	3.00966	16.09837	HepG2	PRPF8
chr3	185649401	185649485	-	5'-UTR,intron-Distal,intron-Proximal	5.65985	9.75867	K562	TRA2A
chr3	185655712	185655780	-	5'-UTR,intron-Distal,intron-Proximal	4.45801	82.33954	K562	DDX3X
chr3	185655709	185655800	-	5'-UTR,intron-Distal,intron-Proximal	4.34995	42.92078	HepG2	NCBP2
chr3	185649489	185649532	-	5'-UTR,intron-Distal,intron-Proximal	3.75556	5.37538	K562	ZNF622
chr3	185655713	185655766	-	5'-UTR,intron-Distal	4.86583	22.98569	K562	RBM15
chr3	185649577	185649633	-	CDS,intron-Distal	3.32965	6.91872	HepG2	BCLAF1
chr3	185649586	185649646	-	CDS,intron-Distal,intron-Proximal	3.36687	3.79741	HepG2	GRWD1
chr3	185649588	185649644	-	CDS,intron-Distal,intron-Proximal	3.10550	4.85577	K562	ZNF622
chr3	185639690	185639734	-	intron-Distal,intron-Proximal	3.83115	3.04871	K562	AQR
chr3	185652201	185652268	-	intron-Distal,intron-Proximal	3.26255	3.10677	K562	SRSF1
chr3	185655061	185655115	-	intron-Distal	3.58302	7.26439	K562	EXOSC5
chr3	185655087	185655120	-	intron-Distal	3.85985	9.88918	HepG2	HNRNPM
chr3	185645700	185645754	-	intron-Distal	3.16961	6.48244	HepG2	HNRNPM
chr3	185636228	185636261	-	intron-Distal,intron-Proximal	3.08769	4.81603	K562	BUD13
chr3	185655300	185655336	-	intron-Distal,intron-Proximal	5.30594	9.40914	HepG2	HNRNPM
chr3	185639753	185639798	-	intron-Distal,intron-Proximal	3.99810	4.49024	K562	AQR
chr3	185654910	185654940	-	intron-Distal	4.33471	4.53244	K562	HNRNPM
chr3	185644523	185644554	-	intron-Distal,intron-Proximal	4.19454	9.04524	K562	AQR
chr3	185655506	185655560	-	intron-Distal	4.82073	76.88386	K562	EFTUD2
chr3	185645155	185645197	-	intron-Distal	4.29754	9.93312	HepG2	HNRNPM
chr3	185641481	185641563	-	intron-Distal,intron-Proximal	4.48743	4.95583	K562	RBM22
chr3	185638828	185638859	-	intron-Distal,intron-Proximal	4.96454	24.02737	K562	AQR
chr3	185647380	185647423	-	intron-Distal	5.88226	10.99895	HepG2	HNRNPM
chr3	185647315	185647389	-	intron-Distal	3.45713	8.80041	K562	HNRNPM
chr3	185637185	185637210	-	intron-Distal,intron-Proximal	5.16883	48.84716	HepG2	PRPF8
chr3	185645248	185645286	-	intron-Distal	3.22251	4.46778	K562	EXOSC5
chr3	185646682	185646729	-	intron-Distal	5.16832	5.68226	HepG2	HNRNPM
chr3	185647205	185647257	-	intron-Distal	3.46387	11.10344	K562	HNRNPM
chr3	185655540	185655610	-	intron-Distal	5.43243	47.22228	HepG2	EFTUD2
chr3	185645717	185645775	-	intron-Distal	3.18354	6.11545	HepG2	MATR3
chr3	185645197	185645267	-	intron-Distal	3.23130	8.41828	HepG2	HNRNPM
chr3	185655376	185655452	-	intron-Distal	4.23553	28.86509	HepG2	EFTUD2
chr3	185655506	185655562	-	intron-Distal	3.77891	25.17218	K562	PRPF8
chr3	185655177	185655215	-	intron-Distal,intron-Proximal	3.80966	8.25342	HepG2	HNRNPM
chr3	185652414	185652494	-	intron-Distal	3.68635	4.19039	HepG2	PTBP1
chr3	185643158	185643227	-	intron-Distal,intron-Proximal	4.90832	6.32040	K562	RBM22
chr3	185655560	185655592	-	intron-Distal	4.98334	27.49328	K562	EFTUD2
chr3	185636068	185636124	-	intron-Distal,intron-Proximal	4.12993	6.62503	K562	KHSRP
chr3	185655377	185655506	-	intron-Distal	3.99917	43.08626	K562	EFTUD2
chr3	185655506	185655588	-	intron-Distal	3.71153	4.35285	K562	RBM22
chr3	185655496	185655560	-	intron-Distal	3.19217	3.85440	HepG2	HNRNPC
chr3	185655281	185655344	-	intron-Distal,intron-Proximal	4.50937	15.53043	K562	HNRNPM
chr3	185637067	185637202	-	intron-Distal,intron-Proximal	3.67374	8.67954	K562	KHSRP
chr3	185654949	185654995	-	intron-Distal	3.41232	6.74302	HepG2	HNRNPM
chr3	185635924	185635977	-	intron-Distal	3.27190	4.76426	K562	PRPF8
chr3	185646147	185646194	-	intron-Distal	3.56383	8.85827	K562	EXOSC5
chr3	185637306	185637318	-	intron-Distal,intron-Proximal	4.18444	5.83621	K562	AQR
chr3	185655467	185655502	-	intron-Distal	3.50606	11.64132	K562	PRPF8
chr3	185647160	185647208	-	intron-Distal	3.98011	9.64755	HepG2	HNRNPM
chr3	185652315	185652373	-	intron-Distal,intron-Proximal	3.24148	4.73383	HepG2	HNRNPM
chr3	185636048	185636122	-	intron-Distal,intron-Proximal	3.93660	12.13872	K562	PRPF8
chr3	185655469	185655501	-	intron-Distal	3.98252	22.44064	HepG2	EFTUD2
chr3	185637175	185637204	-	intron-Distal,intron-Proximal	3.13727	10.77971	K562	PRPF8
chr3	185655501	185655540	-	intron-Distal	4.77496	54.34291	HepG2	EFTUD2
chr3	185647046	185647084	-	intron-Distal	4.73012	6.45442	HepG2	HNRNPM
chr3	185655333	185655420	-	intron-Distal	3.59172	16.76726	K562	PRPF8
chr3	185644532	185644578	-	intron-Distal,intron-Proximal	3.92126	8.55183	K562	SF3B4
chr3	185638735	185638786	-	intron-Distal	3.16614	4.48980	K562	PRPF8
chr3	185654108	185654134	-	intron-Distal	4.30112	4.38558	HepG2	HNRNPM
chr3	185655066	185655112	-	intron-Distal	3.14548	7.86107	HepG2	EFTUD2
chr3	185655505	185655551	-	intron-Distal	4.14671	13.67177	HepG2	HNRNPM
chr3	185645426	185645481	-	intron-Distal	3.60150	9.46590	HepG2	SUGP2
chr3	185645843	185645897	-	intron-Distal	4.49404	10.58275	HepG2	SUGP2
chr3	185653848	185653919	-	intron-Distal	3.11298	4.49883	K562	TARDBP
chr3	185638796	185638883	-	intron-Distal,intron-Proximal	4.42341	7.87148	HepG2	PRPF8
chr3	185652077	185652147	-	intron-Distal,intron-Proximal	5.09484	9.56097	K562	TIA1
chr3	185645319	185645375	-	intron-Distal	4.64095	23.23044	HepG2	HNRNPM
chr3	185638859	185638892	-	intron-Distal,intron-Proximal	3.95486	20.89344	K562	AQR
chr3	185655174	185655280	-	intron-Distal,intron-Proximal	5.44022	7.30663	HepG2	EXOSC5
chr3	185636080	185636149	-	intron-Distal,intron-Proximal	3.89321	7.58883	K562	AQR
chr3	185655373	185655431	-	intron-Distal	3.67699	10.15855	HepG2	HNRNPM
chr3	185655420	185655467	-	intron-Distal	3.08299	11.19920	K562	PRPF8
chr3	185645543	185645590	-	intron-Distal	3.93194	3.33944	K562	MATR3
chr3	185647426	185647468	-	intron-Distal	5.45040	6.45442	HepG2	HNRNPM
chr3	185655215	185655280	-	intron-Distal,intron-Proximal	4.64849	21.78471	HepG2	HNRNPM
chr3	185638673	185638786	-	intron-Distal	3.16298	5.34873	K562	KHSRP
chr3	185647199	185647274	-	intron-Distal	3.18885	12.71813	K562	EXOSC5
chr3	185655035	185655110	-	intron-Distal	3.01595	11.70757	K562	PRPF8
chr3	185653293	185653389	-	intron-Distal	3.90981	9.27038	HepG2	QKI
chr3	185645711	185645774	-	intron-Distal	3.61608	5.06208	K562	MATR3
chr3	185647319	185647380	-	intron-Distal	4.96209	19.52065	HepG2	HNRNPM
chr3	185645159	185645183	-	intron-Distal	3.51045	3.59509	K562	HNRNPM
chr3	185645070	185645188	-	intron-Distal	3.27393	5.66244	HepG2	EXOSC5
chr3	185647208	185647260	-	intron-Distal	4.83231	23.23044	HepG2	HNRNPM
chr3	185645088	185645153	-	intron-Distal	3.66912	9.80123	HepG2	HNRNPM
chr3	185646505	185646556	-	intron-Distal	3.72878	9.08489	HepG2	SUGP2
chr3	185645320	185645373	-	intron-Distal	3.90932	9.31816	K562	HNRNPM
chr3	185645781	185645800	-	intron-Distal	3.68505	5.32485	HepG2	SUGP2
chr3	185645506	185645539	-	intron-Distal	4.66703	5.72853	HepG2	HNRNPM
chr3	185655194	185655281	-	intron-Distal,intron-Proximal	3.37307	14.76080	K562	HNRNPM
chr3	185644583	185644656	-	intron-Distal,intron-Proximal	4.10874	3.44480	HepG2	TIA1
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

eCLIP assay for TRA2B is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for TRA2B is not available on ENCORE database.
98 RBPs can affect the levels of TRA2B.

The Knockdown/knockout RNA-Seq assay for TRA2B is not available on ENCORE database.

98 RBPs can affect the gene expression of TRA2B :

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
TRA2B	ENSG00000136527.13	3615.28390	2646.11220	0.45010	3.65190	3.05210	HepG2	AKAP1
TRA2B	ENSG00000136527.13	3759.20150	4447.06340	-0.24240	3.51300	2.75580	HepG2	AUH
TRA2B	ENSG00000136527.13	2039.78850	2895.39770	-0.50530	4.26180	3.16800	HepG2	BCLAF1
TRA2B	ENSG00000136527.13	2285.07870	4101.66970	-0.84400	16.84090	15.54630	HepG2	BOP1
TRA2B	ENSG00000136527.13	3039.63500	3623.69160	-0.25360	2.65460	1.89850	HepG2	CALR
TRA2B	ENSG00000136527.13	2362.22200	2894.81490	-0.29330	5.59580	4.70990	HepG2	CKAP4
TRA2B	ENSG00000136527.13	1691.96180	3765.57520	-1.15420	26.94520	25.08210	HepG2	CPSF6
TRA2B	ENSG00000136527.13	3140.94380	4707.39980	-0.58370	23.60530	21.84000	HepG2	DAZAP1
TRA2B	ENSG00000136527.13	1953.24300	2623.61660	-0.42570	4.56860	3.72170	HepG2	DDX21
TRA2B	ENSG00000136527.13	2169.44300	3275.90480	-0.59460	5.42750	4.38940	HepG2	DDX55
TRA2B	ENSG00000136527.13	1655.65310	2177.18340	-0.39510	2.51440	1.92420	HepG2	DDX6
TRA2B	ENSG00000136527.13	1928.71670	2509.91930	-0.38000	5.76580	4.78320	HepG2	DNAJC21
TRA2B	ENSG00000136527.13	2007.88980	2487.81700	-0.30920	5.83790	4.94310	HepG2	DNAJC2
TRA2B	ENSG00000136527.13	3288.82960	2252.25330	0.54610	4.12000	3.28890	HepG2	EIF4B
TRA2B	ENSG00000136527.13	2940.59310	4448.79390	-0.59730	8.51080	7.11310	HepG2	EIF4G2
TRA2B	ENSG00000136527.13	2306.23680	3771.99020	-0.70980	3.12360	2.04280	HepG2	FTO
TRA2B	ENSG00000136527.13	2013.08270	1631.04850	0.30350	2.61720	1.85220	HepG2	FUBP3
TRA2B	ENSG00000136527.13	3324.89440	2333.76050	0.51060	5.38920	4.44460	HepG2	FXR1
TRA2B	ENSG00000136527.13	3321.59690	2298.25330	0.53120	5.99340	4.67070	HepG2	G3BP2
TRA2B	ENSG00000136527.13	2491.44060	4268.62470	-0.77680	10.64800	9.44760	HepG2	GPKOW
TRA2B	ENSG00000136527.13	1902.72630	2533.96570	-0.41330	4.58380	3.78010	HepG2	HNRNPA1
TRA2B	ENSG00000136527.13	3361.44780	4326.23970	-0.36400	7.03490	5.66270	HepG2	HNRNPA2B1
TRA2B	ENSG00000136527.13	2061.96940	2818.58860	-0.45090	5.27200	4.33870	HepG2	HNRNPC
TRA2B	ENSG00000136527.13	3024.31520	4231.90270	-0.48470	12.08570	10.73160	HepG2	HNRNPF
TRA2B	ENSG00000136527.13	2840.48260	2191.77930	0.37390	3.51860	2.73580	HepG2	HNRNPK
TRA2B	ENSG00000136527.13	3451.75130	4288.07810	-0.31300	7.65100	6.58000	HepG2	HNRNPL
TRA2B	ENSG00000136527.13	2731.30890	4073.62250	-0.57670	7.25770	6.29390	HepG2	HNRNPLL
TRA2B	ENSG00000136527.13	3413.63580	2715.43020	0.33000	3.82570	2.72640	HepG2	HNRNPM
TRA2B	ENSG00000136527.13	2318.51820	2799.95230	-0.27220	4.06160	3.33810	HepG2	HNRNPU
TRA2B	ENSG00000136527.13	2906.81480	4167.21480	-0.51960	9.05470	7.81400	HepG2	IGF2BP1
TRA2B	ENSG00000136527.13	2224.70330	2860.05510	-0.36240	8.58220	7.36000	HepG2	ILF2
TRA2B	ENSG00000136527.13	2252.84660	2646.80210	-0.23250	3.68330	2.50760	HepG2	KIF1C
TRA2B	ENSG00000136527.13	3730.34270	4813.65230	-0.36780	2.39690	1.62780	HepG2	LARP4
TRA2B	ENSG00000136527.13	3555.71180	2334.57280	0.60690	7.08150	6.04800	HepG2	MAGOH
TRA2B	ENSG00000136527.13	3991.60350	4667.84840	-0.22580	2.42350	1.71190	HepG2	NOL12
TRA2B	ENSG00000136527.13	2484.28120	3612.00780	-0.54000	7.01660	5.86140	HepG2	NSUN2
TRA2B	ENSG00000136527.13	2765.45060	2143.94950	0.36710	6.63510	5.75710	HepG2	PCBP1
TRA2B	ENSG00000136527.13	1916.16750	2497.33020	-0.38220	5.66960	4.64750	HepG2	PPIL4
TRA2B	ENSG00000136527.13	1569.72150	2527.63450	-0.68730	8.03000	6.73770	HepG2	PRPF8
TRA2B	ENSG00000136527.13	2724.62070	2181.58950	0.32060	5.19040	4.48990	HepG2	PTBP1
TRA2B	ENSG00000136527.13	3017.22200	4455.87220	-0.56250	9.10710	8.10980	HepG2	PUF60
TRA2B	ENSG00000136527.13	4100.11770	4730.10780	-0.20620	3.98660	3.30270	HepG2	PUM1
TRA2B	ENSG00000136527.13	2623.18010	2949.20680	-0.16900	1.97890	1.43870	HepG2	PUS1
TRA2B	ENSG00000136527.13	3124.49130	4145.01100	-0.40780	6.02010	4.81490	HepG2	RBM15
TRA2B	ENSG00000136527.13	2622.28060	2144.27010	0.29020	2.75960	2.08580	HepG2	RBM25
TRA2B	ENSG00000136527.13	3469.40180	2427.86590	0.51490	12.55030	11.55350	HepG2	NELFE
TRA2B	ENSG00000136527.13	3179.68700	2261.28850	0.49160	11.69010	10.55580	HepG2	RECQL
TRA2B	ENSG00000136527.13	2274.56500	4558.81430	-1.00310	24.11470	22.51990	HepG2	RPLP0
TRA2B	ENSG00000136527.13	2049.22970	2917.27870	-0.50950	3.15900	2.15370	HepG2	RPS10
TRA2B	ENSG00000136527.13	1553.87560	2059.07240	-0.40610	4.56140	3.79260	HepG2	RPS19
TRA2B	ENSG00000136527.13	2388.27920	2880.98240	-0.27060	2.07120	1.37290	HepG2	RPS2
TRA2B	ENSG00000136527.13	1839.87850	2500.40660	-0.44260	3.19790	2.36100	HepG2	RRP9
TRA2B	ENSG00000136527.13	1727.25630	2493.46940	-0.52970	13.93260	12.65160	HepG2	SAFB2
TRA2B	ENSG00000136527.13	6450.46930	3980.17170	0.69650	6.52330	5.46250	HepG2	SF3A3
TRA2B	ENSG00000136527.13	2618.75880	4032.11140	-0.62270	9.43080	8.20410	HepG2	SF3B1
TRA2B	ENSG00000136527.13	2683.42350	2271.24330	0.24050	3.14390	2.51870	HepG2	SF3B4
TRA2B	ENSG00000136527.13	3074.29960	4272.49230	-0.47480	15.43850	14.02690	HepG2	SLBP
TRA2B	ENSG00000136527.13	3103.11400	4486.42030	-0.53180	3.48080	2.59920	HepG2	SNRNP70
TRA2B	ENSG00000136527.13	3798.89510	4820.03400	-0.34350	7.75680	7.03490	HepG2	SRFBP1
TRA2B	ENSG00000136527.13	3959.15160	2370.71610	0.73980	28.27620	27.11360	HepG2	SRSF1
TRA2B	ENSG00000136527.13	3604.05200	4399.52800	-0.28770	4.94450	4.14590	HepG2	SRSF5
TRA2B	ENSG00000136527.13	2744.85630	4157.70880	-0.59910	18.11900	16.61810	HepG2	SRSF7
TRA2B	ENSG00000136527.13	1905.52220	2657.70180	-0.48000	5.91680	4.56900	HepG2	SUPT6H
TRA2B	ENSG00000136527.13	2049.14550	3261.26890	-0.67040	7.02330	6.02420	HepG2	SUPV3L1
TRA2B	ENSG00000136527.13	2546.57550	2130.97470	0.25690	2.87050	2.29990	HepG2	TAF15
TRA2B	ENSG00000136527.13	2343.82850	3970.38330	-0.76040	13.26010	11.85950	HepG2	TARDBP
TRA2B	ENSG00000136527.13	1534.90090	2186.00940	-0.51020	4.32080	3.11110	HepG2	TFIP11
TRA2B	ENSG00000136527.13	2308.40920	1957.98770	0.23740	2.03950	1.31890	HepG2	TIA1
TRA2B	ENSG00000136527.13	1908.27350	2720.60060	-0.51170	8.24780	7.46810	HepG2	TIAL1
TRA2B	ENSG00000136527.13	2111.47120	2745.00260	-0.37860	7.16990	6.33530	HepG2	TRIM56
TRA2B	ENSG00000136527.13	3323.18740	4607.79960	-0.47150	4.51220	3.42500	HepG2	UBE2L3
TRA2B	ENSG00000136527.13	2835.04840	3529.79800	-0.31620	5.89380	4.93620	HepG2	UPF1
TRA2B	ENSG00000136527.13	4226.66370	3407.89020	0.31050	5.88390	5.06540	HepG2	UTP3
TRA2B	ENSG00000136527.13	3173.92660	2801.03420	0.18020	2.49580	1.85250	HepG2	ZC3H8
TRA2B	ENSG00000136527.13	5186.13210	4137.22840	0.32590	3.49980	2.15690	K562	AARS
TRA2B	ENSG00000136527.13	7935.73730	9663.15680	-0.28410	2.57250	1.40100	K562	ABCF1
TRA2B	ENSG00000136527.13	7080.48130	4983.43970	0.50660	9.77720	8.79340	K562	AGGF1
TRA2B	ENSG00000136527.13	7431.66630	5185.48230	0.51910	7.74910	6.60600	K562	AKAP8L
TRA2B	ENSG00000136527.13	12077.14070	8404.24380	0.52300	7.74410	6.84410	K562	AQR
TRA2B	ENSG00000136527.13	3877.93920	4794.23990	-0.30600	5.71860	4.32260	K562	BCLAF1
TRA2B	ENSG00000136527.13	3543.21030	5463.61430	-0.62480	8.96710	7.34240	K562	BOP1
TRA2B	ENSG00000136527.13	6020.63370	8290.30730	-0.46150	2.48730	1.48960	K562	CNOT7
TRA2B	ENSG00000136527.13	3400.45940	5809.40150	-0.77270	19.11930	17.04440	K562	CPSF6
TRA2B	ENSG00000136527.13	2853.01670	3637.14450	-0.35030	5.28200	3.75850	K562	CSTF2
TRA2B	ENSG00000136527.13	4799.83830	5514.24550	-0.20020	2.57810	1.41130	K562	DDX21
TRA2B	ENSG00000136527.13	3807.99920	4399.69040	-0.20840	2.62980	1.45810	K562	EIF2S1
TRA2B	ENSG00000136527.13	5413.38180	4332.14230	0.32130	2.37310	1.42280	K562	EIF3D
TRA2B	ENSG00000136527.13	4713.28980	4031.33620	0.22540	2.45910	1.70770	K562	EIF3G
TRA2B	ENSG00000136527.13	10958.99550	9855.31370	0.15300	2.17650	1.33850	K562	EIF4G2
TRA2B	ENSG00000136527.13	4671.27130	5910.90520	-0.33960	3.28490	2.34840	K562	FMR1
TRA2B	ENSG00000136527.13	3643.90390	5010.01530	-0.45930	4.78460	3.55050	K562	FTO
TRA2B	ENSG00000136527.13	5588.28710	4351.90220	0.36070	6.85110	5.95960	K562	FXR1
TRA2B	ENSG00000136527.13	6006.12510	4633.46620	0.37420	2.39070	1.74000	K562	G3BP2
TRA2B	ENSG00000136527.13	3679.86410	5546.55830	-0.59190	9.83010	8.32350	K562	GPKOW
TRA2B	ENSG00000136527.13	3390.60900	4527.71830	-0.41720	5.55170	4.73500	K562	HNRNPC
TRA2B	ENSG00000136527.13	7635.70300	5712.98090	0.41840	3.74250	2.64790	K562	HNRNPM
TRA2B	ENSG00000136527.13	4226.97870	5789.52970	-0.45380	8.96230	7.36480	K562	HNRNPU
TRA2B	ENSG00000136527.13	7467.38000	5503.13700	0.44020	2.88210	2.03790	K562	KIF1C
TRA2B	ENSG00000136527.13	3404.54220	4736.04410	-0.47620	3.63840	2.55120	K562	KRR1
TRA2B	ENSG00000136527.13	7410.96880	6164.89730	0.26550	2.75700	1.85020	K562	MBNL1
TRA2B	ENSG00000136527.13	4096.86580	5414.05580	-0.40220	5.05820	3.85470	K562	METAP2
TRA2B	ENSG00000136527.13	7008.09060	4321.14260	0.69750	4.91430	3.62780	K562	NAA15
TRA2B	ENSG00000136527.13	5014.28450	6932.51090	-0.46730	7.49910	6.35480	K562	NSUN2
TRA2B	ENSG00000136527.13	3709.08170	5663.52100	-0.61060	7.58870	6.21160	K562	PCBP3
TRA2B	ENSG00000136527.13	3245.41710	4344.08680	-0.42060	6.26910	5.06770	K562	POLR2G
TRA2B	ENSG00000136527.13	5338.09010	3936.49620	0.43930	5.27100	4.23450	K562	PRPF8
TRA2B	ENSG00000136527.13	5689.24840	4599.29060	0.30670	3.51710	2.77940	K562	PTBP1
TRA2B	ENSG00000136527.13	11903.89710	5142.66630	1.21070	34.50170	32.53910	K562	PUS1
TRA2B	ENSG00000136527.13	8226.57040	5010.67840	0.71520	21.91830	20.18010	K562	RBM15
TRA2B	ENSG00000136527.13	2790.33640	3703.30170	-0.40840	5.62890	4.20700	K562	RCC2
TRA2B	ENSG00000136527.13	4103.62200	5274.93920	-0.36230	2.90790	1.90900	K562	SF3B1
TRA2B	ENSG00000136527.13	2914.97700	4233.93310	-0.53850	2.59400	1.58110	K562	SRSF4
TRA2B	ENSG00000136527.13	4159.26890	4921.05660	-0.24260	3.39400	2.08970	K562	SRSF7
TRA2B	ENSG00000136527.13	2752.07110	3812.51770	-0.47020	2.64130	1.64930	K562	SUPV3L1
TRA2B	ENSG00000136527.13	6478.82740	4357.26940	0.57220	11.91400	10.21030	K562	SYNCRIP
TRA2B	ENSG00000136527.13	2661.44550	3904.59590	-0.55300	6.20690	4.74960	K562	TIAL1
TRA2B	ENSG00000136527.13	6089.71080	4490.61940	0.43940	3.86440	2.52880	K562	U2AF1
TRA2B	ENSG00000136527.13	5712.22820	4638.06640	0.30040	3.65350	2.72810	K562	U2AF2
TRA2B	ENSG00000136527.13	2991.71630	4034.51090	-0.43140	2.49190	1.53030	K562	UCHL5
TRA2B	ENSG00000136527.13	5807.98210	7350.64870	-0.33980	3.47540	2.67570	K562	UPF1
TRA2B	ENSG00000136527.13	5172.20360	6289.78250	-0.28220	3.10310	2.17800	K562	WDR3
TRA2B	ENSG00000136527.13	7522.76590	9468.51010	-0.33190	3.09070	2.17490	K562	ZC3H8
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for TRA2B is not available on ENCORE database.

22 RBPs can affect the splicing of TRA2B :

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	2ndExonStart	2ndExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
SE	TRA2B	ENSG00000136527.13	chr3	-	185649364	185649640			185644514	185644522	185655612	185655817	-0.15200	0.00000	0.00010	excluded	K562	AKAP8L
SE	TRA2B	ENSG00000136527.13	chr3	-	185649364	185649640			185644514	185644522	185655612	185655817	0.20700	0.00006	0.01229	included	K562	FMR1
SE	TRA2B	ENSG00000136527.13	chr3	-	185649364	185649640			185644514	185644522	185655612	185655817	-0.08400	0.00340	0.07142	excluded	HepG2	HNRNPK
SE	TRA2B	ENSG00000136527.13	chr3	-	185649364	185649640			185644514	185644522	185655612	185655817	-0.11000	0.00181	0.02332	excluded	HepG2	U2AF2
SE	TRA2B	ENSG00000136527.13	chr3	-	185649364	185649640			185644514	185644522	185655612	185655817	-0.11600	0.00000	0.00031	excluded	HepG2	AKAP1
SE	TRA2B	ENSG00000136527.13	chr3	-	185649364	185649640			185644514	185644522	185655612	185655817	0.26900	0.00000	0.00000	included	K562	AQR
SE	TRA2B	ENSG00000136527.13	chr3	-	185644451	185644522			185642872	185643414	185655612	185655775	-0.12900	0.00001	0.00022	excluded	K562	AQR
SE	TRA2B	ENSG00000136527.13	chr3	-	185637148	185637284			185636152	185636226	185638891	185638969	-0.08200	0.00000	0.00000	excluded	K562	AQR
SE	TRA2B	ENSG00000136527.13	chr3	-	185649364	185649640			185644514	185644522	185655612	185655817	0.11200	0.00106	0.07481	included	K562	SUPV3L1
SE	TRA2B	ENSG00000136527.13	chr3	-	185649364	185649640			185644514	185644522	185655612	185655817	-0.08800	0.00623	0.07349	excluded	K562	PUS1
SE	TRA2B	ENSG00000136527.13	chr3	-	185649364	185649640			185644514	185644522	185655612	185655817	0.11100	0.00006	0.01893	included	K562	MTPAP
SE	TRA2B	ENSG00000136527.13	chr3	-	185649364	185649640			185643251	185643414	185655612	185655817	0.39400	0.00027	0.02349	included	HepG2	FTO
SE	TRA2B	ENSG00000136527.13	chr3	-	185649364	185649640			185644514	185644522	185655612	185655817	-0.05700	0.00520	0.09083	excluded	HepG2	SRSF1
SE	TRA2B	ENSG00000136527.13	chr3	-	185649364	185649640			185644514	185644522	185655612	185655817	0.18100	0.00000	0.00003	included	HepG2	SF3A3
SE	TRA2B	ENSG00000136527.13	chr3	-	185649394	185649640			185644388	185644522	185655612	185655801	0.05800	0.00005	0.04043	included	K562	PUM2
SE	TRA2B	ENSG00000136527.13	chr3	-	185649364	185649640			185644514	185644522	185655612	185655817	0.12800	0.00000	0.00149	included	K562	UPF1
SE	TRA2B	ENSG00000136527.13	chr3	-	185649364	185649640			185644514	185644522	185655612	185655817	0.06800	0.00028	0.01399	included	K562	HNRNPU
SE	TRA2B	ENSG00000136527.13	chr3	-	185649364	185649640			185644514	185644522	185655612	185655817	-0.17600	0.00000	0.00000	excluded	K562	AGGF1
SE	TRA2B	ENSG00000136527.13	chr3	-	185649364	185649640			185644514	185644522	185655612	185655817	0.08000	0.00014	0.02774	included	K562	ZC3H8
SE	TRA2B	ENSG00000136527.13	chr3	-	185649364	185649640			185644514	185644522	185655612	185655817	0.11100	0.00001	0.00970	included	K562	NCBP2
SE	TRA2B	ENSG00000136527.13	chr3	-	185649364	185649640			185644514	185644522	185655612	185655817	0.39800	0.00000	0.00000	included	K562	HNRNPC
A3SS	TRA2B	ENSG00000136527.13	chr3	-	185636152	185636366			185636152	185636226	185637224	185637453	0.07400	0.00000	0.00000	longer	K562	AQR
A3SS	TRA2B	ENSG00000136527.13	chr3	-	185643333	185643520			185643333	185643414	185644388	185644584	0.09000	0.00000	0.00000	longer	K562	AQR
A3SS	TRA2B	ENSG00000136527.13	chr3	-	185635502	185635536			185635502	185635513	185636152	185636249	0.06400	0.00000	0.00000	longer	K562	AQR
A3SS	TRA2B	ENSG00000136527.13	chr3	-	185644406	185644654			185644406	185644522	185655612	185655775	0.26400	0.00000	0.00000	longer	K562	AQR
A3SS	TRA2B	ENSG00000136527.13	chr3	-	185641583	185641796			185641583	185641772	185643251	185643414	0.12800	0.00000	0.00000	longer	K562	AQR
A3SS	TRA2B	ENSG00000136527.13	chr3	-	185639798	185640022			185639798	185639914	185641583	185643052	0.08400	0.00000	0.00000	longer	K562	AQR
A3SS	TRA2B	ENSG00000136527.13	chr3	-	185638891	185639064			185638891	185638975	185639798	185639914	0.05600	0.00000	0.00000	longer	K562	AQR
A3SS	TRA2B	ENSG00000136527.13	chr3	-	185644406	185644654			185644406	185644567	185649364	185649640	-0.24400	0.00108	0.00743	shorter	K562	AQR
A3SS	TRA2B	ENSG00000136527.13	chr3	-	185644388	185644587			185644388	185644522	185649364	185649640	-0.12700	0.00020	0.02971	shorter	K562	HNRNPC
MXE	TRA2B	ENSG00000136527.13	chr3	-	185638891	185638975	185639798	185639946	185637224	185637284	185641583	185643052	0.06100	0.00000	0.00000	1included	K562	AQR
MXE	TRA2B	ENSG00000136527.13	chr3	-	185638891	185638975	185639798	185639991	185637224	185637284	185641583	185643052	0.05700	0.00000	0.00000	1included	K562	AQR
MXE	TRA2B	ENSG00000136527.13	chr3	-	185637224	185637366	185638891	185639011	185636152	185636226	185639798	185639914	0.05200	0.00000	0.00000	1included	K562	AQR
MXE	TRA2B	ENSG00000136527.13	chr3	-	185637224	185637366	185638891	185639084	185636152	185636226	185639798	185639914	0.05200	0.00000	0.00000	1included	K562	AQR
MXE	TRA2B	ENSG00000136527.13	chr3	-	185637224	185637366	185638891	185639064	185636152	185636226	185639798	185639914	0.05900	0.00000	0.00000	1included	K562	AQR
MXE	TRA2B	ENSG00000136527.13	chr3	-	185637224	185637366	185638891	185639015	185636152	185636226	185639798	185639914	0.06300	0.00000	0.00000	1included	K562	AQR
MXE	TRA2B	ENSG00000136527.13	chr3	-	185637224	185637284	185638891	185639015	185636152	185636226	185639798	185639914	0.05100	0.00000	0.00000	1included	K562	AQR
MXE	TRA2B	ENSG00000136527.13	chr3	-	185637224	185637366	185638891	185638975	185636152	185636226	185639798	185639914	-0.06500	0.01492	0.08723	2included	K562	AQR
MXE	TRA2B	ENSG00000136527.13	chr3	-	185637224	185637284	185638891	185638975	185636152	185636226	185639798	185639914	0.12400	0.00000	0.00014	1included	HepG2	DDX55
MXE	TRA2B	ENSG00000136527.13	chr3	-	185637224	185637284	185638891	185638975	185636152	185636226	185639798	185639914	0.06400	0.00064	0.09206	1included	K562	PUM2
MXE	TRA2B	ENSG00000136527.13	chr3	-	185637224	185637284	185638891	185638975	185636152	185636226	185639798	185639914	0.05600	0.00012	0.00770	1included	K562	DDX55
MXE	TRA2B	ENSG00000136527.13	chr3	-	185637224	185637284	185638891	185638975	185636152	185636226	185639798	185639914	0.06900	0.00473	0.08770	1included	HepG2	TIAL1
MXE	TRA2B	ENSG00000136527.13	chr3	-	185641583	185641772	185649364	185649640	185639798	185639914	185655612	185655817	0.05300	0.00040	0.01248	1included	K562	SUPV3L1
MXE	TRA2B	ENSG00000136527.13	chr3	-	185639798	185639914	185641583	185641772	185638891	185638975	185643251	185643414	-0.06100	0.00607	0.07078	2included	K562	HNRNPUL1

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

TRA2B

General Information

Functions

Localization

Domains (AlphaFold: TRA2B)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for TRA2B is not avaliable on ENCORE database.

42 proteins are bound to TRA2B RNA:

eCLIP assay for TRA2B is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for TRA2B is not available on ENCORE database.

98 RBPs can affect the gene expression of TRA2B :

The Knockdown/knockout RNA-Seq assay for TRA2B is not available on ENCORE database.

22 RBPs can affect the splicing of TRA2B :

The Knockdown/knockout RNA-Seq assay for TRA2B is not avaliable on ENCORE database.