TPRG1L

General Information

Gene Name       : TPRG1L
Gene ID             : ENSG00000158109.14
Essential Gene : No

Functions

Localization

Domains (AlphaFold: TPRG1L)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878TPRG1LENSG00000158109.147.728.227.97ENCSR000AEF
HepG2TPRG1LENSG00000158109.1429.7129.4629.59ENCSR985KAT
K562TPRG1LENSG00000158109.147.196.526.86ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for TPRG1L is not avaliable on ENCORE database.



Proteins bound to RNA
  • TPRG1L RNA is bound by 7 proteins.  







eCLIP assay for TPRG1L is not avaliable on ENCORE database.





7 proteins are bound to TPRG1L RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr135454773545596+3'-UTR3.815969.53397HepG2UPF1
chr135415833541651+5'-UTR,CDS3.747974.38588HepG2DDX3X
chr135423303542385+CDS,intron-Distal6.8600413.61817K562PUM2
chr135418853541998+CDS,intron-Proximal5.0756717.90517HepG2EFTUD2
chr135418793541999+CDS,intron-Proximal4.932069.23542K562EFTUD2
chr135422793542330+CDS,intron-Distal3.740313.55178K562PUM2
chr135418923541979+intron-Proximal4.173474.79286HepG2PRPF4
chr135418933541980+intron-Proximal4.2423211.17766HepG2PRPF8
chr135418973541967+intron-Proximal4.281984.57682HepG2SF3B4
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for TPRG1L is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for TPRG1L is not available on ENCORE database.

  • 125 RBPs can affect the levels of TPRG1L.  








The Knockdown/knockout RNA-Seq assay for TPRG1L is not available on ENCORE database.





125 RBPs can affect the gene expression of TPRG1L :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
TPRG1LENSG00000158109.10469.78240670.24710-0.512703.921102.66160HepG2AATF
TPRG1LENSG00000158109.10733.15460897.72410-0.292202.811302.19960HepG2ACO1
TPRG1LENSG00000158109.101142.705101720.38880-0.590305.045404.35370HepG2AKAP1
TPRG1LENSG00000158109.10644.52000881.20530-0.451302.829201.78120HepG2AKAP8
TPRG1LENSG00000158109.102211.243201423.444000.635407.212205.97370HepG2ASCC1
TPRG1LENSG00000158109.10420.89040817.71860-0.958209.364807.59190HepG2BCCIP
TPRG1LENSG00000158109.10474.87970710.52210-0.581304.134103.05430HepG2BCLAF1
TPRG1LENSG00000158109.101435.37890775.375600.8884014.1671012.96090HepG2BOP1
TPRG1LENSG00000158109.101056.28870748.793400.496305.585804.53880HepG2CALR
TPRG1LENSG00000158109.102622.645801352.380500.9554016.3700014.67640HepG2CIRBP
TPRG1LENSG00000158109.10451.73570897.44340-0.9903023.2570021.75080HepG2CKAP4
TPRG1LENSG00000158109.10414.31740626.37750-0.596302.933802.14510HepG2CNOT7
TPRG1LENSG00000158109.10452.64310677.23300-0.581306.095004.58190HepG2YBX3
TPRG1LENSG00000158109.101805.771701100.333600.7146016.3076015.00410HepG2CELF1
TPRG1LENSG00000158109.101447.209201183.116000.290603.929603.07040HepG2DAZAP1
TPRG1LENSG00000158109.101054.27980830.226800.344604.345903.32990HepG2DDX19B
TPRG1LENSG00000158109.101075.58580678.167700.6653010.057008.07810HepG2DDX1
TPRG1LENSG00000158109.101032.06970723.627300.512105.268104.00120HepG2DDX24
TPRG1LENSG00000158109.101126.22010752.255300.582103.792202.31500HepG2DDX27
TPRG1LENSG00000158109.102468.921701647.930800.583106.141205.24410HepG2DDX3X
TPRG1LENSG00000158109.101024.98920754.717400.441503.716102.22340HepG2DDX47
TPRG1LENSG00000158109.101092.01130803.993100.441602.726001.95740HepG2DDX55
TPRG1LENSG00000158109.101479.03550885.355000.740209.559107.81910HepG2DDX5
TPRG1LENSG00000158109.10912.111801415.77510-0.634305.496704.65160HepG2DDX6
TPRG1LENSG00000158109.101081.89360858.856600.333003.485202.73800HepG2DKC1
TPRG1LENSG00000158109.10420.05300664.97760-0.662707.775206.64520HepG2DNAJC21
TPRG1LENSG00000158109.101025.97880685.282900.582105.096403.88040HepG2EEF2
TPRG1LENSG00000158109.10914.682201360.85180-0.573205.304604.50050HepG2EIF2S1
TPRG1LENSG00000158109.10543.06850776.41950-0.515704.944103.40810HepG2EIF2S2
TPRG1LENSG00000158109.102571.789601503.820300.774008.986807.84060HepG2EIF4A3
TPRG1LENSG00000158109.10706.924301464.33450-1.0506011.157009.82030HepG2EIF4B
TPRG1LENSG00000158109.101381.455701167.227600.243002.396001.60890HepG2EIF4G1
TPRG1LENSG00000158109.101145.94480886.682700.369902.411001.39080HepG2ESF1
TPRG1LENSG00000158109.101695.810101344.328600.335004.164403.45290HepG2ETF1
TPRG1LENSG00000158109.10932.119801407.60880-0.594705.390604.47370HepG2G3BP1
TPRG1LENSG00000158109.10777.38160495.321800.650205.856404.54970HepG2GEMIN5
TPRG1LENSG00000158109.10945.66950659.389300.520104.037102.80550HepG2GNB2L1
TPRG1LENSG00000158109.10380.62560671.34850-0.818708.428407.39000HepG2HNRNPA1
TPRG1LENSG00000158109.10968.10030746.758100.374402.702902.01690HepG2HNRNPC
TPRG1LENSG00000158109.101125.29140956.790900.233902.134301.49800HepG2HNRNPF
TPRG1LENSG00000158109.101159.746301425.63200-0.297802.025801.42230HepG2HNRNPK
TPRG1LENSG00000158109.10612.028601077.72430-0.8163018.9183017.30550HepG2HNRNPL
TPRG1LENSG00000158109.101346.98610959.398600.489403.258001.91860HepG2HSPD1
TPRG1LENSG00000158109.102462.415001430.757800.7832010.915709.66840HepG2IGF2BP2
TPRG1LENSG00000158109.10734.556401439.18350-0.9703010.503708.47140HepG2KHSRP
TPRG1LENSG00000158109.101533.248401163.876500.397602.351001.58950HepG2LARP4
TPRG1LENSG00000158109.10516.080001526.52390-1.5646028.3812026.54280HepG2MATR3
TPRG1LENSG00000158109.101141.39900785.302400.539403.132002.09600HepG2MTPAP
TPRG1LENSG00000158109.102119.959701562.449700.440103.550102.83660HepG2NCBP2
TPRG1LENSG00000158109.10356.15080909.17580-1.3521015.7618012.78430HepG2NKRF
TPRG1LENSG00000158109.10297.35560738.30460-1.3120010.081707.95190HepG2NONO
TPRG1LENSG00000158109.10856.89030572.488200.581802.842001.93960HepG2PABPC1
TPRG1LENSG00000158109.10363.49540734.26650-1.0144018.2418016.42290HepG2PARN
TPRG1LENSG00000158109.101401.00430853.036000.715705.364703.95340HepG2PCBP2
TPRG1LENSG00000158109.101144.13300753.406900.6027010.136308.78960HepG2PRPF4
TPRG1LENSG00000158109.101176.625201531.32560-0.380105.487904.77220HepG2PTBP1
TPRG1LENSG00000158109.102093.327701119.902700.9023013.2170012.04390HepG2PUF60
TPRG1LENSG00000158109.10650.705401187.95940-0.8684015.1574013.66600HepG2PUM2
TPRG1LENSG00000158109.101430.41770914.377700.6455011.3020010.20130HepG2PUS1
TPRG1LENSG00000158109.101652.485301123.601300.556409.010008.19710HepG2RBM22
TPRG1LENSG00000158109.101202.34340632.507700.9266010.651808.62810HepG2RCC2
TPRG1LENSG00000158109.101201.800401704.27880-0.504007.671706.85120HepG2NELFE
TPRG1LENSG00000158109.101101.320901587.19450-0.527209.703408.65410HepG2RECQL
TPRG1LENSG00000158109.101551.134601030.643800.589707.089706.07020HepG2RPLP0
TPRG1LENSG00000158109.101338.87700808.760900.727105.298604.01660HepG2RPS10
TPRG1LENSG00000158109.10896.89560718.376300.320102.003001.31400HepG2RPS2
TPRG1LENSG00000158109.10873.68170628.913800.474102.651701.86820HepG2RPS3A
TPRG1LENSG00000158109.10413.77070613.48870-0.568203.520402.64750HepG2RRP9
TPRG1LENSG00000158109.10816.74400660.619800.306002.857902.20530HepG2SAFB2
TPRG1LENSG00000158109.10805.67720543.293700.568404.689903.47950HepG2SERBP1
TPRG1LENSG00000158109.102341.984701231.762600.9269010.361608.99200HepG2SF3A3
TPRG1LENSG00000158109.10550.86140762.32970-0.468702.850702.13460HepG2SF3B1
TPRG1LENSG00000158109.10454.811301594.43810-1.8097055.3534053.38500HepG2SF3B4
TPRG1LENSG00000158109.101271.371501073.820500.243502.669501.97770HepG2SLBP
TPRG1LENSG00000158109.101092.32510770.387400.503608.580607.54670HepG2SMN1
TPRG1LENSG00000158109.10551.61060848.21170-0.620803.493502.61060HepG2SNRNP70
TPRG1LENSG00000158109.101417.523201664.19490-0.231502.138401.70740HepG2SRSF1
TPRG1LENSG00000158109.101511.228001105.745700.450607.228306.28260HepG2SRSF5
TPRG1LENSG00000158109.10671.701701353.86540-1.0112026.3419024.96470HepG2SRSF9
TPRG1LENSG00000158109.101640.242101101.810300.5739011.8624010.94530HepG2SSB
TPRG1LENSG00000158109.10652.91430955.98880-0.550104.216102.65780HepG2SSRP1
TPRG1LENSG00000158109.101074.66530800.353900.425102.626601.96540HepG2SUPV3L1
TPRG1LENSG00000158109.10792.980401495.69560-0.9155021.9103020.54300HepG2TAF15
TPRG1LENSG00000158109.101258.23800750.476600.745406.875005.80100HepG2TARDBP
TPRG1LENSG00000158109.101514.60670938.994200.689703.114101.98430HepG2TBRG4
TPRG1LENSG00000158109.10970.216001374.49720-0.502506.245004.99500HepG2TIA1
TPRG1LENSG00000158109.101099.48690720.791000.609108.049007.27680HepG2TIAL1
TPRG1LENSG00000158109.10963.08510727.262500.405104.932704.22330HepG2TRIM56
TPRG1LENSG00000158109.101426.017501094.104200.382103.710302.68380HepG2TUFM
TPRG1LENSG00000158109.101430.54060884.137100.694107.628306.58850HepG2U2AF1
TPRG1LENSG00000158109.101567.140501092.383300.5206010.168408.97700HepG2UPF1
TPRG1LENSG00000158109.101042.11490732.855900.507802.777301.77140HepG2UPF2
TPRG1LENSG00000158109.101325.110601054.655900.329203.961603.26390HepG2UTP3
TPRG1LENSG00000158109.10864.23360563.316000.617404.112902.76890HepG2XPO5
TPRG1LENSG00000158109.101094.66610787.860900.474403.478702.67130HepG2XRN2
TPRG1LENSG00000158109.102446.745101201.415101.0260050.7745049.18880HepG2ZNF622
TPRG1LENSG00000158109.10540.03090365.726600.562203.797402.34100K562ABCF1
TPRG1LENSG00000158109.10539.48710386.590800.480703.924203.26970K562AGGF1
TPRG1LENSG00000158109.10444.64470332.029400.421203.081801.48140K562AKAP1
TPRG1LENSG00000158109.10584.92590402.260900.540004.066303.27340K562AKAP8L
TPRG1LENSG00000158109.101410.39760443.665701.6685026.2059024.59840K562AQR
TPRG1LENSG00000158109.10618.49480422.060400.551205.296203.98640K562ATP5C1
TPRG1LENSG00000158109.10174.04980269.56860-0.631203.793202.20180K562BCCIP
TPRG1LENSG00000158109.10494.38810237.374901.058409.922008.22080K562BOP1
TPRG1LENSG00000158109.10596.77230462.011200.369202.476301.37400K562CCDC124
TPRG1LENSG00000158109.10286.94240197.644000.537802.473801.48120K562CSTF2
TPRG1LENSG00000158109.101114.20900700.319600.669808.155606.51600K562CELF1
TPRG1LENSG00000158109.10529.77850336.433100.655005.888804.30160K562DDX3X
TPRG1LENSG00000158109.10753.22910569.434100.403503.112902.11900K562EIF4G2
TPRG1LENSG00000158109.10458.63910262.879900.802906.764305.39110K562FIP1L1
TPRG1LENSG00000158109.10515.20500256.820801.004309.830208.16760K562FMR1
TPRG1LENSG00000158109.10313.62030217.690000.526602.603101.71980K562FTO
TPRG1LENSG00000158109.10253.31480368.38480-0.540303.424702.22530K562HNRNPA1
TPRG1LENSG00000158109.10452.41530250.592700.852202.516101.36920K562HNRNPA2B1
TPRG1LENSG00000158109.10515.21690407.969200.336602.154001.36670K562HNRNPU
TPRG1LENSG00000158109.10697.17320426.914500.707507.102205.63220K562KIF1C
TPRG1LENSG00000158109.10302.05980205.772800.553702.171201.35540K562KRR1
TPRG1LENSG00000158109.10191.54200304.33240-0.668003.641101.90570K562LIN28B
TPRG1LENSG00000158109.10285.48800378.28870-0.406102.268001.50300K562MAGOH
TPRG1LENSG00000158109.10583.56530408.650000.513902.896201.79000K562MAK16
TPRG1LENSG00000158109.10233.45580377.51590-0.693405.263603.93680K562MATR3
TPRG1LENSG00000158109.10327.18540235.202800.476102.303601.50640K562METAP2
TPRG1LENSG00000158109.10505.81080350.983000.527104.013002.51480K562NCBP2
TPRG1LENSG00000158109.10164.21840249.76890-0.605002.763801.47210K562NONO
TPRG1LENSG00000158109.10430.67680262.574700.713803.170001.83610K562PABPC1
TPRG1LENSG00000158109.10423.98410219.045200.952703.205302.11920K562PABPN1
TPRG1LENSG00000158109.10500.93930246.571801.022509.217307.84370K562PRPF8
TPRG1LENSG00000158109.101266.77630621.274901.0278010.840109.20900K562PUF60
TPRG1LENSG00000158109.10882.71400660.970100.417303.149902.00830K562PUM1
TPRG1LENSG00000158109.10775.01740398.963300.9579011.3531010.30140K562PUS1
TPRG1LENSG00000158109.10640.14150388.704100.719606.939306.02820K562RBM15
TPRG1LENSG00000158109.10536.15520349.622000.616806.185105.00450K562SF3A3
TPRG1LENSG00000158109.10266.41270358.19820-0.427102.556301.65140K562SRPK2
TPRG1LENSG00000158109.10518.72200360.309600.525603.853003.02490K562SRSF1
TPRG1LENSG00000158109.10525.30580315.490600.735504.309802.68390K562STAU1
TPRG1LENSG00000158109.10676.17330275.134501.297206.840904.28670K562SUPT6H
TPRG1LENSG00000158109.10377.72700238.679500.662203.730602.53440K562SUPV3L1
TPRG1LENSG00000158109.10375.24160258.638300.536802.758701.82330K562TIAL1
TPRG1LENSG00000158109.10547.28220415.025200.399003.007301.68180K562TROVE2
TPRG1LENSG00000158109.10528.28200322.232300.713105.156803.51510K562UTP3
TPRG1LENSG00000158109.10499.24170321.435900.635105.386904.14450K562WDR3
TPRG1LENSG00000158109.101121.02330499.724901.1655021.9066019.33940K562ZC3H8
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for TPRG1L is not available on ENCORE database.





14 RBPs can affect the splicing of TPRG1L :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
MXETPRG1LENSG00000158109.10chr1+354198735420793542276354245335415653541837354406335442170.204000.000240.012531includedHepG2PTBP1
MXETPRG1LENSG00000158109.10chr1+35419873542079354227635424533541565354183735440633544217-0.131000.001240.097672includedHepG2FUBP3
MXETPRG1LENSG00000158109.10chr1+354198735420793542276354245335415653541837354406335442170.358000.000840.029451includedK562UCHL5
MXETPRG1LENSG00000158109.10chr1+35419873542079354227635424533541565354183735440633544217-0.173000.000010.000322includedHepG2SRSF1
MXETPRG1LENSG00000158109.10chr1+354198735420793542276354245335415653541837354406335442170.254000.000020.003381includedHepG2UCHL5
MXETPRG1LENSG00000158109.10chr1+354198735420793542276354245335415653541837354406335442170.193000.000350.029221includedHepG2IGF2BP3
MXETPRG1LENSG00000158109.10chr1+35419873542079354227635424533541565354183735440633544217-0.217000.000000.000392includedHepG2TAF15
MXETPRG1LENSG00000158109.10chr1+354198735420793542276354245335415653541837354406335442170.092000.001630.092491includedHepG2NOLC1
MXETPRG1LENSG00000158109.10chr1+354198735420793542276354245335415653541837354406335442170.289000.000000.000001includedHepG2XRN2
MXETPRG1LENSG00000158109.10chr1+354198735420793542276354245335415653541837354406335442170.276000.000000.000001includedHepG2DDX55
MXETPRG1LENSG00000158109.10chr1+354198735420793542276354245335415653541837354406335442170.201000.000010.000771includedHepG2PCBP1
MXETPRG1LENSG00000158109.10chr1+35419873542079354227635424533541565354183735440633544217-0.245000.000000.000132includedK562PUM1
MXETPRG1LENSG00000158109.10chr1+354198735420793542276354245335415653541837354406335442170.219000.000000.000251includedHepG2DDX3X
MXETPRG1LENSG00000158109.10chr1+354198735420793542276354245335415653541837354406335442170.194000.000050.003681includedHepG2SUPV3L1
MXETPRG1LENSG00000158109.10chr1+354198735420793542276354245335415653541837354406335442170.222000.000010.001491includedHepG2DDX6

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for TPRG1L is not avaliable on ENCORE database.