SUMO2

General Information

Gene Name       : SUMO2
Gene ID             : ENSG00000188612.11
Essential Gene : No

Functions

Localization

Domains (AlphaFold: SUMO2)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878SUMO2ENSG00000188612.11211.64180.58196.11ENCSR000AEF
HepG2SUMO2ENSG00000188612.11369.75352.72361.24ENCSR985KAT
K562SUMO2ENSG00000188612.11168.64176.25172.44ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for SUMO2 is not avaliable on ENCORE database.



Proteins bound to RNA
  • SUMO2 RNA is bound by 18 proteins.  







eCLIP assay for SUMO2 is not avaliable on ENCORE database.





18 proteins are bound to SUMO2 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr177316369373163817-3'-UTR,intron-Distal4.024593.69311HepG2CSTF2
chr177316409073164103-3'-UTR,intron-Distal3.547016.71517K562IGF2BP1
chr177316394073163964-3'-UTR,intron-Distal,intron-Proximal3.682674.44552K562APOBEC3C
chr177316428673164312-3'-UTR,intron-Distal,intron-Proximal3.4506938.48154K562PUM2
chr177316407273164090-3'-UTR,intron-Distal5.1322227.74401K562IGF2BP1
chr177316392373163960-3'-UTR,intron-Distal,intron-Proximal3.413693.36518K562IGF2BP1
chr177316392073163932-3'-UTR,intron-Distal,intron-Proximal3.480357.01381HepG2TIAL1
chr177316403773164095-3'-UTR,intron-Distal3.977336.33374K562TIA1
chr177316394873163962-3'-UTR,intron-Distal,intron-Proximal3.151526.59416HepG2TIAL1
chr177316392273163949-3'-UTR,intron-Distal,intron-Proximal3.746306.74069K562PABPC4
chr177316392173163940-3'-UTR,intron-Distal,intron-Proximal4.458943.64914K562APOBEC3C
chr177316392373163945-3'-UTR,intron-Distal,intron-Proximal3.023816.01570HepG2LARP4
chr177316424873164303-3'-UTR,intron-Distal,intron-Proximal4.0669612.10504K562TIA1
chr177316404173164069-3'-UTR,intron-Distal5.1413728.00960K562IGF2BP1
chr177316422673164253-3'-UTR,intron-Distal,intron-Proximal3.845485.92005K562IGF2BP1
chr177316394973163962-3'-UTR,intron-Distal,intron-Proximal3.502536.22037K562PABPC4
chr177316393273163948-3'-UTR,intron-Distal,intron-Proximal3.547827.01381HepG2TIAL1
chr177316423773164286-3'-UTR,intron-Distal,intron-Proximal3.5937040.09110K562PUM2
chr177316425373164310-3'-UTR,intron-Distal,intron-Proximal3.2000616.08114K562IGF2BP1
chr177317725873177283-5'-UTR,CDS,intron-Distal3.504106.71596K562UCHL5
chr177317842473178515-5'-UTR,intron-Distal5.3456213.10316HepG2EFTUD2
chr177317891173178982-5'-UTR,CDS,intron-Distal4.0220114.17782K562GEMIN5
chr177317890673178963-5'-UTR,CDS,intron-Distal3.131108.34744K562UCHL5
chr177317883473178945-5'-UTR,CDS,intron-Distal3.765159.54841HepG2PRPF8
chr177317084673170903-CDS,intron-Distal,intron-Proximal3.368947.41561K562IGF2BP1
chr177317084573170900-CDS,intron-Distal,intron-Proximal3.621017.64699K562IGF2BP2
chr177317715173177165-CDS,intron-Distal,intron-Proximal3.634653.67576K562IGF2BP2
chr177317889273178926-CDS,intron-Distal3.408275.93043HepG2AQR
chr177317079573170966-CDS,intron-Distal,intron-Proximal3.883827.84250HepG2AQR
chr177316447573164496-CDS,intron-Distal,intron-Proximal5.328137.30074K562IGF2BP1
chr177317885973178895-intron-Distal4.215489.80019K562AQR
chr177317704973177101-intron-Distal,intron-Proximal4.234823.11721K562AQR
chr177317073573170786-intron-Distal,intron-Proximal3.786905.32884K562KHSRP
chr177317833573178392-intron-Distal3.593605.58296HepG2EFTUD2
chr177316509573165151-intron-Distal4.121593.71997HepG2ILF3
chr177317882173178886-intron-Distal3.879557.78185HepG2RBM22
chr177317889573178909-intron-Distal4.492117.92018K562AQR
chr177317823673178312-intron-Distal4.262823.76710K562NONO
chr177317887073178892-intron-Distal3.930476.24305HepG2AQR
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for SUMO2 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for SUMO2 is not available on ENCORE database.

  • 112 RBPs can affect the levels of SUMO2.  








The Knockdown/knockout RNA-Seq assay for SUMO2 is not available on ENCORE database.





112 RBPs can affect the gene expression of SUMO2 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
SUMO2ENSG00000188612.74897.444606612.01730-0.433104.347903.18690HepG2ABCF1
SUMO2ENSG00000188612.76400.359808703.46160-0.443403.769703.16200HepG2AKAP1
SUMO2ENSG00000188612.72249.654704533.94140-1.0111047.8325045.29780HepG2AKAP8L
SUMO2ENSG00000188612.75382.370407201.42800-0.420004.068803.12450HepG2ASCC1
SUMO2ENSG00000188612.73367.061905966.69410-0.8254018.6363015.59670HepG2ATP5C1
SUMO2ENSG00000188612.76069.688706773.56640-0.158302.012201.40980HepG2AUH
SUMO2ENSG00000188612.73117.878704032.99550-0.371302.816101.91010HepG2BCLAF1
SUMO2ENSG00000188612.75605.786506841.83810-0.287502.235701.53560HepG2CIRBP
SUMO2ENSG00000188612.74001.003705554.70080-0.473302.758101.99430HepG2CNOT7
SUMO2ENSG00000188612.73517.590102867.041300.294902.662001.60420HepG2CSTF2
SUMO2ENSG00000188612.76161.075207317.07070-0.248105.651904.64520HepG2DAZAP1
SUMO2ENSG00000188612.74244.126105006.25790-0.238302.978401.78130HepG2DDX1
SUMO2ENSG00000188612.73643.070404305.45180-0.241002.003801.41520HepG2DDX21
SUMO2ENSG00000188612.75392.333108337.35280-0.628708.159207.13620HepG2DDX3X
SUMO2ENSG00000188612.74900.743807161.73460-0.547305.505704.66020HepG2DDX6
SUMO2ENSG00000188612.74316.377304908.97090-0.185602.020201.40970HepG2DNAJC21
SUMO2ENSG00000188612.73602.141804865.38630-0.4337014.0852012.73030HepG2DNAJC2
SUMO2ENSG00000188612.73468.126806884.97150-0.9893018.8739017.42320HepG2EIF2S1
SUMO2ENSG00000188612.73798.934007608.81030-1.0021016.3017014.76040HepG2EIF4A3
SUMO2ENSG00000188612.75616.586307408.03950-0.399402.551801.88950HepG2EIF4B
SUMO2ENSG00000188612.73906.300506915.03620-0.8239016.3325014.46750HepG2EIF4G2
SUMO2ENSG00000188612.76086.609107777.03820-0.353607.986507.05590HepG2ETF1
SUMO2ENSG00000188612.72949.402603617.48280-0.294603.298602.00790HepG2FAM120A
SUMO2ENSG00000188612.74406.030905837.38590-0.405802.472501.41510HepG2FUS
SUMO2ENSG00000188612.75533.374007676.64550-0.472305.070004.15420HepG2FXR1
SUMO2ENSG00000188612.74942.688807121.38540-0.526905.449804.52960HepG2G3BP1
SUMO2ENSG00000188612.76220.237107560.04000-0.281402.169301.38610HepG2G3BP2
SUMO2ENSG00000188612.74106.971005059.51280-0.300902.076101.51750HepG2GPKOW
SUMO2ENSG00000188612.73786.544605141.87870-0.441402.726401.62360HepG2GRSF1
SUMO2ENSG00000188612.74111.820304955.99760-0.269402.635302.00240HepG2HNRNPA1
SUMO2ENSG00000188612.74322.847905512.55240-0.350703.857903.04980HepG2HNRNPC
SUMO2ENSG00000188612.74926.738805844.21930-0.246403.674202.85770HepG2HNRNPF
SUMO2ENSG00000188612.75747.633407210.64850-0.327203.132602.39060HepG2HNRNPK
SUMO2ENSG00000188612.75613.590406665.31590-0.247705.881504.92990HepG2HNRNPL
SUMO2ENSG00000188612.74040.834704828.37850-0.256901.879901.35160HepG2HNRNPLL
SUMO2ENSG00000188612.74633.379405476.11250-0.241104.039503.31830HepG2HNRNPU
SUMO2ENSG00000188612.74249.594405754.90890-0.437506.902305.80470HepG2IGF2BP1
SUMO2ENSG00000188612.74017.813007238.79350-0.8493014.5837013.17210HepG2IGF2BP2
SUMO2ENSG00000188612.75080.427805593.68110-0.138802.099801.45160HepG2ILF2
SUMO2ENSG00000188612.74263.851907280.87550-0.772008.467806.63060HepG2KHSRP
SUMO2ENSG00000188612.76347.240708207.13020-0.370702.536301.74240HepG2LARP4
SUMO2ENSG00000188612.74184.374007679.32410-0.8760014.9117013.44480HepG2MAGOH
SUMO2ENSG00000188612.74739.758607722.35720-0.704208.895807.81690HepG2MATR3
SUMO2ENSG00000188612.74496.135505403.54030-0.265202.623701.83630HepG2MSI2
SUMO2ENSG00000188612.74233.279807904.30500-0.9009015.0109013.61710HepG2NCBP2
SUMO2ENSG00000188612.75939.667107255.58790-0.288703.918003.01040HepG2NOL12
SUMO2ENSG00000188612.73779.602407039.49670-0.8972015.1770013.53090HepG2PABPC4
SUMO2ENSG00000188612.74113.337006743.36240-0.7132025.8880024.34980HepG2PCBP1
SUMO2ENSG00000188612.73867.569304884.26850-0.336705.367804.37100HepG2PPIL4
SUMO2ENSG00000188612.76162.307705254.582300.229803.430002.57810HepG2PRPF4
SUMO2ENSG00000188612.72817.214703520.53300-0.321502.260601.52770HepG2PRPF8
SUMO2ENSG00000188612.74207.473206861.85570-0.7056026.3659025.01000HepG2PTBP1
SUMO2ENSG00000188612.75075.157106926.07100-0.448606.475005.61470HepG2PUF60
SUMO2ENSG00000188612.76059.731307352.30360-0.278907.691806.80550HepG2PUM1
SUMO2ENSG00000188612.73851.333304596.55650-0.255204.592403.83650HepG2PUS1
SUMO2ENSG00000188612.74912.415107431.06400-0.5971014.7860013.50400HepG2QKI
SUMO2ENSG00000188612.75114.653906744.35530-0.399005.411204.49660HepG2RBM25
SUMO2ENSG00000188612.75794.408507636.39360-0.398209.762008.85980HepG2NELFE
SUMO2ENSG00000188612.75463.060807112.61300-0.380708.142307.16860HepG2RECQL
SUMO2ENSG00000188612.74922.404406295.33790-0.354903.774302.99670HepG2RPLP0
SUMO2ENSG00000188612.72284.484603938.40090-0.7857017.2619015.91990HepG2RPS19
SUMO2ENSG00000188612.73861.773404871.52400-0.335102.968802.14170HepG2RPS2
SUMO2ENSG00000188612.73665.545805576.94980-0.605405.213404.11330HepG2RPS3A
SUMO2ENSG00000188612.72327.707803482.57260-0.581205.721304.63070HepG2RRP9
SUMO2ENSG00000188612.74116.485904876.76670-0.244504.592003.79670HepG2SAFB2
SUMO2ENSG00000188612.74418.086707143.66090-0.6932027.8041026.26740HepG2SF3B4
SUMO2ENSG00000188612.75534.323406640.96770-0.263006.196005.21250HepG2SLBP
SUMO2ENSG00000188612.74704.516805687.21220-0.273707.058106.10430HepG2SMN1
SUMO2ENSG00000188612.76546.318207341.65010-0.165402.465001.98230HepG2SRFBP1
SUMO2ENSG00000188612.72517.715704346.36400-0.7877010.924908.10560HepG2SRP68
SUMO2ENSG00000188612.76414.150907456.60540-0.217303.628503.10510HepG2SRSF1
SUMO2ENSG00000188612.76087.053106838.45430-0.167902.200501.63510HepG2SRSF5
SUMO2ENSG00000188612.74490.925705741.67890-0.354507.221906.17990HepG2SRSF7
SUMO2ENSG00000188612.75045.272906066.49220-0.265904.984104.28350HepG2SRSF9
SUMO2ENSG00000188612.75450.887306374.24060-0.225803.833703.25210HepG2SSB
SUMO2ENSG00000188612.77100.531007777.23390-0.131301.869701.33980HepG2SUCLG1
SUMO2ENSG00000188612.72432.292003044.89760-0.324102.313301.39510HepG2TFIP11
SUMO2ENSG00000188612.74695.609906158.42230-0.391205.312004.16590HepG2TIA1
SUMO2ENSG00000188612.73199.083105321.36130-0.7341019.0396017.94440HepG2TIAL1
SUMO2ENSG00000188612.73974.089305368.61400-0.4339011.0848010.06810HepG2TRIM56
SUMO2ENSG00000188612.75403.679107162.13580-0.406403.647502.67930HepG2UBE2L3
SUMO2ENSG00000188612.71783.501902683.60340-0.589506.545705.36840HepG2UCHL5
SUMO2ENSG00000188612.74417.776805147.49620-0.220603.591702.81230HepG2UPF1
SUMO2ENSG00000188612.74746.010405661.27190-0.254405.988005.26360HepG2ZNF622
SUMO2ENSG00000188612.75660.459107917.57600-0.484106.179204.35860K562ABCF1
SUMO2ENSG00000188612.712673.098707445.041300.7673039.2104037.13720K562AGGF1
SUMO2ENSG00000188612.710826.155008181.060600.404105.105903.67300K562AKAP8
SUMO2ENSG00000188612.73796.579104468.30230-0.235003.698402.58130K562BCLAF1
SUMO2ENSG00000188612.72281.823202799.11940-0.294802.257101.32200K562CCAR1
SUMO2ENSG00000188612.76115.409707978.59990-0.383708.809707.72970K562DDX47
SUMO2ENSG00000188612.72427.710003133.59140-0.368203.096201.68670K562DHX30
SUMO2ENSG00000188612.710445.880508336.113100.325406.053304.68100K562DKC1
SUMO2ENSG00000188612.72815.493503531.10140-0.326702.694001.79320K562EFTUD2
SUMO2ENSG00000188612.74810.115905604.48940-0.220502.731802.01680K562EIF2S2
SUMO2ENSG00000188612.73302.138003798.38540-0.202002.197601.48260K562EIF3G
SUMO2ENSG00000188612.77914.401609273.03640-0.228603.095102.10460K562EIF4G2
SUMO2ENSG00000188612.76181.724505093.536500.279202.768501.33510K562G3BP1
SUMO2ENSG00000188612.73879.754005027.10720-0.373804.298903.31460K562GPKOW
SUMO2ENSG00000188612.79834.685405542.858400.827104.472602.80760K562HNRNPA2B1
SUMO2ENSG00000188612.73759.604404897.48460-0.381504.889704.11810K562HNRNPC
SUMO2ENSG00000188612.79899.959407716.535300.359403.808602.87920K562HSPD1
SUMO2ENSG00000188612.711921.709908221.348800.536009.367607.61090K562KIF1C
SUMO2ENSG00000188612.74731.535205599.21220-0.242902.183301.43200K562MAGOH
SUMO2ENSG00000188612.710252.173407869.913600.381403.374202.15090K562MAK16
SUMO2ENSG00000188612.74674.367505588.08460-0.257602.521401.64420K562MATR3
SUMO2ENSG00000188612.73977.690604906.98970-0.302903.148002.21060K562METAP2
SUMO2ENSG00000188612.74326.624905501.91430-0.346705.418404.31020K562MTPAP
SUMO2ENSG00000188612.79131.240206455.547800.500204.215803.06010K562NAA15
SUMO2ENSG00000188612.75437.817306113.07850-0.168903.489802.66140K562NSUN2
SUMO2ENSG00000188612.78149.503804846.465000.749702.911001.88750K562PABPN1
SUMO2ENSG00000188612.73931.790805055.85960-0.362804.887003.81910K562POLR2G
SUMO2ENSG00000188612.77952.701706461.451200.299502.687201.88120K562PPIG
SUMO2ENSG00000188612.74398.779005439.87160-0.306503.461902.72970K562PTBP1
SUMO2ENSG00000188612.78415.2290010117.56290-0.265802.725801.91610K562PUF60
SUMO2ENSG00000188612.712873.7180010761.755600.258403.097801.96730K562PUM1
SUMO2ENSG00000188612.715126.618707682.673000.9773024.3374022.73150K562PUS1
SUMO2ENSG00000188612.711703.498807485.731700.6446019.1087017.51600K562RBM15
SUMO2ENSG00000188612.74489.852105489.88330-0.290102.305301.32800K562NELFE
SUMO2ENSG00000188612.71288.641003500.19890-1.4416030.1041027.47880K562RPS19
SUMO2ENSG00000188612.73907.296805597.71440-0.518706.405104.79980K562RPS3
SUMO2ENSG00000188612.74632.675503513.420800.398902.657401.35590K562RRP9
SUMO2ENSG00000188612.72646.554603431.14450-0.374603.482601.61340K562SRP68
SUMO2ENSG00000188612.75475.841206180.03400-0.174502.856101.90850K562SRPK2
SUMO2ENSG00000188612.74460.650105332.71700-0.257602.630801.93940K562SRSF1
SUMO2ENSG00000188612.74822.742003918.040600.299604.299102.65730K562SSB
SUMO2ENSG00000188612.79991.289706087.931400.714603.113201.56850K562SUPT6H
SUMO2ENSG00000188612.74304.091105397.42570-0.326602.866602.14740K562TARDBP
SUMO2ENSG00000188612.76122.254504709.995500.378203.003101.85370K562U2AF1
SUMO2ENSG00000188612.75825.990804864.461300.260102.882602.06310K562U2AF2
SUMO2ENSG00000188612.75755.715306481.83010-0.171402.296901.63840K562UPF1
SUMO2ENSG00000188612.74459.546505546.29190-0.314603.583302.58900K562WDR3
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for SUMO2 is not available on ENCORE database.





1 RBPs can affect the splicing of SUMO2 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SESUMO2ENSG00000188612.7chr17-7317739073177494731771517317728373178476731786580.051000.010700.08571includedK562AQR

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for SUMO2 is not avaliable on ENCORE database.