RHBDF2

General Information

Gene Name       : RHBDF2
Gene ID             : ENSG00000129667.12
Essential Gene : No

Functions

Localization

Domains (AlphaFold: RHBDF2)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878RHBDF2ENSG00000129667.122.348.785.56ENCSR000AEF
HepG2RHBDF2ENSG00000129667.1217.486.2111.85ENCSR985KAT
K562RHBDF2ENSG00000129667.121.150.861.00ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for RHBDF2 is not avaliable on ENCORE database.



Proteins bound to RNA
  • RHBDF2 RNA is bound by 22 proteins.  







eCLIP assay for RHBDF2 is not avaliable on ENCORE database.





22 proteins are bound to RHBDF2 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr177446728174467430-3'-UTR,intron-Distal4.913927.39978HepG2UPF1
chr177446770774467774-3'-UTR,CDS,intron-Distal3.902413.02397HepG2SND1
chr177448378874483940-3'-UTR,5'-UTR,intron-Distal,intron-Proximal3.9483710.61473HepG2GRWD1
chr177449727874497368-5'-UTR,intron-Distal3.253848.71903HepG2CSTF2T
chr177449721574497265-5'-UTR,intron-Distal3.458566.57490HepG2CSTF2T
chr177449712574497175-5'-UTR,intron-Distal3.471677.01804HepG2CSTF2T
chr177448913274489195-5'-UTR,intron-Distal3.546524.34707HepG2HNRNPK
chr177448924474489266-5'-UTR,intron-Distal,intron-Proximal3.156944.46520HepG2CSTF2T
chr177449736874497455-5'-UTR,intron-Distal,intron-Proximal3.6096712.53198HepG2CSTF2T
chr177449737974497445-5'-UTR,intron-Distal4.239203.86455HepG2GTF2F1
chr177449737074497460-5'-UTR,intron-Distal,intron-Proximal3.758378.46171HepG2NCBP2
chr177447337674473454-CDS,intron-Distal,intron-Proximal3.904533.01266HepG2SF3B4
chr177447587074475921-CDS,intron-Distal3.267183.05161HepG2PPIG
chr177447365574473740-CDS,intron-Distal,intron-Proximal3.336053.51682HepG2RBFOX2
chr177447581574476011-CDS,intron-Distal,intron-Proximal3.282514.20336HepG2AQR
chr177447483974474894-CDS,intron-Distal,intron-Proximal4.072514.45914HepG2PRPF8
chr177447051374470602-CDS,intron-Distal3.939936.36347HepG2PPIG
chr177448992774489973-intron-Distal4.292577.96122HepG2CSTF2T
chr177448831874488384-intron-Distal3.751438.38945HepG2CSTF2T
chr177449495574494996-intron-Distal4.3289624.55972HepG2HNRNPL
chr177448863174488733-intron-Distal4.0854415.55929HepG2NKRF
chr177448201574482101-intron-Distal3.562723.59783HepG2HNRNPK
chr177449111474491148-intron-Distal3.062854.24473HepG2CSTF2T
chr177449017974490228-intron-Distal3.612278.62898HepG2CSTF2T
chr177449510474495174-intron-Distal4.378977.64658HepG2HNRNPL
chr177449422774494292-intron-Distal3.361099.78123HepG2CSTF2T
chr177449469874494753-intron-Distal4.801966.13530HepG2GTF2F1
chr177449487174494914-intron-Distal7.3672033.59048HepG2HNRNPL
chr177449482574494871-intron-Distal5.7804531.05294HepG2HNRNPL
chr177448821174488289-intron-Distal4.060386.96229HepG2CSTF2T
chr177448674974486803-intron-Distal3.858963.79474HepG2FAM120A
chr177449688374497003-intron-Distal4.1299214.11928HepG2CSTF2T
chr177449348374493540-intron-Distal4.850895.16513HepG2HNRNPM
chr177449358974493634-intron-Distal3.031495.98080HepG2CSTF2T
chr177447028774470432-intron-Distal,intron-Proximal3.166253.60809HepG2HNRNPK
chr177448972174489789-intron-Distal3.011763.85378HepG2CSTF2T
chr177449429274494339-intron-Distal3.8628110.72597HepG2CSTF2T
chr177448674974486801-intron-Distal4.043967.68837HepG2CSTF2T
chr177448863974488699-intron-Distal3.149203.89459HepG2XRN2
chr177449342874493511-intron-Distal4.602863.82670HepG2SFPQ
chr177449363474493670-intron-Distal3.187685.15590HepG2CSTF2T
chr177448782674487873-intron-Distal4.229906.48652HepG2CSTF2T
chr177449629974496360-intron-Distal3.219306.76601HepG2CSTF2T
chr177448660874486651-intron-Distal4.893616.84460HepG2CSTF2T
chr177449519374495215-intron-Distal4.735604.26705HepG2AGGF1
chr177448858074488677-intron-Distal3.456495.62025HepG2HNRNPUL1
chr177448764474487672-intron-Distal4.543174.10564HepG2CSTF2T
chr177449475574494800-intron-Distal3.221867.52028HepG2AGGF1
chr177448972474489893-intron-Distal3.523463.54181HepG2SFPQ
chr177449481874494913-intron-Distal4.757406.08124K562AGGF1
chr177449493874494955-intron-Distal4.0705217.76680HepG2HNRNPL
chr177448855174488611-intron-Distal4.598388.42985HepG2CSTF2T
chr177448863774488740-intron-Distal3.836168.63117HepG2FAM120A
chr177448889174488996-intron-Distal4.5672810.67708HepG2HNRNPK
chr177449469474494754-intron-Distal3.346846.32590HepG2HNRNPL
chr177449543174495475-intron-Distal3.355335.43093HepG2CSTF2T
chr177448863874488701-intron-Distal4.9883912.81546HepG2CSTF2T
chr177449334774493398-intron-Distal3.453044.76031HepG2XRN2
chr177449348074493524-intron-Distal3.408797.23670HepG2CSTF2T
chr177449491474494938-intron-Distal4.7592019.53774HepG2HNRNPL
chr177448934774489396-intron-Distal,intron-Proximal3.395364.36453HepG2CSTF2T
chr177449461074494642-intron-Distal3.479554.51091HepG2HNRNPL
chr177449482574494869-intron-Distal4.700255.82840HepG2GTF2F1
chr177449657874496678-intron-Distal3.7067211.92749HepG2CSTF2T
chr177448864074488734-intron-Distal3.715935.95033HepG2FKBP4
chr177448804174488120-intron-Distal3.4689110.39376HepG2CSTF2T
chr177449690674496956-intron-Distal4.255413.58513HepG2GTF2F1
chr177448938474489519-intron-Distal3.751084.63569HepG2RBFOX2
chr177449659874496669-intron-Distal3.640355.81632HepG2FUS
chr177448964074489669-intron-Distal3.732644.35339HepG2CSTF2T
chr177448725074487312-intron-Distal3.393666.22729HepG2CSTF2T
chr177448675074486810-intron-Distal3.177245.15026HepG2NKRF
chr177449475474494802-intron-Distal5.4580411.15661HepG2HNRNPL
chr177448832774488385-intron-Distal3.785245.61426HepG2FKBP4
chr177449387474493920-intron-Distal3.958206.96229HepG2CSTF2T
chr177449181474491856-intron-Distal3.346654.88713HepG2CSTF2T
chr177449338274493464-intron-Distal3.608485.75313HepG2NKRF
chr177449004374490087-intron-Distal3.147825.44187HepG2CSTF2T
chr177448939674489454-intron-Distal3.821255.36249HepG2CSTF2T
chr177449657774496662-intron-Distal3.940026.90583HepG2GTF2F1
chr177448687274486894-intron-Distal4.497564.61649HepG2CSTF2T
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for RHBDF2 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for RHBDF2 is not available on ENCORE database.

  • 108 RBPs can affect the levels of RHBDF2.  








The Knockdown/knockout RNA-Seq assay for RHBDF2 is not available on ENCORE database.





108 RBPs can affect the gene expression of RHBDF2 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
RHBDF2ENSG00000129667.81187.63270560.242601.0839014.9286013.75440HepG2ACO1
RHBDF2ENSG00000129667.81156.27060437.472701.402108.872107.97880HepG2AKAP1
RHBDF2ENSG00000129667.81435.40500920.003600.641605.725004.25260HepG2AKAP8
RHBDF2ENSG00000129667.8826.56820562.783900.554507.163505.99490HepG2AKAP8L
RHBDF2ENSG00000129667.8725.76490361.905801.003804.440503.45540HepG2ASCC1
RHBDF2ENSG00000129667.81405.30520763.606300.879905.811804.87830HepG2AUH
RHBDF2ENSG00000129667.8667.40490318.709001.066209.217607.46180HepG2BCCIP
RHBDF2ENSG00000129667.8398.27880525.01280-0.398602.275401.72690HepG2BOP1
RHBDF2ENSG00000129667.8918.39470560.011600.7136013.3946012.15960HepG2CKAP4
RHBDF2ENSG00000129667.8960.98300565.930800.763803.662802.39440HepG2CPSF7
RHBDF2ENSG00000129667.8114.95300196.82680-0.775903.748202.51480HepG2CSTF2
RHBDF2ENSG00000129667.8988.33100387.515901.3506035.6784033.90540HepG2CELF1
RHBDF2ENSG00000129667.8162.57740336.13860-1.047904.149003.01960HepG2DDX24
RHBDF2ENSG00000129667.8804.17880418.923700.940704.004403.26320HepG2DDX3X
RHBDF2ENSG00000129667.8475.92420347.969400.451702.826501.45750HepG2DDX52
RHBDF2ENSG00000129667.81214.85550313.370901.9547034.5085032.28540HepG2DDX55
RHBDF2ENSG00000129667.8292.29240521.63650-0.835607.543305.95450HepG2DDX5
RHBDF2ENSG00000129667.81712.09310360.198702.2488043.6908041.67970HepG2DDX6
RHBDF2ENSG00000129667.8233.91950535.97210-1.1961013.7804012.50630HepG2DKC1
RHBDF2ENSG00000129667.8515.15500273.562000.9130011.4337010.08250HepG2DNAJC21
RHBDF2ENSG00000129667.8564.63620271.165401.0580018.7353017.18490HepG2DNAJC2
RHBDF2ENSG00000129667.8636.43930345.935700.879403.305802.66150HepG2EIF2S1
RHBDF2ENSG00000129667.8748.70840336.943901.151807.378405.96310HepG2EIF3D
RHBDF2ENSG00000129667.81088.79140372.372501.547806.803305.75650HepG2EIF4B
RHBDF2ENSG00000129667.8553.77260411.068700.429803.815002.86110HepG2EIF4G1
RHBDF2ENSG00000129667.8343.93810595.50650-0.792002.385401.37010HepG2ESF1
RHBDF2ENSG00000129667.81068.78940876.790400.285602.331901.77180HepG2ETF1
RHBDF2ENSG00000129667.8481.00000301.211300.675206.010704.24780HepG2FAM120A
RHBDF2ENSG00000129667.81601.47200694.434601.205406.404305.28000HepG2FIP1L1
RHBDF2ENSG00000129667.8542.48820381.766200.506802.220801.50970HepG2FUBP3
RHBDF2ENSG00000129667.8608.60320335.892400.857402.759101.64570HepG2FUS
RHBDF2ENSG00000129667.81080.78070357.860701.5945018.5484016.90260HepG2G3BP1
RHBDF2ENSG00000129667.8753.20460546.371700.463102.453101.84650HepG2GPKOW
RHBDF2ENSG00000129667.8634.96350316.990201.002104.001502.13570HepG2GTF2F1
RHBDF2ENSG00000129667.8682.50460534.805000.351703.106902.07520HepG2HDGF
RHBDF2ENSG00000129667.8573.89330382.913300.583706.018604.73540HepG2HNRNPA2B1
RHBDF2ENSG00000129667.81136.40770362.963401.6465019.9412018.21950HepG2HNRNPK
RHBDF2ENSG00000129667.8643.32730305.177301.0758019.2022017.71840HepG2HNRNPU
RHBDF2ENSG00000129667.8693.03020363.666600.930203.987103.19060HepG2IGF2BP2
RHBDF2ENSG00000129667.8463.10400311.727500.571005.717604.69650HepG2ILF2
RHBDF2ENSG00000129667.8761.28770365.956601.056704.776703.42250HepG2KHSRP
RHBDF2ENSG00000129667.8712.66830512.064000.476805.763804.30790HepG2KIF1C
RHBDF2ENSG00000129667.8640.20960307.293001.058808.554906.66380HepG2LARP7
RHBDF2ENSG00000129667.8871.54970388.267601.166405.948605.04910HepG2MATR3
RHBDF2ENSG00000129667.8720.94190352.618201.031707.306505.68700HepG2METAP2
RHBDF2ENSG00000129667.81189.83310561.565101.0831010.329608.86720HepG2MSI2
RHBDF2ENSG00000129667.81294.15300413.125001.6473016.7534014.97300HepG2NOL12
RHBDF2ENSG00000129667.8649.65470287.824901.174403.970902.64230HepG2NONO
RHBDF2ENSG00000129667.8206.06500462.33300-1.1658011.051209.64320HepG2NSUN2
RHBDF2ENSG00000129667.8859.26310353.570001.281008.145006.92180HepG2PABPC4
RHBDF2ENSG00000129667.8581.60070302.065400.9451011.141709.63240HepG2PARN
RHBDF2ENSG00000129667.8737.91010411.553900.842306.579405.70480HepG2PCBP1
RHBDF2ENSG00000129667.8484.65560272.192700.832209.519408.19450HepG2PPIL4
RHBDF2ENSG00000129667.8233.64290549.96790-1.2350020.4640018.70400HepG2PRPF4
RHBDF2ENSG00000129667.8645.27100418.798300.623507.294306.48920HepG2PTBP1
RHBDF2ENSG00000129667.8996.33990418.666901.2507039.1687037.46620HepG2PUM1
RHBDF2ENSG00000129667.81046.46630418.350701.3226029.9255027.88490HepG2PUM2
RHBDF2ENSG00000129667.8327.14040570.62740-0.8026010.735809.65890HepG2PUS1
RHBDF2ENSG00000129667.8850.84230453.511700.9077012.9210011.71430HepG2QKI
RHBDF2ENSG00000129667.81767.76390718.839201.2981037.2843034.84460HepG2RBM15
RHBDF2ENSG00000129667.81656.38810732.820301.1764034.0138032.58750HepG2RBM22
RHBDF2ENSG00000129667.8659.72020411.612600.680501.980101.40240HepG2RBM25
RHBDF2ENSG00000129667.8566.96060466.060000.282601.835301.37480HepG2NELFE
RHBDF2ENSG00000129667.8820.89090327.895701.3239022.8788021.38100HepG2RPS19
RHBDF2ENSG00000129667.8819.79150348.875101.2324012.8928010.59640HepG2RPS5
RHBDF2ENSG00000129667.8483.84000239.051601.017102.880702.08030HepG2RRP9
RHBDF2ENSG00000129667.8492.25390271.770200.8569010.949709.80120HepG2SAFB2
RHBDF2ENSG00000129667.8594.81400329.039900.854103.258802.23490HepG2SERBP1
RHBDF2ENSG00000129667.8263.47300444.07650-0.753204.413203.55090HepG2SF3A3
RHBDF2ENSG00000129667.8271.25390516.09480-0.928008.452007.28270HepG2SF3B1
RHBDF2ENSG00000129667.8735.62510435.974900.7546010.676909.63260HepG2SF3B4
RHBDF2ENSG00000129667.8539.40070378.182000.512205.282604.36470HepG2SLBP
RHBDF2ENSG00000129667.8797.64740316.923701.3315034.4513032.61490HepG2SMN1
RHBDF2ENSG00000129667.8798.57330313.897401.347006.536505.01170HepG2SMNDC1
RHBDF2ENSG00000129667.8636.70380270.381001.235504.521402.75820HepG2SNRNP200
RHBDF2ENSG00000129667.81173.52210574.246301.031009.097607.68800HepG2SNRNP70
RHBDF2ENSG00000129667.81508.39200827.668400.8658022.8066021.73020HepG2SRFBP1
RHBDF2ENSG00000129667.8251.25290455.08310-0.857008.513107.78700HepG2SRSF1
RHBDF2ENSG00000129667.8772.64820555.322000.476402.573301.61090HepG2SRSF3
RHBDF2ENSG00000129667.81590.15680389.411402.0297099.4520096.52860HepG2SRSF5
RHBDF2ENSG00000129667.8714.49650370.251300.9483017.4884016.31870HepG2SRSF9
RHBDF2ENSG00000129667.8273.57660718.56830-1.3932023.8346022.65830HepG2SSB
RHBDF2ENSG00000129667.8912.27970463.410600.977102.945101.67400HepG2STAU1
RHBDF2ENSG00000129667.81304.61040442.850801.5586061.7600059.55470HepG2SUCLG1
RHBDF2ENSG00000129667.8697.64940468.516800.574302.557301.65260HepG2SUPT6H
RHBDF2ENSG00000129667.81180.60450311.934601.9201033.7122031.85650HepG2SUPV3L1
RHBDF2ENSG00000129667.8555.35770209.065901.4094016.1205014.14340HepG2TFIP11
RHBDF2ENSG00000129667.8705.82820375.850200.909104.002103.00250HepG2TIA1
RHBDF2ENSG00000129667.8573.62690296.513200.9519011.9484011.03720HepG2TIAL1
RHBDF2ENSG00000129667.81250.60130299.189202.0634064.2399062.02570HepG2TRIM56
RHBDF2ENSG00000129667.8544.72890385.318500.499403.790902.75250HepG2TUFM
RHBDF2ENSG00000129667.8278.10950593.77890-1.094303.020602.36480HepG2U2AF1
RHBDF2ENSG00000129667.81226.49210407.871701.588305.923304.66700HepG2UBE2L3
RHBDF2ENSG00000129667.8536.64280184.254901.5422020.2638018.26080HepG2UCHL5
RHBDF2ENSG00000129667.8726.83390393.828800.8840015.3612013.97100HepG2UPF1
RHBDF2ENSG00000129667.8196.00320285.58070-0.543002.292501.38440HepG2UPF2
RHBDF2ENSG00000129667.8536.11200404.795200.405203.050401.95550HepG2UTP18
RHBDF2ENSG00000129667.8290.50040380.22500-0.388302.229301.67880HepG2UTP3
RHBDF2ENSG00000129667.8202.44510307.06610-0.601003.068302.30580HepG2XRN2
RHBDF2ENSG00000129667.8776.42160542.731200.516506.722405.75050HepG2ZC3H8
RHBDF2ENSG00000129667.8808.15380433.135200.8997018.7034017.59480HepG2ZNF622
RHBDF2ENSG00000129667.845.9251019.240201.255102.260701.39320K562BCLAF1
RHBDF2ENSG00000129667.8100.3110034.166201.553706.104804.42770K562CPEB4
RHBDF2ENSG00000129667.897.0608035.352101.457005.883404.98410K562DDX47
RHBDF2ENSG00000129667.886.2382026.447901.705104.600503.27240K562EIF3A
RHBDF2ENSG00000129667.8126.6735042.335701.581106.719605.53370K562GRSF1
RHBDF2ENSG00000129667.845.9068020.480301.164401.973801.45820K562HNRNPC
RHBDF2ENSG00000129667.840.8588014.662101.478502.235201.40560K562KRR1
RHBDF2ENSG00000129667.850.2192016.758201.583303.343602.37900K562METAP2
RHBDF2ENSG00000129667.830.509909.077401.748802.949802.26660K562PTBP1
RHBDF2ENSG00000129667.8121.7505046.392201.391906.014604.58240K562PUM2
RHBDF2ENSG00000129667.838.546408.712502.145304.594403.47970K562RBM22
RHBDF2ENSG00000129667.886.2072016.741102.364307.911206.51700K562RPS19
RHBDF2ENSG00000129667.882.9501038.839801.094603.224301.60820K562SUCLG1
RHBDF2ENSG00000129667.871.6842018.768701.933206.078604.55430K562TRIM56
RHBDF2ENSG00000129667.845.5109017.158101.407202.618801.45330K562XRN2
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for RHBDF2 is not available on ENCORE database.





9 RBPs can affect the splicing of RHBDF2 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
RIRHBDF2ENSG00000129667.8chr17-744687677446918774468767744689217446908674469187-0.192000.001730.08091excludedHepG2TBRG4
RIRHBDF2ENSG00000129667.8chr17-7446876774469187744687677446892174469086744691870.247000.004530.07016includedHepG2PCBP2
RIRHBDF2ENSG00000129667.8chr17-7446876774469187744687677446892174469086744691870.331000.000370.00656includedHepG2PRPF8
RIRHBDF2ENSG00000129667.8chr17-7446876774469187744687677446892174469086744691870.305000.000030.00072includedHepG2PCBP1
RIRHBDF2ENSG00000129667.8chr17-7446876774469187744687677446892174469086744691870.175000.004580.04707includedHepG2QKI
RIRHBDF2ENSG00000129667.8chr17-7446876774469187744687677446892174469086744691870.336000.002970.04756includedHepG2TIAL1
RIRHBDF2ENSG00000129667.8chr17-7446876774469187744687677446892174469086744691870.254000.000520.00539includedHepG2SF3B4
RIRHBDF2ENSG00000129667.8chr17-7446876774469187744687677446892174469086744691870.164000.005230.05111includedHepG2HNRNPK
RIRHBDF2ENSG00000129667.8chr17-7446876774469187744687677446892174469086744691870.206000.001750.07346includedHepG2LARP4

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for RHBDF2 is not avaliable on ENCORE database.