NHP2L1

General Information

Gene Name       : NHP2L1
Gene ID             :
Essential Gene : No

Functions

Localization

Domains (AlphaFold: NHP2L1)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for NHP2L1 is not avaliable on ENCORE database.



Proteins bound to RNA
  • NHP2L1 RNA is bound by 19 proteins.  







eCLIP assay for NHP2L1 is not avaliable on ENCORE database.





19 proteins are bound to NHP2L1 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr224207034642070378-3'-UTR,intron-Distal3.883795.19325HepG2LARP4
chr224207083342070946-3'-UTR,CDS,intron-Distal,intron-Proximal4.47224400.00000K562PUM2
chr224207089542070968-3'-UTR,CDS,intron-Distal,intron-Proximal3.344205.18199HepG2YBX3
chr224207066642070782-3'-UTR,intron-Distal,intron-Proximal3.7399413.41537HepG2PCBP2
chr224207081842070938-3'-UTR,intron-Distal,intron-Proximal3.645636.67652K562APOBEC3C
chr224207008042070149-3'-UTR,intron-Distal4.466673.47885K562LIN28B
chr224207089242070944-3'-UTR,CDS,intron-Distal,intron-Proximal3.3989316.09608K562YBX3
chr224207024842070386-3'-UTR,intron-Distal4.267533.92497HepG2UPF1
chr224207086042070960-3'-UTR,CDS,intron-Distal,intron-Proximal4.6261024.33511HepG2LARP4
chr224207065342070812-3'-UTR,intron-Distal,intron-Proximal4.616824.78313HepG2UPF1
chr224207033142070403-3'-UTR,intron-Distal3.324424.03249HepG2FUBP3
chr224207033142070437-3'-UTR,intron-Distal3.715228.58246HepG2SUB1
chr224207083642070860-3'-UTR,intron-Distal,intron-Proximal4.613764.60160HepG2LARP4
chr224207022842070283-3'-UTR,intron-Distal4.600464.90799K562UPF1
chr224208479742084873-5'-UTR,CDS,intron-Distal,intron-Proximal4.489457.12467HepG2DDX3X
chr224208479742084800-5'-UTR,CDS,intron-Distal3.790956.42513K562YBX3
chr224208480042084808-5'-UTR,intron-Distal4.4674816.67265K562YBX3
chr224208480842084832-5'-UTR,intron-Distal,intron-Proximal3.9998513.79838K562YBX3
chr224208474442084825-5'-UTR,CDS,intron-Distal,intron-Proximal5.459988.72621HepG2PRPF8
chr224208479642084873-5'-UTR,CDS,intron-Distal,intron-Proximal3.6113226.02594K562DDX3X
chr224207836842078441-5'-UTR,intron-Distal4.6648018.35089K562DDX3X
chr224208476542084857-5'-UTR,CDS,intron-Distal,intron-Proximal4.213724.10386HepG2NCBP2
chr224208483242084851-5'-UTR,intron-Distal,intron-Proximal3.7291410.61370K562YBX3
chr224207634642076369-CDS,intron-Distal,intron-Proximal3.5459222.39901K562DDX3X
chr224207101642071160-CDS,intron-Distal3.782505.71420K562RBM15
chr224207109142071195-CDS,intron-Distal3.197654.24311HepG2RPS3
chr224207114142071156-CDS,intron-Distal3.6161946.08302K562YBX3
chr224207102242071028-CDS,intron-Distal4.7604525.12537K562YBX3
chr224207117442071199-CDS,intron-Distal4.2743520.14387K562YBX3
chr224207628042076287-CDS,intron-Distal3.471579.00742K562YBX3
chr224207625142076280-CDS,intron-Distal3.7463112.70113K562YBX3
chr224207096642071090-CDS,intron-Distal3.028277.49802K562METAP2
chr224207098542071034-CDS,intron-Distal3.361596.16969HepG2LARP4
chr224207102842071064-CDS,intron-Distal3.9702919.92318K562YBX3
chr224207113042071141-CDS,intron-Distal3.5728340.26709K562YBX3
chr224207118942071199-CDS,intron-Distal4.344609.14508K562PUM2
chr224207109042071170-CDS,intron-Distal3.123403.11834K562METAP2
chr224207635542076430-CDS,intron-Distal,intron-Proximal4.423114.84268K562SF3B4
chr224207106442071095-CDS,intron-Distal3.4299819.07478K562YBX3
chr224207098142071071-CDS,intron-Distal3.130355.44144HepG2RPS3
chr224207627542076346-CDS,intron-Distal3.2756526.85861K562DDX3X
chr224207110342071195-CDS,intron-Distal3.218195.23342HepG2G3BP1
chr224207624742076251-CDS,intron-Distal,intron-Proximal4.8854616.77162K562YBX3
chr224207619842076272-CDS,intron-Distal,intron-Proximal4.372967.13970HepG2PRPF8
chr224207099642071022-CDS,intron-Distal4.9653942.00983K562YBX3
chr224207116242071166-CDS,intron-Distal3.8895235.71776K562YBX3
chr224207628142076348-CDS,intron-Distal3.111006.22791HepG2LARP4
chr224207096842071029-CDS,intron-Distal3.112117.96587HepG2YBX3
chr224207627142076343-CDS,intron-Distal4.1836441.99144K562PUM2
chr224207624542076271-CDS,intron-Distal,intron-Proximal4.7436415.57236K562PUM2
chr224207094442070969-CDS,intron-Distal3.6335110.71388K562YBX3
chr224207096942070996-CDS,intron-Distal4.3261422.98397K562YBX3
chr224208479142084798-intron-Distal4.4437717.89873K562AQR
chr224208475242084791-intron-Distal5.0040324.22695K562AQR
chr224208467942084736-intron-Distal5.246656.41139HepG2EFTUD2
chr224208473542084752-intron-Distal4.961414.65563K562AQR
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for NHP2L1 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for NHP2L1 is not available on ENCORE database.

  • 100 RBPs can affect the levels of NHP2L1.  








The Knockdown/knockout RNA-Seq assay for NHP2L1 is not available on ENCORE database.





100 RBPs can affect the gene expression of NHP2L1 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
NHP2L1ENSG00000100138.92500.478703656.03780-0.548105.037204.34600HepG2AKAP1
NHP2L1ENSG00000100138.93820.240703025.092000.336602.683701.90950HepG2ASCC1
NHP2L1ENSG00000100138.9962.674101710.10580-0.8290010.317808.72680HepG2BCLAF1
NHP2L1ENSG00000100138.92063.188001140.577300.8550014.7500013.52070HepG2BOP1
NHP2L1ENSG00000100138.92308.054901889.042200.288904.889104.05260HepG2CKAP4
NHP2L1ENSG00000100138.9816.881101215.63490-0.573506.004104.51590HepG2CSTF2
NHP2L1ENSG00000100138.93328.539002632.613600.338304.999404.18220HepG2CELF1
NHP2L1ENSG00000100138.92134.765401747.545300.288604.556503.52240HepG2DDX19B
NHP2L1ENSG00000100138.91401.672801733.67940-0.306702.459001.81540HepG2DDX21
NHP2L1ENSG00000100138.91369.526201807.80260-0.400606.180205.24490HepG2DKC1
NHP2L1ENSG00000100138.91901.326602892.16750-0.605106.829405.92600HepG2EIF2S1
NHP2L1ENSG00000100138.91313.680501637.37930-0.317802.922901.81590HepG2EIF3G
NHP2L1ENSG00000100138.91984.236003196.25220-0.687807.540606.48640HepG2EIF4A3
NHP2L1ENSG00000100138.92397.981002792.61530-0.219802.301301.52610HepG2EIF4G1
NHP2L1ENSG00000100138.93002.916303652.17720-0.282404.584303.84570HepG2ETF1
NHP2L1ENSG00000100138.92640.532501846.346900.516107.239405.89260HepG2EWSR1
NHP2L1ENSG00000100138.91432.119301897.43650-0.405904.266303.30210HepG2FUBP3
NHP2L1ENSG00000100138.92349.711602991.47160-0.348402.478601.84680HepG2G3BP1
NHP2L1ENSG00000100138.92590.994103175.69100-0.293602.117601.34450HepG2G3BP2
NHP2L1ENSG00000100138.91305.524101587.42770-0.282102.040801.47590HepG2HNRNPA1
NHP2L1ENSG00000100138.91474.797301765.66750-0.259701.890001.30600HepG2HNRNPC
NHP2L1ENSG00000100138.92316.501003058.45770-0.400902.590101.62420HepG2KHSRP
NHP2L1ENSG00000100138.92141.328603225.80620-0.591206.516905.52060HepG2MAGOH
NHP2L1ENSG00000100138.92190.952203243.89370-0.566205.491504.62710HepG2MATR3
NHP2L1ENSG00000100138.91322.234601619.60380-0.292702.725801.92280HepG2MSI2
NHP2L1ENSG00000100138.92359.584903320.33240-0.492804.636703.82860HepG2NCBP2
NHP2L1ENSG00000100138.9785.902401004.40360-0.353902.417401.71620HepG2NSUN2
NHP2L1ENSG00000100138.92175.576702957.09600-0.442803.875303.03180HepG2PABPC4
NHP2L1ENSG00000100138.92670.391103043.59120-0.188702.268501.70820HepG2PCBP1
NHP2L1ENSG00000100138.91180.972601564.43500-0.405705.353004.35710HepG2PPIL4
NHP2L1ENSG00000100138.91929.410503096.92320-0.6827020.4437019.22080HepG2PTBP1
NHP2L1ENSG00000100138.93323.580002844.225200.224603.954503.27300HepG2PUM1
NHP2L1ENSG00000100138.92255.156502842.06730-0.333703.666702.89970HepG2PUM2
NHP2L1ENSG00000100138.92320.969503354.13940-0.5312010.288109.19050HepG2QKI
NHP2L1ENSG00000100138.92191.062703044.06120-0.474406.656605.65030HepG2RBM25
NHP2L1ENSG00000100138.92118.474703446.61520-0.7022022.2840021.03500HepG2NELFE
NHP2L1ENSG00000100138.92084.808803209.98640-0.6227018.0787016.73060HepG2RECQL
NHP2L1ENSG00000100138.91557.635202001.18340-0.361503.179102.32040HepG2RPS2
NHP2L1ENSG00000100138.91402.439001833.94280-0.387002.202901.48860HepG2RPS3A
NHP2L1ENSG00000100138.91113.997801476.52930-0.406502.813802.02160HepG2RRP9
NHP2L1ENSG00000100138.92449.718101782.854700.458302.430101.79950HepG2SF3A3
NHP2L1ENSG00000100138.9834.467601121.18630-0.426103.393102.61860HepG2SF3B1
NHP2L1ENSG00000100138.92421.217803224.37680-0.413308.633407.67850HepG2SF3B4
NHP2L1ENSG00000100138.94132.634103447.738500.261304.675704.07410HepG2SRFBP1
NHP2L1ENSG00000100138.92440.939603365.51860-0.4634011.4596010.63900HepG2SRSF1
NHP2L1ENSG00000100138.92338.035902738.00050-0.227803.125002.54560HepG2SRSF9
NHP2L1ENSG00000100138.92043.903702993.45540-0.5505014.7625013.76740HepG2SSB
NHP2L1ENSG00000100138.92165.730203024.96870-0.482109.144108.22030HepG2TAF15
NHP2L1ENSG00000100138.92090.991602779.63040-0.410705.371904.22000HepG2TIA1
NHP2L1ENSG00000100138.91260.180901704.53310-0.435705.539604.88050HepG2TIAL1
NHP2L1ENSG00000100138.91845.381802770.91440-0.586405.635704.41280HepG2UBE2L3
NHP2L1ENSG00000100138.91569.866201137.918200.464103.917903.01540HepG2UCHL5
NHP2L1ENSG00000100138.91150.384301581.11830-0.458808.082706.99240HepG2UPF1
NHP2L1ENSG00000100138.92348.547901526.509500.6214016.4895015.20880HepG2UTP3
NHP2L1ENSG00000100138.92004.035401738.929200.204602.692902.15160HepG2ZNF622
NHP2L1ENSG00000100138.93054.136702063.813500.5654014.9415013.73130K562AGGF1
NHP2L1ENSG00000100138.93454.130302147.498600.6856011.6987010.23010K562AKAP8L
NHP2L1ENSG00000100138.95462.124604033.216300.437405.518204.73880K562AQR
NHP2L1ENSG00000100138.92739.937102253.256400.282003.429302.40240K562ATP5C1
NHP2L1ENSG00000100138.92044.269502680.42170-0.390907.494005.88960K562BCLAF1
NHP2L1ENSG00000100138.91177.181001600.91790-0.443603.927802.88660K562BOP1
NHP2L1ENSG00000100138.91131.289101702.19630-0.589408.625707.22590K562CPSF6
NHP2L1ENSG00000100138.91434.213302033.49910-0.503707.644805.75570K562CSTF2
NHP2L1ENSG00000100138.93016.376302310.817800.384306.400804.98460K562DKC1
NHP2L1ENSG00000100138.91202.253101549.09890-0.365702.994401.59370K562DNAJC21
NHP2L1ENSG00000100138.92408.946403424.72960-0.5076010.955409.66930K562EIF2S2
NHP2L1ENSG00000100138.91777.630701409.916800.334203.590402.69090K562EIF3G
NHP2L1ENSG00000100138.92129.848301721.991500.306603.252201.82860K562EWSR1
NHP2L1ENSG00000100138.91999.656502466.40560-0.302702.864601.57370K562EXOSC5
NHP2L1ENSG00000100138.91174.656001508.37330-0.360803.593201.74930K562FASTKD2
NHP2L1ENSG00000100138.92787.185902196.141800.343703.149002.24220K562FIP1L1
NHP2L1ENSG00000100138.91518.554901953.97390-0.363702.711401.59880K562FKBP4
NHP2L1ENSG00000100138.91196.896201732.01930-0.533205.694004.45850K562FMR1
NHP2L1ENSG00000100138.9976.045601468.07510-0.588905.704204.34000K562FTO
NHP2L1ENSG00000100138.92726.513802051.547200.410207.042206.13820K562FXR1
NHP2L1ENSG00000100138.9816.343001549.70470-0.924709.913308.41580K562G3BP2
NHP2L1ENSG00000100138.91849.064802236.65350-0.274502.991701.80620K562GLRX3
NHP2L1ENSG00000100138.91268.633201625.14770-0.357303.100802.26270K562GPKOW
NHP2L1ENSG00000100138.91355.952502250.00880-0.7306012.9760011.75890K562HNRNPC
NHP2L1ENSG00000100138.91631.144302009.41960-0.300902.562401.47080K562HNRNPF
NHP2L1ENSG00000100138.92895.930001806.415200.680808.083906.35150K562HNRNPM
NHP2L1ENSG00000100138.91072.666301454.53550-0.439403.705901.98820K562KHDRBS1
NHP2L1ENSG00000100138.92833.829202279.007900.314203.020202.15600K562KIF1C
NHP2L1ENSG00000100138.91021.485701387.75450-0.442102.758001.82700K562KRR1
NHP2L1ENSG00000100138.92682.892702181.591500.298302.440301.45220K562MAK16
NHP2L1ENSG00000100138.93017.464102553.068000.241002.110001.33200K562MBNL1
NHP2L1ENSG00000100138.91923.142402351.54120-0.290104.325903.33350K562MTPAP
NHP2L1ENSG00000100138.92622.847601789.517900.551504.468003.26320K562NAA15
NHP2L1ENSG00000100138.92064.026102612.82020-0.340107.930006.75650K562NSUN2
NHP2L1ENSG00000100138.92665.607201373.487900.956505.697904.12650K562PABPN1
NHP2L1ENSG00000100138.92109.833503137.25780-0.572406.223804.97310K562PCBP3
NHP2L1ENSG00000100138.91792.774902406.38220-0.424705.256804.15320K562POLR2G
NHP2L1ENSG00000100138.93239.726202493.137900.377803.664702.70070K562PPIG
NHP2L1ENSG00000100138.92703.367801632.487900.727603.099001.52400K562PPP1R8
NHP2L1ENSG00000100138.92699.239602220.315200.281702.084601.42960K562PRPF8
NHP2L1ENSG00000100138.91637.984602017.41280-0.300602.554201.69100K562PSIP1
NHP2L1ENSG00000100138.92490.829902048.591000.281902.180901.57960K562PTBP1
NHP2L1ENSG00000100138.94520.331505243.45530-0.214102.712101.76180K562PUM2
NHP2L1ENSG00000100138.93684.957502129.678800.7909014.1212012.93670K562PUS1
NHP2L1ENSG00000100138.93015.990702075.093100.5394010.601209.46510K562RBM15
NHP2L1ENSG00000100138.92512.294801255.833901.000304.959203.19450K562SF1
NHP2L1ENSG00000100138.9914.211501545.68580-0.757608.189306.45480K562SF3B1
NHP2L1ENSG00000100138.92129.997901610.967700.402804.994403.82920K562SF3B4
NHP2L1ENSG00000100138.91207.611801586.69010-0.393903.360601.95530K562SLBP
NHP2L1ENSG00000100138.9997.706601294.67930-0.375903.432501.62660K562SND1
NHP2L1ENSG00000100138.92032.449702641.33040-0.378006.681605.29670K562SRPK2
NHP2L1ENSG00000100138.92951.552702008.450700.555305.926204.89980K562SRSF1
NHP2L1ENSG00000100138.91963.259502739.04290-0.480407.417504.96110K562SRSF9
NHP2L1ENSG00000100138.91173.803601454.33030-0.309203.403601.96140K562SSB
NHP2L1ENSG00000100138.91393.976802149.56690-0.624806.597004.97760K562SUPV3L1
NHP2L1ENSG00000100138.91212.617801614.92240-0.413303.841801.93940K562TBRG4
NHP2L1ENSG00000100138.91541.618301940.38790-0.331902.368001.50750K562TIAL1
NHP2L1ENSG00000100138.91474.259202275.14100-0.626007.678205.91510K562UCHL5
NHP2L1ENSG00000100138.92083.073402770.42490-0.411408.418007.24760K562UPF1
NHP2L1ENSG00000100138.91793.072102370.57110-0.402804.725203.56710K562WDR3
NHP2L1ENSG00000100138.93868.061104778.37430-0.304903.221601.81810K562WRN
NHP2L1ENSG00000100138.91772.858302316.87010-0.386103.301301.94330K562XRN2
NHP2L1ENSG00000100138.93202.210804543.67210-0.504807.024005.54110K562ZC3H8
NHP2L1ENSG00000100138.92029.708202566.43850-0.338503.524501.45030K562ZNF800
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for NHP2L1 is not available on ENCORE database.





10 RBPs can affect the splicing of NHP2L1 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SENHP2L1ENSG00000100138.9chr22-420783594207859142076283420763684208479742084885-0.102000.000140.00755excludedK562PRPF8
SENHP2L1ENSG00000100138.9chr22-4207835942078591420762474207636842084797420848850.112000.000070.00803includedHepG2RBM22
SENHP2L1ENSG00000100138.9chr22-4207835942078591420762474207636842084797420848850.122000.000290.03390includedHepG2SRSF7
SENHP2L1ENSG00000100138.9chr22-4207835942078591420762834207636842084797420848850.194000.000000.00011includedHepG2HNRNPA1
SENHP2L1ENSG00000100138.9chr22-4207835942078591420762474207636842084797420848850.156000.000030.00391includedHepG2FTO
SENHP2L1ENSG00000100138.9chr22-420783594207859142076247420763684208479742084885-0.126000.000000.00046excludedK562EFTUD2
SENHP2L1ENSG00000100138.9chr22-4207835942078591420762474207636842084797420848850.115000.000150.02462includedHepG2SSB
SENHP2L1ENSG00000100138.9chr22-4207835942078591420762474207636842084797420848850.203000.000000.00000includedHepG2SUPV3L1
SENHP2L1ENSG00000100138.9chr22-4207835942078591420762834207636842084797420848850.111000.001310.04797includedHepG2HNRNPC
SENHP2L1ENSG00000100138.9chr22-4207835942078591420762474207636842084797420848850.094000.001440.07918includedHepG2SRSF9
SENHP2L1ENSG00000100138.9chr22-4207835942078591420762834207636842084797420848850.141000.000010.00036includedK562HNRNPC

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for NHP2L1 is not avaliable on ENCORE database.