MBD3

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	MBD3	ENSG00000071655.17	1.83	4.50	3.17	ENCSR000AEF
HepG2	MBD3	ENSG00000071655.17	43.82	4.34	24.08	ENCSR985KAT
K562	MBD3	ENSG00000071655.17	28.77	5.18	16.98	ENCSR000AEO

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for MBD3 is not avaliable on ENCORE database.

Proteins bound to RNA

MBD3 RNA is bound by 36 proteins.

eCLIP assay for MBD3 is not avaliable on ENCORE database.

36 proteins are bound to MBD3 RNA:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr19	1577302	1577356	-	3'-UTR,intron-Distal	4.80646	3.80336	K562	DDX6
chr19	1577446	1577537	-	3'-UTR,intron-Distal	6.93269	31.21732	HepG2	UPF1
chr19	1577451	1577550	-	3'-UTR,intron-Distal	4.28596	16.98805	K562	AKAP1
chr19	1577683	1577724	-	3'-UTR,intron-Distal	5.94278	14.89968	HepG2	UPF1
chr19	1578032	1578158	-	3'-UTR,intron-Distal	7.12651	35.65601	HepG2	UPF1
chr19	1577349	1577396	-	3'-UTR,intron-Distal	4.23355	8.71030	K562	UPF1
chr19	1577656	1577713	-	3'-UTR,intron-Distal	3.13154	8.08207	K562	AKAP1
chr19	1576726	1576780	-	3'-UTR,intron-Distal	3.24924	7.47528	HepG2	AKAP1
chr19	1577253	1577282	-	3'-UTR,intron-Distal	4.43418	9.04751	K562	UPF1
chr19	1577396	1577450	-	3'-UTR,intron-Distal	4.02505	10.31199	K562	UPF1
chr19	1577110	1577151	-	3'-UTR,intron-Distal	5.57893	10.90122	K562	UPF1
chr19	1577487	1577523	-	3'-UTR,intron-Distal	3.51221	3.55142	K562	METAP2
chr19	1577885	1577924	-	3'-UTR,intron-Distal,intron-Proximal	3.59606	6.11078	K562	AKAP1
chr19	1577626	1577707	-	3'-UTR,intron-Distal	3.71119	3.84718	K562	METAP2
chr19	1578099	1578191	-	3'-UTR,intron-Distal	3.18455	4.23709	HepG2	AQR
chr19	1577681	1577747	-	3'-UTR,intron-Distal	3.93773	11.93176	HepG2	AKAP1
chr19	1576708	1576791	-	3'-UTR,intron-Distal	5.56687	20.09068	K562	UPF1
chr19	1577338	1577408	-	3'-UTR,intron-Distal	6.14497	20.04501	HepG2	UPF1
chr19	1577785	1577840	-	3'-UTR,intron-Distal	4.77426	11.02367	HepG2	UPF1
chr19	1578333	1578393	-	3'-UTR,CDS,intron-Distal,intron-Proximal	4.96362	14.07248	K562	UPF1
chr19	1577838	1577942	-	3'-UTR,intron-Distal,intron-Proximal	4.13735	13.01471	HepG2	AKAP1
chr19	1576725	1576780	-	3'-UTR,intron-Distal	5.80201	14.82289	HepG2	UPF1
chr19	1576962	1577060	-	3'-UTR,intron-Distal	4.38912	13.90591	K562	UPF1
chr19	1578046	1578095	-	3'-UTR,intron-Distal	4.14669	5.48330	K562	UPF1
chr19	1577840	1577940	-	3'-UTR,intron-Distal,intron-Proximal	6.84070	28.59572	HepG2	UPF1
chr19	1577515	1577559	-	3'-UTR,intron-Distal	3.33600	3.50122	K562	DDX55
chr19	1576700	1576827	-	3'-UTR,intron-Distal	4.73950	12.87873	K562	PABPC4
chr19	1578023	1578157	-	3'-UTR,intron-Distal	6.07318	18.88316	HepG2	AKAP1
chr19	1577632	1577699	-	3'-UTR,intron-Distal	4.27322	5.85562	K562	GEMIN5
chr19	1577795	1577864	-	3'-UTR,intron-Distal	4.73559	12.61031	K562	AKAP1
chr19	1577040	1577100	-	3'-UTR,intron-Distal	5.88317	16.47494	HepG2	AKAP1
chr19	1578095	1578156	-	3'-UTR,intron-Distal	4.84023	12.67045	K562	UPF1
chr19	1577222	1577293	-	3'-UTR,intron-Distal	6.39834	20.84685	HepG2	UPF1
chr19	1577518	1577571	-	3'-UTR,intron-Distal	3.69885	8.27984	K562	UPF1
chr19	1578287	1578322	-	3'-UTR,intron-Distal,intron-Proximal	3.86499	6.65114	HepG2	PRPF8
chr19	1577433	1577541	-	3'-UTR,intron-Distal	3.84998	13.59573	HepG2	AKAP1
chr19	1577100	1577201	-	3'-UTR,intron-Distal	5.23694	18.26928	HepG2	AKAP1
chr19	1577013	1577072	-	3'-UTR,intron-Distal	5.85449	12.32677	HepG2	UPF1
chr19	1576951	1576990	-	3'-UTR,intron-Distal	5.47222	10.75082	HepG2	UPF1
chr19	1578332	1578347	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.92185	6.75470	HepG2	UPF1
chr19	1577471	1577518	-	3'-UTR,intron-Distal	3.52916	7.59462	K562	UPF1
chr19	1577124	1577190	-	3'-UTR,intron-Distal	4.62977	16.14270	HepG2	UPF1
chr19	1577339	1577433	-	3'-UTR,intron-Distal	6.09037	16.74558	HepG2	AKAP1
chr19	1577588	1577662	-	3'-UTR,intron-Distal	5.16389	13.72135	K562	UPF1
chr19	1577784	1577838	-	3'-UTR,intron-Distal	5.24695	9.44144	HepG2	AKAP1
chr19	1576729	1576759	-	3'-UTR,intron-Distal	4.21119	3.35417	K562	METAP2
chr19	1577609	1577681	-	3'-UTR,intron-Distal	3.97283	12.96880	HepG2	AKAP1
chr19	1577615	1577683	-	3'-UTR,intron-Distal	5.54610	21.20565	HepG2	UPF1
chr19	1577164	1577202	-	3'-UTR,intron-Distal	3.64503	6.04024	K562	UPF1
chr19	1592629	1592684	-	5'-UTR,CDS,intron-Distal,intron-Proximal	3.33279	10.54269	HepG2	CSTF2T
chr19	1585218	1585275	-	5'-UTR,intron-Distal,intron-Proximal	3.07412	3.83168	HepG2	GTF2F1
chr19	1585299	1585401	-	5'-UTR,intron-Distal,intron-Proximal	3.79677	6.00014	K562	CSTF2T
chr19	1585202	1585275	-	3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal	3.14451	3.41957	K562	DROSHA
chr19	1592703	1592811	-	5'-UTR,intron-Distal,intron-Proximal	3.82325	9.39605	HepG2	PRPF4
chr19	1585450	1585519	-	5'-UTR,intron-Distal	3.65931	12.41577	HepG2	FAM120A
chr19	1592626	1592699	-	5'-UTR,CDS,intron-Distal,intron-Proximal	3.42183	23.47850	HepG2	DDX3X
chr19	1592625	1592677	-	5'-UTR,CDS,intron-Distal,intron-Proximal	3.82208	5.81451	K562	CSTF2T
chr19	1585210	1585330	-	3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal	3.05496	3.32582	HepG2	FKBP4
chr19	1585289	1585354	-	5'-UTR,intron-Distal,intron-Proximal	4.37076	5.79396	K562	DDX24
chr19	1585179	1585260	-	3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal	4.23681	7.96024	HepG2	AQR
chr19	1592628	1592727	-	5'-UTR,CDS,intron-Distal,intron-Proximal	3.65314	10.45443	HepG2	AKAP1
chr19	1585459	1585558	-	5'-UTR,intron-Distal,intron-Proximal	4.70422	11.90236	HepG2	PRPF4
chr19	1585167	1585217	-	3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal	3.52111	11.51707	K562	UPF1
chr19	1592714	1592791	-	5'-UTR,intron-Distal,intron-Proximal	4.02777	8.99095	K562	GTF2F1
chr19	1592683	1592761	-	5'-UTR,intron-Distal,intron-Proximal	4.77820	23.17057	HepG2	UPF1
chr19	1592731	1592772	-	5'-UTR,intron-Distal,intron-Proximal	4.13961	3.43867	K562	CSTF2T
chr19	1592629	1592679	-	5'-UTR,CDS,intron-Distal,intron-Proximal	3.11102	5.19341	K562	FAM120A
chr19	1592625	1592703	-	5'-UTR,CDS,intron-Distal,intron-Proximal	3.07019	5.17878	HepG2	PRPF4
chr19	1585336	1585417	-	5'-UTR,intron-Distal	5.10907	10.08328	HepG2	PRPF4
chr19	1592627	1592683	-	5'-UTR,CDS,intron-Distal,intron-Proximal	5.07095	26.73444	HepG2	UPF1
chr19	1585263	1585397	-	5'-UTR,intron-Distal,intron-Proximal	3.18486	4.38865	HepG2	RBFOX2
chr19	1585222	1585339	-	5'-UTR,intron-Distal,intron-Proximal	3.30799	6.90689	K562	GEMIN5
chr19	1592568	1592743	-	5'-UTR,CDS,intron-Distal,intron-Proximal	3.27798	7.40550	K562	FUS
chr19	1592715	1592850	-	5'-UTR,intron-Distal,intron-Proximal	3.26443	6.94422	HepG2	NCBP2
chr19	1592731	1592774	-	5'-UTR,intron-Distal,intron-Proximal	3.30264	5.14779	HepG2	FAM120A
chr19	1592733	1592836	-	5'-UTR,intron-Distal,intron-Proximal	4.48221	17.09797	HepG2	CSTF2T
chr19	1592566	1592635	-	5'-UTR,CDS,intron-Distal	5.04429	6.90190	HepG2	AQR
chr19	1592626	1592692	-	5'-UTR,CDS,intron-Distal,intron-Proximal	4.22997	7.82744	K562	AKAP1
chr19	1585317	1585443	-	5'-UTR,intron-Distal	3.91845	4.11145	K562	FUS
chr19	1585446	1585556	-	5'-UTR,intron-Distal,intron-Proximal	3.04118	8.29148	K562	GTF2F1
chr19	1585289	1585389	-	5'-UTR,intron-Distal,intron-Proximal	3.78518	11.96269	HepG2	FAM120A
chr19	1585204	1585273	-	3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal	3.30103	4.08069	HepG2	XRN2
chr19	1592542	1592678	-	5'-UTR,CDS,intron-Distal,intron-Proximal	4.71489	7.25651	K562	FTO
chr19	1592598	1592682	-	5'-UTR,CDS,intron-Distal,intron-Proximal	3.67339	7.10368	K562	GEMIN5
chr19	1585132	1585202	-	3'-UTR,5'-UTR,CDS,intron-Distal	3.86834	7.87703	HepG2	UPF1
chr19	1585452	1585535	-	5'-UTR,intron-Distal,intron-Proximal	5.29133	8.09947	K562	NONO
chr19	1592752	1592819	-	5'-UTR,intron-Distal,intron-Proximal	3.17245	3.33411	HepG2	GTF2F1
chr19	1592554	1592747	-	5'-UTR,CDS,intron-Distal,intron-Proximal	6.35109	37.35228	K562	UPF1
chr19	1585274	1585336	-	5'-UTR,intron-Distal,intron-Proximal	3.13793	7.48310	HepG2	PRPF4
chr19	1585203	1585372	-	3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal	4.51519	22.04028	HepG2	CSTF2T
chr19	1592559	1592679	-	5'-UTR,CDS,intron-Distal,intron-Proximal	3.51306	4.22563	K562	UCHL5
chr19	1585467	1585549	-	5'-UTR,intron-Distal,intron-Proximal	3.17348	6.16114	K562	EWSR1
chr19	1585099	1585167	-	3'-UTR,5'-UTR,CDS,intron-Distal	3.82975	13.61988	K562	UPF1
chr19	1585119	1585192	-	3'-UTR,5'-UTR,CDS,intron-Distal	4.19238	5.99316	K562	AKAP1
chr19	1585458	1585534	-	5'-UTR,intron-Distal,intron-Proximal	4.99673	8.31268	K562	CSTF2T
chr19	1592725	1592833	-	5'-UTR,intron-Distal,intron-Proximal	3.72531	15.68212	HepG2	DDX3X
chr19	1585221	1585274	-	5'-UTR,intron-Distal,intron-Proximal	3.74216	3.22046	K562	AKAP8L
chr19	1585340	1585421	-	5'-UTR,intron-Distal	4.10261	6.63735	K562	GTF2F1
chr19	1592541	1592624	-	CDS,intron-Distal	3.13751	4.05816	K562	EWSR1
chr19	1592548	1592629	-	CDS,intron-Distal	4.32463	19.63618	HepG2	CSTF2T
chr19	1584539	1584623	-	3'-UTR,CDS,intron-Distal,intron-Proximal	4.06248	8.40792	HepG2	PPIG
chr19	1592533	1592583	-	CDS,intron-Distal	3.18741	4.37235	HepG2	NKRF
chr19	1584574	1584652	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.21861	4.06711	K562	AKAP1
chr19	1585010	1585085	-	3'-UTR,CDS,intron-Distal,intron-Proximal	4.68599	13.47152	HepG2	PRPF8
chr19	1592538	1592625	-	CDS,intron-Distal	5.42673	12.33690	K562	CSTF2T
chr19	1578483	1578589	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.37757	5.70176	HepG2	AQR
chr19	1592576	1592626	-	CDS,intron-Distal	4.20999	15.56330	HepG2	DDX3X
chr19	1592559	1592619	-	CDS,intron-Distal	3.11824	6.40026	K562	GTF2F1
chr19	1592401	1592525	-	CDS,intron-Distal,intron-Proximal	4.14347	4.37227	K562	FUS
chr19	1581202	1581268	-	3'-UTR,CDS,intron-Distal	3.63571	6.70631	K562	AKAP1
chr19	1582618	1582658	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.84438	4.40370	K562	AKAP1
chr19	1581250	1581268	-	3'-UTR,CDS,intron-Distal	4.28058	4.25109	HepG2	AKAP1
chr19	1581219	1581259	-	3'-UTR,CDS,intron-Distal	3.38768	4.45619	HepG2	UPF1
chr19	1578433	1578509	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.18292	7.35254	HepG2	UPF1
chr19	1592430	1592524	-	CDS,intron-Distal,intron-Proximal	4.79451	6.11596	HepG2	PRPF4
chr19	1578435	1578492	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.21489	6.73008	HepG2	AKAP1
chr19	1582526	1582638	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.37420	10.07874	HepG2	PRPF8
chr19	1578393	1578480	-	3'-UTR,CDS,intron-Distal,intron-Proximal	4.49191	6.81876	K562	UPF1
chr19	1592566	1592610	-	CDS,intron-Distal	3.40644	3.92899	HepG2	PRPF4
chr19	1581239	1581333	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.62118	6.57821	HepG2	AQR
chr19	1581220	1581306	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.59751	7.02925	K562	AQR
chr19	1582620	1582664	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.37614	3.73678	HepG2	UPF1
chr19	1592041	1592125	-	intron-Distal	5.38688	5.41525	HepG2	PCBP2
chr19	1592154	1592222	-	intron-Distal	3.21667	5.92687	HepG2	FAM120A
chr19	1592341	1592392	-	intron-Distal,intron-Proximal	3.47683	3.62890	K562	FAM120A
chr19	1592012	1592113	-	intron-Distal	5.72246	15.60039	K562	CSTF2T
chr19	1591293	1591366	-	intron-Distal	3.68906	4.29698	HepG2	SFPQ
chr19	1592144	1592201	-	intron-Distal	4.53337	9.51301	K562	GTF2F1
chr19	1585896	1585967	-	intron-Distal	3.41412	4.88713	HepG2	CSTF2T
chr19	1592059	1592154	-	intron-Distal	3.04456	11.94409	HepG2	CSTF2T
chr19	1587532	1587579	-	intron-Distal	3.72443	4.24288	K562	UPF1
chr19	1592025	1592127	-	intron-Distal	3.73952	11.21688	HepG2	GTF2F1
chr19	1592123	1592185	-	intron-Distal	3.65835	9.55893	HepG2	XPO5
chr19	1585706	1585751	-	intron-Distal	3.66073	5.85821	K562	NONO
chr19	1578557	1578588	-	intron-Distal,intron-Proximal	4.17200	3.25678	HepG2	SF3B4
chr19	1592015	1592062	-	intron-Distal	4.10535	8.62305	K562	NONO
chr19	1582578	1582597	-	intron-Distal,intron-Proximal	4.84123	5.68078	HepG2	AQR
chr19	1591484	1591529	-	intron-Distal	3.45717	7.34646	K562	NONO
chr19	1586080	1586136	-	intron-Distal	3.37215	3.55142	K562	METAP2
chr19	1586016	1586061	-	intron-Distal	4.48241	5.02084	HepG2	HNRNPM
chr19	1592342	1592378	-	intron-Distal,intron-Proximal	3.17041	3.36616	K562	NONO
chr19	1591073	1591172	-	intron-Distal	3.70606	7.88956	K562	CSTF2T
chr19	1592482	1592510	-	intron-Distal,intron-Proximal	3.27747	4.09779	K562	NONO
chr19	1592443	1592506	-	intron-Distal,intron-Proximal	3.11052	6.68884	HepG2	CSTF2T
chr19	1592428	1592446	-	intron-Distal,intron-Proximal	4.48783	3.37054	HepG2	XPO5
chr19	1582532	1582574	-	intron-Distal,intron-Proximal	3.48134	5.34337	K562	AQR
chr19	1585913	1586016	-	intron-Distal	3.66846	3.93303	HepG2	HNRNPM
chr19	1592021	1592066	-	intron-Distal	4.49474	5.83275	HepG2	PRPF4
chr19	1587895	1587959	-	intron-Distal	4.21512	4.75225	K562	ILF3
chr19	1592168	1592220	-	intron-Distal	4.29441	9.13550	HepG2	GTF2F1
chr19	1592257	1592288	-	intron-Distal	3.71825	4.84557	HepG2	CSTF2T
chr19	1588179	1588244	-	intron-Distal	4.07876	4.55095	K562	YBX3
chr19	1591443	1591484	-	intron-Distal	3.50811	6.54247	K562	NONO
chr19	1592066	1592148	-	intron-Distal	4.15795	14.43896	HepG2	PRPF4
chr19	1592009	1592059	-	intron-Distal	3.27314	6.99714	HepG2	CSTF2T
chr19	1592029	1592136	-	intron-Distal	4.44486	13.58209	K562	GTF2F1
chr19	1591305	1591391	-	intron-Distal	3.71556	10.84546	K562	NONO
chr19	1585998	1586044	-	intron-Distal	4.01618	7.57827	K562	NONO
chr19	1591135	1591170	-	intron-Distal	3.41385	3.66308	K562	UPF1
chr19	1590423	1590452	-	intron-Distal	3.67114	4.50550	K562	UPF1
chr19	1585914	1585966	-	intron-Distal	3.74461	5.37486	K562	NONO
chr19	1592057	1592115	-	intron-Distal	3.55496	3.78913	HepG2	FKBP4
chr19	1586564	1586573	-	intron-Distal	4.20995	4.78556	K562	LIN28B
chr19	1592354	1592393	-	intron-Distal,intron-Proximal	3.70754	5.08839	HepG2	CSTF2T
chr19	1586314	1586378	-	intron-Distal,intron-Proximal	3.53633	5.17701	K562	NONO
chr19	1592159	1592222	-	intron-Distal	3.74192	9.98522	HepG2	PRPF4
chr19	1587643	1587706	-	intron-Distal	3.34921	4.96603	K562	UPF1
chr19	1591273	1591372	-	intron-Distal	4.44735	10.30731	K562	CSTF2T
chr19	1592344	1592407	-	intron-Distal,intron-Proximal	4.76273	12.90692	HepG2	XPO5
chr19	1586521	1586564	-	intron-Distal	4.55163	5.66624	K562	LIN28B
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

eCLIP assay for MBD3 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for MBD3 is not available on ENCORE database.
104 RBPs can affect the levels of MBD3.

The Knockdown/knockout RNA-Seq assay for MBD3 is not available on ENCORE database.

104 RBPs can affect the gene expression of MBD3 :

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
MBD3	ENSG00000071655.13	144.91640	328.75430	-1.18180	2.53400	1.50580	HepG2	AATF
MBD3	ENSG00000071655.13	878.29260	438.94570	1.00060	3.71940	3.03630	HepG2	BOP1
MBD3	ENSG00000071655.13	179.05290	361.92770	-1.01530	8.98970	7.71530	HepG2	CALR
MBD3	ENSG00000071655.13	416.64660	211.33650	0.97920	2.45980	1.74290	HepG2	CNOT7
MBD3	ENSG00000071655.13	324.35850	152.47970	1.08890	5.97840	4.48350	HepG2	YBX3
MBD3	ENSG00000071655.13	469.73670	306.00970	0.61820	5.93940	5.06470	HepG2	CELF1
MBD3	ENSG00000071655.13	513.07960	328.98450	0.64110	7.43480	6.30410	HepG2	DAZAP1
MBD3	ENSG00000071655.13	1228.90200	1007.96750	0.28580	3.35780	2.44930	HepG2	DDX19B
MBD3	ENSG00000071655.13	310.42980	149.73160	1.05180	9.78710	8.52990	HepG2	DNAJC21
MBD3	ENSG00000071655.13	416.71640	148.39790	1.48950	7.98760	6.95100	HepG2	DNAJC2
MBD3	ENSG00000071655.13	135.56420	333.81380	-1.30010	2.70180	1.60980	HepG2	AGO1
MBD3	ENSG00000071655.13	509.56530	310.94520	0.71250	6.01270	4.83550	HepG2	EIF4G2
MBD3	ENSG00000071655.13	500.30930	286.44840	0.80440	3.07960	1.83460	HepG2	FAM120A
MBD3	ENSG00000071655.13	367.09760	763.68210	-1.05680	15.14720	13.37530	HepG2	FUBP3
MBD3	ENSG00000071655.13	486.28760	179.18090	1.44030	7.24700	4.95340	HepG2	HNRNPA0
MBD3	ENSG00000071655.13	375.39470	174.92300	1.10160	4.08330	2.37300	HepG2	HNRNPAB
MBD3	ENSG00000071655.13	690.10060	426.66800	0.69360	9.35740	8.13410	HepG2	HNRNPF
MBD3	ENSG00000071655.13	746.82700	299.66430	1.31730	24.14660	22.36370	HepG2	HNRNPL
MBD3	ENSG00000071655.13	480.09570	167.02900	1.52310	6.89790	5.97870	HepG2	HNRNPU
MBD3	ENSG00000071655.13	695.06780	420.14600	0.72620	5.38410	4.40730	HepG2	IGF2BP1
MBD3	ENSG00000071655.13	304.11660	170.61520	0.83380	7.47180	6.33030	HepG2	ILF2
MBD3	ENSG00000071655.13	480.89410	201.85100	1.25230	4.85020	3.21620	HepG2	KHDRBS1
MBD3	ENSG00000071655.13	1190.50050	665.22480	0.83960	2.24070	1.50070	HepG2	LARP4
MBD3	ENSG00000071655.13	1784.25900	811.02040	1.13740	5.54120	4.62280	HepG2	MAGOH
MBD3	ENSG00000071655.13	1520.83860	815.39550	0.89920	3.31730	2.63230	HepG2	MATR3
MBD3	ENSG00000071655.13	445.08910	200.70190	1.14890	2.81520	1.38470	HepG2	NIP7
MBD3	ENSG00000071655.13	891.43330	326.22310	1.45020	13.83430	12.18730	HepG2	NOL12
MBD3	ENSG00000071655.13	363.02410	144.14490	1.33240	5.96870	3.88620	HepG2	NOLC1
MBD3	ENSG00000071655.13	858.87970	344.97260	1.31590	5.02430	3.52780	HepG2	NONO
MBD3	ENSG00000071655.13	1098.73390	799.90260	0.45780	5.34080	4.54220	HepG2	PCBP1
MBD3	ENSG00000071655.13	476.13510	148.97720	1.67620	26.28840	24.19210	HepG2	PPIL4
MBD3	ENSG00000071655.13	360.91930	547.13820	-0.60020	2.14160	1.45340	HepG2	PRPF4
MBD3	ENSG00000071655.13	999.28930	813.99040	0.29580	2.00900	1.52950	HepG2	PTBP1
MBD3	ENSG00000071655.13	836.30750	311.42260	1.42510	27.06340	25.45910	HepG2	PUF60
MBD3	ENSG00000071655.13	997.55100	330.60540	1.59320	57.52810	55.55680	HepG2	PUM1
MBD3	ENSG00000071655.13	844.54600	267.77370	1.65710	8.67260	6.90990	HepG2	RBM27
MBD3	ENSG00000071655.13	707.14630	217.44820	1.70120	3.38110	2.20900	HepG2	RCC2
MBD3	ENSG00000071655.13	1205.57620	905.84370	0.41230	5.27180	4.56360	HepG2	NELFE
MBD3	ENSG00000071655.13	769.25780	246.88250	1.63950	8.06890	6.74830	HepG2	RPS2
MBD3	ENSG00000071655.13	659.27630	212.67200	1.63220	12.74860	11.08870	HepG2	RPS3A
MBD3	ENSG00000071655.13	383.47260	148.74890	1.36610	4.09750	3.34030	HepG2	SAFB2
MBD3	ENSG00000071655.13	550.00830	200.25500	1.45750	7.05400	5.01100	HepG2	SART3
MBD3	ENSG00000071655.13	1338.82520	929.54640	0.52630	2.56370	1.91440	HepG2	SF3A3
MBD3	ENSG00000071655.13	1160.91280	847.36220	0.45410	5.86100	5.05440	HepG2	SF3B4
MBD3	ENSG00000071655.13	793.78210	298.63970	1.41020	37.91880	35.95800	HepG2	SLBP
MBD3	ENSG00000071655.13	348.83540	173.47020	1.00780	10.80010	9.66310	HepG2	SMN1
MBD3	ENSG00000071655.13	700.38290	269.70270	1.37670	3.74900	2.62090	HepG2	SMNDC1
MBD3	ENSG00000071655.13	182.11770	479.87470	-1.39780	2.11880	1.43810	HepG2	SNRNP70
MBD3	ENSG00000071655.13	437.38360	884.50630	-1.01600	16.67190	15.71830	HepG2	SRSF1
MBD3	ENSG00000071655.13	958.82170	307.50430	1.64060	50.42690	48.23430	HepG2	SRSF5
MBD3	ENSG00000071655.13	611.17710	419.18790	0.54390	5.79300	4.84640	HepG2	SRSF7
MBD3	ENSG00000071655.13	394.44300	719.63060	-0.86740	9.81970	8.89000	HepG2	SRSF9
MBD3	ENSG00000071655.13	1575.88020	1226.70790	0.36130	2.45130	1.96290	HepG2	SSB
MBD3	ENSG00000071655.13	459.12350	185.15810	1.31000	5.01150	3.48200	HepG2	STIP1
MBD3	ENSG00000071655.13	894.86180	349.70020	1.35540	34.80460	33.02560	HepG2	SUCLG1
MBD3	ENSG00000071655.13	177.11070	795.14980	-2.16660	40.42090	38.60800	HepG2	TAF15
MBD3	ENSG00000071655.13	402.63360	730.50590	-0.85940	3.47980	2.54620	HepG2	TIA1
MBD3	ENSG00000071655.13	318.09390	162.31410	0.97060	1.87780	1.44850	HepG2	TIAL1
MBD3	ENSG00000071655.13	594.88760	163.74980	1.86100	15.83270	14.63770	HepG2	TRIM56
MBD3	ENSG00000071655.13	965.50730	304.27380	1.66580	6.67680	5.22960	HepG2	TUFM
MBD3	ENSG00000071655.13	938.57600	322.08670	1.54290	19.39400	17.19740	HepG2	UBE2L3
MBD3	ENSG00000071655.13	611.28920	190.51630	1.68180	14.31990	11.90190	HepG2	XPO5
MBD3	ENSG00000071655.13	793.28720	367.54820	1.10980	3.10850	2.34140	HepG2	XRN2
MBD3	ENSG00000071655.13	724.26350	906.64310	-0.32400	2.38760	1.86840	HepG2	ZNF622
MBD3	ENSG00000071655.13	893.60130	415.60000	1.10430	3.35730	1.88240	K562	BCCIP
MBD3	ENSG00000071655.13	975.53760	401.78130	1.27970	4.98950	3.68400	K562	BCLAF1
MBD3	ENSG00000071655.13	631.75130	427.69010	0.56270	4.70220	3.24770	K562	CCAR1
MBD3	ENSG00000071655.13	1085.62850	852.65290	0.34840	3.04990	1.80370	K562	CCDC124
MBD3	ENSG00000071655.13	1230.99790	982.48440	0.32520	3.30240	2.08690	K562	CPEB4
MBD3	ENSG00000071655.13	839.32730	304.81140	1.46120	2.44490	1.46050	K562	CSTF2
MBD3	ENSG00000071655.13	743.58390	352.02920	1.07870	3.51300	2.00470	K562	DDX27
MBD3	ENSG00000071655.13	1575.43710	1016.82050	0.63160	12.68850	11.40120	K562	DDX47
MBD3	ENSG00000071655.13	808.13120	382.62540	1.07860	5.50110	4.18720	K562	EFTUD2
MBD3	ENSG00000071655.13	1665.26760	1073.42890	0.63340	12.08180	10.73370	K562	EIF2S2
MBD3	ENSG00000071655.13	727.62340	409.37290	0.82970	2.99650	1.91690	K562	EIF3D
MBD3	ENSG00000071655.13	413.49320	194.01480	1.09160	11.78900	10.12720	K562	EIF3G
MBD3	ENSG00000071655.13	798.17050	625.73280	0.35110	2.99010	1.77540	K562	EIF4B
MBD3	ENSG00000071655.13	2074.41420	1498.31740	0.46930	2.15410	1.32000	K562	EIF4G2
MBD3	ENSG00000071655.13	921.29400	594.86620	0.63100	6.57400	5.22640	K562	FIP1L1
MBD3	ENSG00000071655.13	98.75940	171.52140	-0.79640	4.23880	2.53770	K562	FUS
MBD3	ENSG00000071655.13	1141.94820	722.61180	0.66010	2.74720	2.14350	K562	FXR1
MBD3	ENSG00000071655.13	16.68400	67.76570	-2.02210	6.08330	4.94700	K562	G3BP2
MBD3	ENSG00000071655.13	2308.52600	1430.34720	0.69050	3.23510	2.41990	K562	GRSF1
MBD3	ENSG00000071655.13	1934.36680	1325.93200	0.54480	2.16820	1.37820	K562	HNRNPU
MBD3	ENSG00000071655.13	560.64910	271.70330	1.04500	2.18120	1.30120	K562	IGF2BP2
MBD3	ENSG00000071655.13	455.52390	276.23500	0.72150	3.41160	2.05110	K562	IGF2BP3
MBD3	ENSG00000071655.13	312.74200	488.61860	-0.64370	2.81500	1.38200	K562	ILF2
MBD3	ENSG00000071655.13	543.53320	787.88520	-0.53560	5.15680	3.96010	K562	KIF1C
MBD3	ENSG00000071655.13	131.80800	259.07850	-0.97500	5.04610	3.73910	K562	KRR1
MBD3	ENSG00000071655.13	838.17870	285.24260	1.55500	32.16980	29.09570	K562	MAGOH
MBD3	ENSG00000071655.13	589.16640	284.61720	1.04960	3.24600	2.23870	K562	MATR3
MBD3	ENSG00000071655.13	300.54820	618.65950	-1.04150	8.64340	6.73730	K562	NAA15
MBD3	ENSG00000071655.13	388.20490	693.87470	-0.83790	10.61210	8.25930	K562	NCBP2
MBD3	ENSG00000071655.13	886.17080	377.75190	1.23000	3.67100	2.13730	K562	NONO
MBD3	ENSG00000071655.13	1089.28900	675.35870	0.68960	8.03010	6.46720	K562	PPIG
MBD3	ENSG00000071655.13	804.78750	372.34630	1.11190	2.94420	2.17230	K562	PRPF8
MBD3	ENSG00000071655.13	921.14290	277.15400	1.73260	43.14120	40.65910	K562	PTBP1
MBD3	ENSG00000071655.13	1201.29350	1739.39400	-0.53400	3.10900	1.97630	K562	PUM1
MBD3	ENSG00000071655.13	425.11220	736.27220	-0.79240	7.77170	6.90820	K562	PUS1
MBD3	ENSG00000071655.13	532.53010	717.38220	-0.42990	3.60410	2.94100	K562	RBM15
MBD3	ENSG00000071655.13	741.38210	265.58990	1.48090	8.62050	7.01340	K562	RBM22
MBD3	ENSG00000071655.13	613.43350	259.02780	1.24370	3.14230	1.63090	K562	RBM34
MBD3	ENSG00000071655.13	751.03530	379.05680	0.98640	2.42180	1.65990	K562	RPS19
MBD3	ENSG00000071655.13	385.48480	129.14710	1.57760	10.54660	8.45700	K562	RPS3
MBD3	ENSG00000071655.13	940.82110	1186.56530	-0.33480	2.08400	1.36980	K562	SF3A3
MBD3	ENSG00000071655.13	222.76670	70.50720	1.65960	15.40020	13.26090	K562	SF3B4
MBD3	ENSG00000071655.13	590.20540	271.73780	1.11890	7.88300	6.69880	K562	SRSF1
MBD3	ENSG00000071655.13	346.35820	124.65020	1.47430	13.68860	11.20950	K562	SRSF4
MBD3	ENSG00000071655.13	509.06580	256.72110	0.98760	9.48450	7.40910	K562	SRSF5
MBD3	ENSG00000071655.13	114.22490	200.12710	-0.80900	4.33030	2.67870	K562	SSB
MBD3	ENSG00000071655.13	504.32620	780.43270	-0.62990	3.82060	2.20180	K562	SSRP1
MBD3	ENSG00000071655.13	516.50620	713.76210	-0.46670	3.03200	1.71380	K562	STAU1
MBD3	ENSG00000071655.13	721.13240	360.11870	1.00170	3.14850	2.06310	K562	SUPV3L1
MBD3	ENSG00000071655.13	927.55120	274.94210	1.75420	19.70870	17.48560	K562	TARDBP
MBD3	ENSG00000071655.13	761.84050	265.23220	1.52210	29.78310	26.87450	K562	TIA1
MBD3	ENSG00000071655.13	475.44760	260.44740	0.86820	7.96500	5.85600	K562	TRA2A
MBD3	ENSG00000071655.13	887.78320	1090.93850	-0.29730	2.17650	1.40120	K562	WDR3
MBD3	ENSG00000071655.13	816.38360	388.61880	1.07080	3.97880	2.42370	K562	XRN2
MBD3	ENSG00000071655.13	197.35300	576.38940	-1.54630	3.23670	1.47850	K562	YTHDC2
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for MBD3 is not available on ENCORE database.

4 RBPs can affect the splicing of MBD3 :

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	2ndExonStart	2ndExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
SE	MBD3	ENSG00000071655.13	chr19	-	1583251	1583379			1582620	1582711	1584538	1584572	0.35100	0.00000	0.00000	included	K562	HNRNPC
A3SS	MBD3	ENSG00000071655.13	chr19	-	1581157	1581388			1581157	1581268	1582620	1582795	0.09900	0.00000	0.00000	longer	K562	AQR
A3SS	MBD3	ENSG00000071655.13	chr19	-	1582596	1582795			1582596	1582711	1584538	1584704	0.05400	0.00001	0.00008	longer	K562	AQR
MXE	MBD3	ENSG00000071655.13	chr19	-	1581090	1581268	1582620	1582711	1576677	1578537	1584538	1584676	0.16400	0.00094	0.01746	1included	K562	DROSHA
MXE	MBD3	ENSG00000071655.13	chr19	-	1581090	1581268	1582620	1582711	1576677	1578537	1584538	1584676	0.11600	0.00603	0.07043	1included	K562	HNRNPUL1

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

MBD3

General Information

Functions

Localization

Domains (AlphaFold: MBD3)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for MBD3 is not avaliable on ENCORE database.

36 proteins are bound to MBD3 RNA:

eCLIP assay for MBD3 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for MBD3 is not available on ENCORE database.

104 RBPs can affect the gene expression of MBD3 :

The Knockdown/knockout RNA-Seq assay for MBD3 is not available on ENCORE database.

4 RBPs can affect the splicing of MBD3 :

The Knockdown/knockout RNA-Seq assay for MBD3 is not avaliable on ENCORE database.