HBA1

General Information

Gene Name       : HBA1
Gene ID             : ENSG00000206172.8
Essential Gene : No

Functions

Localization

Domains (AlphaFold: HBA1)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878HBA1ENSG00000206172.80.000.050.03ENCSR000AEF
HepG2HBA1ENSG00000206172.82.890.221.56ENCSR985KAT
K562HBA1ENSG00000206172.81293.17255.70774.44ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for HBA1 is not avaliable on ENCORE database.



Proteins bound to RNA
  • HBA1 RNA is bound by 9 proteins.  







eCLIP assay for HBA1 is not avaliable on ENCORE database.





9 proteins are bound to HBA1 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr16227469227473+3'-UTR4.48114400.00000K562PABPC4
chr16227488227509+3'-UTR3.47458400.00000K562TIA1
chr16227433227442+3'-UTR3.84822400.00000K562PABPC4
chr16227452227498+3'-UTR5.49401400.00000K562PCBP1
chr16227417227433+3'-UTR4.28122400.00000K562PABPC4
chr16227441227447+3'-UTR5.32753400.00000K562PCBP1
chr16227404227439+3'-UTR,CDS5.28177400.00000K562PCBP1
chr16227452227460+3'-UTR4.21726400.00000K562PABPC4
chr16227403227417+3'-UTR,CDS4.42965400.00000K562PABPC4
chr16227458227517+3'-UTR3.09901400.00000K562APOBEC3C
chr16227447227452+3'-UTR5.40288400.00000K562PCBP1
chr16227431227441+3'-UTR3.70489400.00000K562LARP4
chr16227406227431+3'-UTR,CDS4.1049470.35226K562LARP4
chr16227510227519+3'-UTR5.35002400.00000K562PABPC4
chr16227473227480+3'-UTR4.88782400.00000K562PABPC4
chr16227439227441+3'-UTR5.32946400.00000K562PCBP1
chr16227441227519+3'-UTR3.69771400.00000K562LARP4
chr16227460227469+3'-UTR4.33165400.00000K562PABPC4
chr16227442227446+3'-UTR3.93444400.00000K562PABPC4
chr16227396227429+3'-UTR,CDS4.42523400.00000K562RPS3
chr16227446227452+3'-UTR4.03708400.00000K562PABPC4
chr16227137227216+intron-Proximal3.015954.04646K562PRPF8
chr16227216227282+intron-Proximal5.5242418.05428K562SF3B4
chr16227209227273+intron-Proximal3.3768510.35826K562EFTUD2
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for HBA1 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for HBA1 is not available on ENCORE database.

  • 108 RBPs can affect the levels of HBA1.  








The Knockdown/knockout RNA-Seq assay for HBA1 is not available on ENCORE database.





108 RBPs can affect the gene expression of HBA1 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
HBA1ENSG00000206172.411.8393046.19210-1.964103.952602.77420HepG2CCAR1
HBA1ENSG00000206172.42.8640015.11200-2.399602.030501.43620HepG2DKC1
HBA1ENSG00000206172.410.1167048.81760-2.270704.910603.79410HepG2LARP4
HBA1ENSG00000206172.420.705804.710402.136002.236201.63060HepG2PUM2
HBA1ENSG00000206172.446.317908.201702.497505.452104.48480HepG2TARDBP
HBA1ENSG00000206172.411.152101.508702.885901.999101.50480HepG2TRIM56
HBA1ENSG00000206172.447.9913012.172301.979104.595703.85540HepG2UTP3
HBA1ENSG00000206172.438.2880013.866201.465202.788702.24030HepG2ZNF622
HBA1ENSG00000206172.434972.2070014485.134001.2715055.0622052.61120K562AGGF1
HBA1ENSG00000206172.415143.212708600.901200.8160011.054608.19740K562AKAP1
HBA1ENSG00000206172.441952.2798015918.725301.3979050.7481046.95200K562AKAP8
HBA1ENSG00000206172.477155.3049015072.869602.355706.106305.11060K562AKAP8L
HBA1ENSG00000206172.450881.4779027142.059800.906503.428702.79020K562AQR
HBA1ENSG00000206172.429483.1001015815.883500.8984018.0773015.51890K562ATP5C1
HBA1ENSG00000206172.413486.140808982.282300.586205.726603.71500K562BCCIP
HBA1ENSG00000206172.417045.362508680.356100.9735065.1009061.32560K562BCLAF1
HBA1ENSG00000206172.428403.4615011350.029901.323305.390403.80660K562CCAR1
HBA1ENSG00000206172.46584.137803445.366800.934203.627802.14940K562CIRBP
HBA1ENSG00000206172.436756.4311021323.040400.785505.565003.43700K562CKAP4
HBA1ENSG00000206172.48805.2551011801.80300-0.422606.927705.67940K562CPSF6
HBA1ENSG00000206172.412898.390306585.344300.969802.368101.40140K562CSTF2
HBA1ENSG00000206172.423337.5122016995.060600.457404.268002.42810K562DDX19B
HBA1ENSG00000206172.429363.6804018559.818000.661804.290102.76010K562DDX21
HBA1ENSG00000206172.413773.687407610.716700.855706.798304.72780K562DDX27
HBA1ENSG00000206172.431362.7077025186.617900.316307.044206.07100K562DDX47
HBA1ENSG00000206172.412751.765208837.381900.528902.911301.55710K562DDX6
HBA1ENSG00000206172.421278.2526012708.740600.743503.133301.71340K562DHX30
HBA1ENSG00000206172.417048.567705673.771501.587204.355302.71510K562EEF2
HBA1ENSG00000206172.413883.571009575.601700.535803.356702.01260K562EIF2S1
HBA1ENSG00000206172.45421.7065014155.42720-1.3845011.3477010.03660K562EIF2S2
HBA1ENSG00000206172.420504.5885011543.973600.828704.053802.80920K562EIF3A
HBA1ENSG00000206172.410693.989805861.689100.867302.244401.32210K562EIF3D
HBA1ENSG00000206172.46311.164102249.828501.4880079.6155075.73010K562EIF3G
HBA1ENSG00000206172.426231.8498012398.146801.081103.550701.36180K562EIF3H
HBA1ENSG00000206172.414495.702208201.794800.8215014.3795011.75160K562EIF4B
HBA1ENSG00000206172.436109.4536026595.195200.441102.446301.55910K562EIF4G2
HBA1ENSG00000206172.411384.7100015664.88890-0.460403.531501.65220K562ESF1
HBA1ENSG00000206172.412669.923307949.729700.672302.907401.57970K562EWSR1
HBA1ENSG00000206172.438674.6628014731.546701.3924021.2475018.64910K562FIP1L1
HBA1ENSG00000206172.44337.0502012009.37930-1.4694042.9126039.72170K562FMR1
HBA1ENSG00000206172.487.445501158.13550-3.7273013.3691011.56810K562G3BP2
HBA1ENSG00000206172.441877.1842022554.392200.8927018.1215015.69270K562GLRX3
HBA1ENSG00000206172.431389.1780019533.539600.684204.311102.97310K562HNRNPA1
HBA1ENSG00000206172.426705.1850013475.009900.986706.683504.49670K562HNRNPA2B1
HBA1ENSG00000206172.417298.5198011350.516500.607801.932301.42220K562HNRNPC
HBA1ENSG00000206172.48487.7805012117.66620-0.513704.859603.58730K562HNRNPM
HBA1ENSG00000206172.412582.3095019971.78580-0.6666011.534109.93690K562HSPD1
HBA1ENSG00000206172.413945.606703216.113202.116303.017601.92940K562IGF2BP2
HBA1ENSG00000206172.46067.537903249.516400.9008010.933507.67490K562KHSRP
HBA1ENSG00000206172.433935.6687015994.570701.085105.440904.19950K562KIF1C
HBA1ENSG00000206172.46988.427903378.539001.048503.599002.63290K562MAGOH
HBA1ENSG00000206172.426187.6320015311.965700.774105.537303.83880K562MAK16
HBA1ENSG00000206172.413165.408103371.461501.965205.354704.01410K562MATR3
HBA1ENSG00000206172.417549.6390012559.472500.482602.672401.80790K562NAA15
HBA1ENSG00000206172.44822.291809092.84070-0.915004.088702.57690K562NCBP2
HBA1ENSG00000206172.415565.281105410.475001.524404.511202.73830K562NONO
HBA1ENSG00000206172.438729.4908026346.631300.5557012.9341011.48370K562NSUN2
HBA1ENSG00000206172.435950.0729011786.397301.6088016.4262013.32730K562PABPN1
HBA1ENSG00000206172.45690.005603303.205500.784507.310005.04730K562PCBP1
HBA1ENSG00000206172.44163.576303005.794800.470005.078803.74530K562PCBP2
HBA1ENSG00000206172.453146.6604032734.353900.699103.767202.82700K562POLR2G
HBA1ENSG00000206172.429464.0863016724.313600.816903.513202.57000K562PPIG
HBA1ENSG00000206172.423991.1673014012.302000.775703.792401.99410K562PPP1R8
HBA1ENSG00000206172.411863.603705331.948401.153702.520601.80460K562PRPF8
HBA1ENSG00000206172.46334.545403282.572000.948308.695207.55990K562PTBP1
HBA1ENSG00000206172.419254.6754029015.47580-0.591602.512301.73480K562PUF60
HBA1ENSG00000206172.418237.9207030875.90750-0.759504.378403.01060K562PUM1
HBA1ENSG00000206172.418393.2524030238.60230-0.717204.269303.06990K562PUM2
HBA1ENSG00000206172.439719.0185014945.068301.4101027.4752025.75420K562PUS1
HBA1ENSG00000206172.425017.0296012112.440101.046304.922002.29750K562RBFOX2
HBA1ENSG00000206172.460098.2154014564.272102.04480124.94370120.84860K562RBM15
HBA1ENSG00000206172.49799.686703146.791901.6388039.6636036.32130K562RBM22
HBA1ENSG00000206172.417422.342609297.659800.905904.307403.06760K562RCC2
HBA1ENSG00000206172.44312.688403311.682800.380903.573202.30800K562NELFE
HBA1ENSG00000206172.413965.650505427.706201.363403.881902.91320K562RPS19
HBA1ENSG00000206172.424461.7735011792.225201.052605.290903.84380K562RPS3
HBA1ENSG00000206172.432159.1647022500.887700.515105.361502.86030K562SAFB2
HBA1ENSG00000206172.452637.3271029175.544900.851202.370201.37250K562SAFB
HBA1ENSG00000206172.444976.1945030160.368400.576402.812901.35710K562SDAD1
HBA1ENSG00000206172.420204.0056025998.59500-0.363804.430603.41690K562SF3A3
HBA1ENSG00000206172.46104.5440010717.56780-0.812006.214504.72360K562SF3B1
HBA1ENSG00000206172.44032.400001202.554201.7454057.5469053.66450K562SF3B4
HBA1ENSG00000206172.433617.8965014839.222901.1797013.405809.92050K562SMN1
HBA1ENSG00000206172.4971.752402065.93880-1.0881014.6231010.90240K562SND1
HBA1ENSG00000206172.418930.1296012379.076500.612702.509401.36070K562SNRNP200
HBA1ENSG00000206172.420538.164908812.841701.220506.266204.55400K562SRFBP1
HBA1ENSG00000206172.414459.594705328.912701.4400010.640507.41500K562SRP68
HBA1ENSG00000206172.440151.0881026636.229600.5919036.5913033.98910K562SRPK2
HBA1ENSG00000206172.45648.889103218.180000.811602.290401.63960K562SRSF1
HBA1ENSG00000206172.428398.9213011382.065701.319005.962504.31230K562SRSF4
HBA1ENSG00000206172.47306.084103039.736901.2651036.1539032.08730K562SRSF5
HBA1ENSG00000206172.465328.6495037256.437400.810102.970301.39280K562SRSF9
HBA1ENSG00000206172.417914.869705156.251201.7967016.5226014.03630K562SUPV3L1
HBA1ENSG00000206172.420770.4115032837.12820-0.660802.790601.96720K562SYNCRIP
HBA1ENSG00000206172.4397.348801136.70380-1.516402.787301.31760K562TAF15
HBA1ENSG00000206172.410945.628303256.652601.7488017.2852015.21190K562TARDBP
HBA1ENSG00000206172.49100.112803141.502601.5343021.6786019.25220K562TIA1
HBA1ENSG00000206172.49116.357703083.589901.563703.927902.59260K562TRA2A
HBA1ENSG00000206172.426736.0020010411.653001.360505.668604.19890K562TRIM56
HBA1ENSG00000206172.459357.7381031029.440800.935705.617403.05960K562TRNAU1AP
HBA1ENSG00000206172.445275.2205032530.368200.476807.427705.30140K562TROVE2
HBA1ENSG00000206172.428094.2430018903.605600.571503.965501.74260K562TUFM
HBA1ENSG00000206172.4517.710001158.06000-1.161503.450802.55540K562U2AF2
HBA1ENSG00000206172.416878.390605460.372701.628009.691807.73240K562UCHL5
HBA1ENSG00000206172.411730.1514027935.95540-1.2519091.4500088.47370K562UPF1
HBA1ENSG00000206172.428278.5233015155.859800.899703.647802.09930K562UTP18
HBA1ENSG00000206172.417429.1965027276.06000-0.646107.897105.94740K562UTP3
HBA1ENSG00000206172.434930.5285023903.811100.5471010.763508.98780K562WDR3
HBA1ENSG00000206172.459287.4552032174.711700.881706.868004.83460K562WRN
HBA1ENSG00000206172.46604.8603012601.82820-0.932005.726003.18120K562XPO5
HBA1ENSG00000206172.412591.677705565.101101.177906.099904.06570K562XRN2
HBA1ENSG00000206172.446006.6245030568.376700.589704.818903.63300K562ZC3H8
HBA1ENSG00000206172.464450.9799034906.845000.884606.943504.16600K562ZNF800
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for HBA1 is not available on ENCORE database.






No RBPs affect the alternative splcing events of HBA1 on ENCORE database.





The Knockdown/knockout RNA-Seq assay for HBA1 is not avaliable on ENCORE database.