GPRC5C

General Information

Gene Name       : GPRC5C
Gene ID             : ENSG00000170412.16
Essential Gene : No

Functions

Localization

Domains (AlphaFold: GPRC5C)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878GPRC5CENSG00000170412.160.000.240.12ENCSR000AEF
HepG2GPRC5CENSG00000170412.16115.1724.0169.59ENCSR985KAT
K562GPRC5CENSG00000170412.162.951.382.17ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for GPRC5C is not avaliable on ENCORE database.



Proteins bound to RNA
  • GPRC5C RNA is bound by 19 proteins.  







eCLIP assay for GPRC5C is not avaliable on ENCORE database.





19 proteins are bound to GPRC5C RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr177244341772443540+3'-UTR,intron-Distal5.137288.60994HepG2AKAP1
chr177244341772443495+3'-UTR,intron-Distal5.6934012.43282HepG2UPF1
chr177244299672443068+3'-UTR,CDS,intron-Distal3.051845.31883HepG2SND1
chr177244287572443049+3'-UTR,CDS,intron-Distal,intron-Proximal4.742799.68645HepG2AQR
chr177244332572443402+3'-UTR,intron-Distal4.435097.68798HepG2AKAP1
chr177244317472443294+3'-UTR,intron-Distal,intron-Proximal5.6054212.51885HepG2AKAP1
chr177243993772440023+3'-UTR,CDS,intron-Distal,intron-Proximal5.552086.74224HepG2AQR
chr177243586672435929+3'-UTR,CDS,intron-Distal,intron-Proximal3.671339.18134HepG2U2AF2
chr177244331172443392+3'-UTR,intron-Distal3.206193.18660HepG2PABPN1
chr177244330472443344+3'-UTR,intron-Distal3.521426.87401HepG2UPF1
chr177244316972443289+3'-UTR,intron-Distal,intron-Proximal3.2864713.86729HepG2LARP4
chr177243588472435937+3'-UTR,CDS,intron-Distal3.6993613.22515HepG2DDX3X
chr177244002972440090+3'-UTR,CDS,intron-Distal,intron-Proximal3.9044113.02279HepG2PRPF8
chr177244316772443292+3'-UTR,intron-Distal,intron-Proximal5.2280333.15622HepG2UPF1
chr177244334472443417+3'-UTR,intron-Distal5.1537224.44353HepG2UPF1
chr177243582672435917+3'-UTR,CDS,intron-Distal,intron-Proximal3.406473.39008HepG2AQR
chr177244004972440090+3'-UTR,CDS,intron-Distal,intron-Proximal4.332273.59236HepG2AQR
chr177244316072443254+3'-UTR,CDS,intron-Distal,intron-Proximal3.1009110.30206HepG2RPS3
chr177242807172428149+5'-UTR,intron-Distal,intron-Proximal4.7196815.21498HepG2DDX3X
chr177242762472427677+5'-UTR,intron-Distal4.1315023.48948HepG2DDX3X
chr177242796972428013+5'-UTR,intron-Distal,intron-Proximal3.4575411.62895HepG2DDX3X
chr177242980372429859+5'-UTR,intron-Distal3.671475.08839HepG2CSTF2T
chr177242766772427731+5'-UTR,intron-Distal3.244994.26847HepG2NKRF
chr177242768672427805+5'-UTR,intron-Distal4.3229633.15656HepG2DDX3X
chr177242793472427969+5'-UTR,intron-Distal4.2390117.14888HepG2DDX3X
chr177242788772427918+5'-UTR,intron-Distal3.836603.40229HepG2CSTF2T
chr177242829772428331+5'-UTR,intron-Distal,intron-Proximal3.011103.23466HepG2CSTF2T
chr177243664372436674+CDS,intron-Distal3.793724.07434HepG2SND1
chr177243611872436169+CDS,intron-Distal3.461344.88774HepG2RBM15
chr177243593472436012+CDS,intron-Distal4.1100317.01510HepG2RPS3
chr177243633272436369+CDS,intron-Distal3.494078.75653HepG2DDX3X
chr177243603672436092+CDS,intron-Distal4.0604910.86334HepG2DDX3X
chr177243694272437012+CDS,intron-Distal,intron-Proximal5.0048111.09609HepG2PRPF8
chr177243650372436538+CDS,intron-Distal3.542474.07434HepG2SND1
chr177243629472436381+CDS,intron-Distal3.672149.52229HepG2RBM15
chr177243656372436635+CDS,intron-Distal3.5682713.96409HepG2SND1
chr177243644872436503+CDS,intron-Distal3.191686.02691HepG2SND1
chr177243623372436265+CDS,intron-Distal,intron-Proximal3.131504.87670HepG2DDX3X
chr177243645872436495+CDS,intron-Distal4.125895.96402HepG2RPS3
chr177243632672436388+CDS,intron-Distal3.339277.31048HepG2SND1
chr177243594572436025+CDS,intron-Distal3.9534123.95409HepG2DDX3X
chr177244202172442096+intron-Distal3.476475.42306HepG2XPO5
chr177244582872445962+intron-Distal4.761345.71320HepG2AKAP1
chr177244035172440386+intron-Distal3.411833.12080HepG2XPO5
chr177242922372429285+intron-Distal3.174133.47356HepG2HNRNPK
chr177244071772440778+intron-Distal4.298615.84043HepG2NKRF
chr177243986772439937+intron-Distal,intron-Proximal5.339006.03362HepG2AQR
chr177243012072430169+intron-Distal4.056584.14792HepG2XPO5
chr177243022072430258+intron-Distal4.306565.11753HepG2CSTF2T
chr177242934772429384+intron-Distal3.620785.09764HepG2NKRF
chr177244586272445922+intron-Distal4.171203.64119HepG2UPF1
chr177242872772428795+intron-Distal,intron-Proximal3.183368.72988HepG2NKRF
chr177243985672439943+intron-Distal,intron-Proximal3.189465.95804HepG2SF3B4
chr177243964972439754+intron-Distal3.142636.34084HepG2PRPF4
chr177242890372428964+intron-Distal3.999813.00241HepG2SFPQ
chr177242882272428878+intron-Distal3.440166.73713HepG2CSTF2T
chr177244077872440888+intron-Distal4.6606512.44646HepG2NKRF
chr177242871272428781+intron-Distal,intron-Proximal4.308514.86307HepG2PRPF4
chr177244072772440832+intron-Distal3.850257.81658HepG2XRN2
chr177242970772429735+intron-Distal3.836603.40229HepG2CSTF2T
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for GPRC5C is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for GPRC5C is not available on ENCORE database.

  • 91 RBPs can affect the levels of GPRC5C.  








The Knockdown/knockout RNA-Seq assay for GPRC5C is not available on ENCORE database.





91 RBPs can affect the gene expression of GPRC5C :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
GPRC5CENSG00000170412.124720.635402675.302000.8192019.1136017.61190HepG2AUH
GPRC5CENSG00000170412.121439.803901006.134300.516902.632801.75350HepG2BCLAF1
GPRC5CENSG00000170412.121793.60110650.750301.4626020.7785019.37190HepG2BOP1
GPRC5CENSG00000170412.122258.964102709.73520-0.262504.478703.67120HepG2CKAP4
GPRC5CENSG00000170412.122659.522901644.973200.693003.080001.91410HepG2CPSF7
GPRC5CENSG00000170412.121136.85580887.467900.357203.717202.53560HepG2YBX3
GPRC5CENSG00000170412.122629.202001552.152000.760309.147808.10460HepG2CELF1
GPRC5CENSG00000170412.123079.018701668.898700.8835041.3706039.17260HepG2DAZAP1
GPRC5CENSG00000170412.121562.468202506.82600-0.6820020.2717018.51280HepG2DDX19B
GPRC5CENSG00000170412.12809.578301275.88030-0.656302.470401.82560HepG2DDX21
GPRC5CENSG00000170412.12782.607701250.28010-0.675902.530901.66020HepG2DDX24
GPRC5CENSG00000170412.121775.664201138.826600.640703.675602.79780HepG2DDX55
GPRC5CENSG00000170412.128423.535403195.385701.3983019.5406018.09440HepG2DDX6
GPRC5CENSG00000170412.121421.508502593.29250-0.8674023.8825022.37540HepG2DKC1
GPRC5CENSG00000170412.122291.18250871.454301.3945018.1328016.49510HepG2DNAJC21
GPRC5CENSG00000170412.121323.16550863.719300.6153013.8958012.55090HepG2DNAJC2
GPRC5CENSG00000170412.12761.199301386.08490-0.864707.631806.18140HepG2EEF2
GPRC5CENSG00000170412.12703.396001155.27090-0.715805.996304.36320HepG2EFTUD2
GPRC5CENSG00000170412.125341.592203069.489800.799204.002903.29880HepG2EIF2S1
GPRC5CENSG00000170412.122343.005701577.244500.570906.932405.66840HepG2EIF4G2
GPRC5CENSG00000170412.121005.460001730.91790-0.783702.685901.60910HepG2ESF1
GPRC5CENSG00000170412.121749.894203175.21470-0.859601.965601.40080HepG2G3BP1
GPRC5CENSG00000170412.12624.118801001.66750-0.682506.166404.83050HepG2GEMIN5
GPRC5CENSG00000170412.123020.594802587.706800.223102.557301.61210HepG2HDGF
GPRC5CENSG00000170412.121675.280501139.516200.555908.325607.16750HepG2HNRNPF
GPRC5CENSG00000170412.122482.288801520.225100.7073025.9687024.13350HepG2HNRNPL
GPRC5CENSG00000170412.12906.39000646.134800.488201.920801.38790HepG2HNRNPLL
GPRC5CENSG00000170412.121506.547901122.098500.424904.929703.98900HepG2IGF2BP1
GPRC5CENSG00000170412.121320.50000993.006600.411107.228206.10280HepG2ILF2
GPRC5CENSG00000170412.123051.278602477.679400.300304.767703.43660HepG2KIF1C
GPRC5CENSG00000170412.121219.571401685.92540-0.467202.037701.33400HepG2LARP4
GPRC5CENSG00000170412.122997.427701654.878900.8569023.2218021.17130HepG2NOL12
GPRC5CENSG00000170412.12828.26120472.573900.809405.731203.70310HepG2NOLC1
GPRC5CENSG00000170412.124952.239101780.691901.475506.581705.16750HepG2PABPC1
GPRC5CENSG00000170412.122157.643903206.37760-0.571508.550507.58040HepG2PCBP1
GPRC5CENSG00000170412.12654.48400930.41300-0.507504.112202.60400HepG2PKM
GPRC5CENSG00000170412.121607.52930867.069600.8905021.6944019.77970HepG2PPIL4
GPRC5CENSG00000170412.12650.00930958.55760-0.560402.584001.83460HepG2PRPF4
GPRC5CENSG00000170412.122151.765403262.83430-0.600607.518506.70520HepG2PTBP1
GPRC5CENSG00000170412.122148.723501579.739400.443705.134304.35290HepG2PUF60
GPRC5CENSG00000170412.122830.413501675.743800.756104.132203.32000HepG2PUM2
GPRC5CENSG00000170412.121978.671502760.94910-0.480608.217807.25350HepG2PUS1
GPRC5CENSG00000170412.122285.366003533.25010-0.628604.529903.75770HepG2QKI
GPRC5CENSG00000170412.121495.956403631.03410-1.2793026.3785025.05520HepG2NELFE
GPRC5CENSG00000170412.121580.803403382.15430-1.0973021.3808019.94390HepG2RECQL
GPRC5CENSG00000170412.12693.750301094.86620-0.658306.259705.37630HepG2RPS19
GPRC5CENSG00000170412.121624.53430865.737500.9079028.7823027.01700HepG2SAFB2
GPRC5CENSG00000170412.12976.62140639.474600.610802.818402.10520HepG2SF3B1
GPRC5CENSG00000170412.122475.098603396.62780-0.456604.224403.51840HepG2SF3B4
GPRC5CENSG00000170412.122691.515501514.754200.8292024.5560022.86890HepG2SLBP
GPRC5CENSG00000170412.121226.771801009.609400.281003.433302.72950HepG2SMN1
GPRC5CENSG00000170412.121336.85260711.553200.909702.765501.98480HepG2SNRNP70
GPRC5CENSG00000170412.122485.531602899.62660-0.222302.948402.43660HepG2SRFBP1
GPRC5CENSG00000170412.121076.528203545.50890-1.7196041.2549039.90380HepG2SRSF1
GPRC5CENSG00000170412.122666.952401559.780300.7737024.8780023.27320HepG2SRSF5
GPRC5CENSG00000170412.121934.881301119.535600.7892022.0103020.39840HepG2SRSF7
GPRC5CENSG00000170412.121466.025802517.63160-0.7802025.3197024.11730HepG2SSB
GPRC5CENSG00000170412.122958.263201361.827801.1191010.549108.82550HepG2SUPT6H
GPRC5CENSG00000170412.12788.031003187.29900-2.0160045.6082043.68820HepG2TAF15
GPRC5CENSG00000170412.121483.84410759.643000.9658010.905109.18690HepG2TFIP11
GPRC5CENSG00000170412.122336.009802928.20830-0.326003.200302.30590HepG2TIA1
GPRC5CENSG00000170412.122087.04770953.052301.1307026.3805024.86220HepG2TRIM56
GPRC5CENSG00000170412.12593.20550893.89050-0.591604.411702.43710HepG2TROVE2
GPRC5CENSG00000170412.122306.848601543.362600.579702.600301.75510HepG2TUFM
GPRC5CENSG00000170412.122608.301601633.640900.674902.618101.80410HepG2UBE2L3
GPRC5CENSG00000170412.121162.01060669.477300.795408.245106.93430HepG2UCHL5
GPRC5CENSG00000170412.122587.120301741.469400.570907.798206.72210HepG2UPF1
GPRC5CENSG00000170412.121121.025301681.30680-0.584805.429504.63780HepG2UTP3
GPRC5CENSG00000170412.122876.406501915.270600.586606.075705.34770HepG2ZNF622
GPRC5CENSG00000170412.1258.8729026.386601.157702.528501.36660K562ABCF1
GPRC5CENSG00000170412.1275.7455036.961801.035002.740002.17420K562AGGF1
GPRC5CENSG00000170412.1276.4687040.613400.912802.421001.51130K562AKAP8
GPRC5CENSG00000170412.1282.2947038.459901.097302.915702.24500K562AKAP8L
GPRC5CENSG00000170412.1279.2416035.058801.176403.328602.27380K562BCLAF1
GPRC5CENSG00000170412.1283.4715013.518302.626309.358107.70330K562BOP1
GPRC5CENSG00000170412.1277.3347036.488101.083603.051001.69920K562CIRBP
GPRC5CENSG00000170412.1275.6360031.074801.283203.508201.85110K562CKAP4
GPRC5CENSG00000170412.1296.9392041.939701.208704.108602.74210K562CPEB4
GPRC5CENSG00000170412.1252.2790014.369301.863103.974003.03420K562CPSF6
GPRC5CENSG00000170412.1296.4902057.546800.745502.228001.30190K562DDX3X
GPRC5CENSG00000170412.1292.0390028.771101.677506.045604.65280K562EFTUD2
GPRC5CENSG00000170412.12285.2682042.938102.7319035.2757033.26450K562EIF2S2
GPRC5CENSG00000170412.1254.5561018.978401.523302.389901.60220K562FIP1L1
GPRC5CENSG00000170412.1276.1641014.629102.380207.928706.43460K562FMR1
GPRC5CENSG00000170412.1231.1422062.52430-1.005502.327501.76430K562FXR1
GPRC5CENSG00000170412.1261.1570013.715602.156605.861104.70940K562GPKOW
GPRC5CENSG00000170412.12134.4242057.208501.232404.793103.79890K562GRSF1
GPRC5CENSG00000170412.1272.4712034.026001.090702.627001.63650K562IGF2BP2
GPRC5CENSG00000170412.1257.1392013.389402.093302.947502.04120K562METAP2
GPRC5CENSG00000170412.1254.5411021.552701.339403.234102.33530K562PPIG
GPRC5CENSG00000170412.1261.9603034.760400.833801.943201.36880K562PTBP1
GPRC5CENSG00000170412.12204.5218091.467101.160806.504405.01660K562PUM2
GPRC5CENSG00000170412.1287.0217038.145301.189803.418402.82400K562PUS1
GPRC5CENSG00000170412.1286.8212033.341701.380605.102703.92110K562RBM22
GPRC5CENSG00000170412.1295.9022054.590800.812802.637001.84030K562SF3A3
GPRC5CENSG00000170412.1238.4625013.057101.558502.423001.51850K562SF3B1
GPRC5CENSG00000170412.1274.6274025.358901.557103.604702.03430K562SFPQ
GPRC5CENSG00000170412.1276.9799034.074601.175703.240802.47920K562SRSF1
GPRC5CENSG00000170412.1273.7574034.490401.096503.042302.29970K562TARDBP
GPRC5CENSG00000170412.1255.1711022.168601.315303.059201.58880K562TRIP6
GPRC5CENSG00000170412.1261.6328028.681301.103502.329001.40300K562UCHL5
GPRC5CENSG00000170412.1283.9397039.755301.078103.049701.78200K562UTP3
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for GPRC5C is not available on ENCORE database.





6 RBPs can affect the splicing of GPRC5C :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEGPRC5CENSG00000170412.12chr17+7243681272436966724358837243618572439956724400510.051000.000100.01417includedHepG2DDX6
A5SSGPRC5CENSG00000170412.12chr17+7243921572439417724392157243927372439956724400510.373000.000030.00515longerHepG2SRSF9
A5SSGPRC5CENSG00000170412.12chr17+7243921572439417724392157243927372439956724400510.190000.001530.08693longerHepG2HNRNPK
A5SSGPRC5CENSG00000170412.12chr17+7243921572439417724392157243927372439956724400510.210000.000240.04661longerHepG2NCBP2
A5SSGPRC5CENSG00000170412.12chr17+7243921572439417724392157243927372439956724400510.199000.000130.05180longerHepG2KHSRP
A5SSGPRC5CENSG00000170412.12chr17+724358837243696672435883724361857243995672440051-0.056000.000000.00067shorterHepG2PCBP1

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for GPRC5C is not avaliable on ENCORE database.