ERGIC2

General Information

Gene Name       : ERGIC2
Gene ID             : ENSG00000087502.17
Essential Gene : No

Functions

Localization

Domains (AlphaFold: ERGIC2)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878ERGIC2ENSG00000087502.1772.3063.0467.67ENCSR000AEF
HepG2ERGIC2ENSG00000087502.1733.6975.6754.68ENCSR985KAT
K562ERGIC2ENSG00000087502.1743.8057.9750.88ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for ERGIC2 is not avaliable on ENCORE database.



Proteins bound to RNA
  • ERGIC2 RNA is bound by 7 proteins.  







eCLIP assay for ERGIC2 is not avaliable on ENCORE database.





7 proteins are bound to ERGIC2 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr122952304529523114-3'-UTR,CDS,intron-Distal,intron-Proximal3.255563.31745K562ZNF622
chr122949615929496257-3'-UTR,CDS,intron-Distal,intron-Proximal4.1416919.51897HepG2U2AF2
chr122949616029496259-3'-UTR,CDS,intron-Distal,intron-Proximal4.373793.65740K562U2AF2
chr122949355529493596-3'-UTR,intron-Distal5.4438514.07914K562PABPC4
chr122949409629494172-3'-UTR,CDS,intron-Distal4.395244.29034K562U2AF2
chr122952305229523162-CDS,intron-Distal,intron-Proximal4.033785.06180HepG2BCLAF1
chr122951980329519882-CDS,intron-Distal,intron-Proximal3.798517.65975HepG2BCLAF1
chr122951057129510698-CDS,intron-Distal,intron-Proximal3.877536.86590K562SF3B4
chr122952446029524544-CDS,intron-Distal,intron-Proximal3.326243.40321HepG2GRWD1
chr122949823429498342-intron-Distal,intron-Proximal3.878683.71397K562KHSRP
chr122949557229495652-intron-Distal4.062554.14103K562KHSRP
chr122951689529517020-intron-Distal3.556515.14864K562KHSRP
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for ERGIC2 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for ERGIC2 is not available on ENCORE database.

  • 93 RBPs can affect the levels of ERGIC2.  








The Knockdown/knockout RNA-Seq assay for ERGIC2 is not available on ENCORE database.





93 RBPs can affect the gene expression of ERGIC2 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
ERGIC2ENSG00000087502.13678.87850926.71460-0.449002.964201.98660HepG2ABCF1
ERGIC2ENSG00000087502.131826.647601043.366900.807908.895508.00160HepG2AKAP1
ERGIC2ENSG00000087502.131190.84070801.364600.571309.291808.15640HepG2AUH
ERGIC2ENSG00000087502.13331.21980626.27790-0.919006.510605.04130HepG2BCCIP
ERGIC2ENSG00000087502.13563.14360913.12890-0.697307.437706.51440HepG2BOP1
ERGIC2ENSG00000087502.13757.63380634.581100.255602.113701.52060HepG2CKAP4
ERGIC2ENSG00000087502.131042.63960838.321700.314602.057801.45430HepG2CPSF6
ERGIC2ENSG00000087502.13449.16650763.27550-0.765008.301506.49060HepG2CPSF7
ERGIC2ENSG00000087502.13473.03690587.03910-0.311502.567001.76140HepG2DDX19B
ERGIC2ENSG00000087502.131092.30310856.878400.350102.574401.32120HepG2DDX47
ERGIC2ENSG00000087502.131069.34670808.307600.403702.969701.92620HepG2DDX5
ERGIC2ENSG00000087502.13581.35380706.00170-0.280302.448601.82920HepG2DNAJC2
ERGIC2ENSG00000087502.13527.54270703.07070-0.414403.007701.78200HepG2EIF2S2
ERGIC2ENSG00000087502.13446.22240912.32770-1.031806.878005.86800HepG2EIF4A3
ERGIC2ENSG00000087502.13811.89860607.566700.418203.272602.04030HepG2FASTKD2
ERGIC2ENSG00000087502.131212.78030935.780800.374002.134701.45470HepG2FIP1L1
ERGIC2ENSG00000087502.13768.35010555.584900.467703.863002.94270HepG2FUBP3
ERGIC2ENSG00000087502.13535.74360920.16010-0.780305.091904.17370HepG2FXR1
ERGIC2ENSG00000087502.13651.57750906.14430-0.475802.574801.71800HepG2G3BP2
ERGIC2ENSG00000087502.131224.18570840.103500.543102.672501.33600HepG2HLTF
ERGIC2ENSG00000087502.13408.86600719.09350-0.814608.842507.78330HepG2HNRNPA1
ERGIC2ENSG00000087502.13466.28570799.86580-0.778508.420707.26390HepG2HNRNPC
ERGIC2ENSG00000087502.13586.41550802.47050-0.452503.086302.33180HepG2HNRNPF
ERGIC2ENSG00000087502.13475.82190790.21730-0.731805.926504.90720HepG2IGF2BP1
ERGIC2ENSG00000087502.13601.01620867.89460-0.530102.776002.09980HepG2IGF2BP2
ERGIC2ENSG00000087502.13462.13970686.99360-0.572003.680402.27400HepG2KHDRBS1
ERGIC2ENSG00000087502.131045.206001459.73630-0.481902.037201.33360HepG2LARP4
ERGIC2ENSG00000087502.13391.86890658.79060-0.749407.071805.18890HepG2LIN28B
ERGIC2ENSG00000087502.13645.22650920.47980-0.512602.818702.15820HepG2MAGOH
ERGIC2ENSG00000087502.13393.991901016.35970-1.3672033.1417030.76140HepG2NOL12
ERGIC2ENSG00000087502.13473.09630844.05030-0.835205.095804.12780HepG2PABPC4
ERGIC2ENSG00000087502.13822.76530538.147800.612408.453007.20220HepG2PRPF4
ERGIC2ENSG00000087502.13718.94630970.17160-0.432403.864503.17300HepG2PUF60
ERGIC2ENSG00000087502.13842.555401029.11330-0.288602.342301.72340HepG2PUM2
ERGIC2ENSG00000087502.131094.53370901.408200.280002.221001.65120HepG2QKI
ERGIC2ENSG00000087502.131311.59950802.052400.709503.200602.44570HepG2RAVER1
ERGIC2ENSG00000087502.131277.65910992.773400.363902.904002.02730HepG2RBM15
ERGIC2ENSG00000087502.131136.33110768.987400.563307.813407.04550HepG2RBM22
ERGIC2ENSG00000087502.131122.19240818.096700.455904.479103.63760HepG2RBM25
ERGIC2ENSG00000087502.13589.53120926.29530-0.651909.183008.30070HepG2NELFE
ERGIC2ENSG00000087502.13697.03870862.73850-0.307702.606302.00580HepG2RECQL
ERGIC2ENSG00000087502.13533.91570697.72120-0.386002.250501.52410HepG2RPS2
ERGIC2ENSG00000087502.13529.21680723.98910-0.452102.351401.61110HepG2RPS3A
ERGIC2ENSG00000087502.13604.49280470.084100.362702.074201.38440HepG2RRP9
ERGIC2ENSG00000087502.13762.07080547.902200.475902.829401.88010HepG2SERBP1
ERGIC2ENSG00000087502.13425.90020897.72070-1.0758015.0846013.58100HepG2SF3B1
ERGIC2ENSG00000087502.13593.93750866.54160-0.545006.699405.84260HepG2SF3B4
ERGIC2ENSG00000087502.131797.07560998.860500.847207.135605.87560HepG2SNRNP70
ERGIC2ENSG00000087502.131300.79910868.557100.5826011.0222010.20210HepG2SRFBP1
ERGIC2ENSG00000087502.13589.59120788.35610-0.419102.807202.10600HepG2SRSF7
ERGIC2ENSG00000087502.13944.54240735.860700.360103.993803.35420HepG2SRSF9
ERGIC2ENSG00000087502.13944.481001089.38690-0.205901.978201.43520HepG2SUCLG1
ERGIC2ENSG00000087502.13816.11010631.965100.368802.970501.99880HepG2SUPT6H
ERGIC2ENSG00000087502.13408.21750772.05300-0.9194013.6712012.70370HepG2TIAL1
ERGIC2ENSG00000087502.13921.91060778.983600.242902.031901.53470HepG2TRIM56
ERGIC2ENSG00000087502.13703.32990947.75420-0.430303.890602.83260HepG2TUFM
ERGIC2ENSG00000087502.131125.27330800.553500.491102.437201.84420HepG2U2AF1
ERGIC2ENSG00000087502.13261.45060362.16200-0.470102.053101.39930HepG2UCHL5
ERGIC2ENSG00000087502.13588.67400714.01330-0.278502.187401.64140HepG2UTP3
ERGIC2ENSG00000087502.13722.53540531.079200.444004.886804.03660HepG2ZC3H8
ERGIC2ENSG00000087502.13611.71020933.52260-0.609808.910007.96680K562AGGF1
ERGIC2ENSG00000087502.13739.131501025.70980-0.472704.515003.18500K562AKAP8
ERGIC2ENSG00000087502.13572.65770971.35030-0.762308.073406.90030K562AKAP8L
ERGIC2ENSG00000087502.13678.827101244.97130-0.8750011.5135010.43630K562AQR
ERGIC2ENSG00000087502.13435.60750722.64960-0.730309.628107.07890K562BCCIP
ERGIC2ENSG00000087502.13558.85920698.35740-0.321502.598301.67150K562BCLAF1
ERGIC2ENSG00000087502.13738.77640959.25300-0.376802.558801.72110K562BOP1
ERGIC2ENSG00000087502.131126.687801372.67950-0.284902.608701.53540K562CPEB4
ERGIC2ENSG00000087502.13409.05540529.80820-0.373202.613501.58900K562CSTF2
ERGIC2ENSG00000087502.13704.25020865.80070-0.297902.505901.35730K562DDX21
ERGIC2ENSG00000087502.13353.17350615.10960-0.800503.101601.30120K562DDX51
ERGIC2ENSG00000087502.13389.92910530.30440-0.443603.622102.07160K562DDX6
ERGIC2ENSG00000087502.13798.70130968.91380-0.278702.276501.61450K562EIF2S2
ERGIC2ENSG00000087502.13542.35290666.39190-0.297102.049101.35640K562EIF3G
ERGIC2ENSG00000087502.13335.47240476.97580-0.507703.033701.66780K562EWSR1
ERGIC2ENSG00000087502.13508.70410681.44070-0.421803.332401.92410K562EXOSC5
ERGIC2ENSG00000087502.13719.80000568.278700.340902.599402.00900K562FXR1
ERGIC2ENSG00000087502.131022.204401291.23250-0.337102.663001.92050K562GRSF1
ERGIC2ENSG00000087502.13501.52910761.41300-0.602305.644304.82160K562HNRNPC
ERGIC2ENSG00000087502.13522.59130679.85060-0.379502.511101.43370K562HNRNPF
ERGIC2ENSG00000087502.131104.19590749.006100.559804.931403.23100K562HNRNPK
ERGIC2ENSG00000087502.131040.746501283.64910-0.302602.371101.40070K562HNRNPL
ERGIC2ENSG00000087502.131172.98040888.571400.400502.622401.71870K562HNRNPM
ERGIC2ENSG00000087502.13695.699801030.92350-0.567406.790505.36280K562KIF1C
ERGIC2ENSG00000087502.13506.97860772.05030-0.606804.968802.88690K562LIN28B
ERGIC2ENSG00000087502.13468.30520986.78420-1.0753016.4767013.22580K562MAK16
ERGIC2ENSG00000087502.13709.65650950.53800-0.421603.544702.54630K562METAP2
ERGIC2ENSG00000087502.131284.280501733.38690-0.432603.638402.34260K562MSI2
ERGIC2ENSG00000087502.13683.28560980.78290-0.521407.461706.19160K562MTPAP
ERGIC2ENSG00000087502.13553.57760809.48300-0.548203.404702.40600K562NAA15
ERGIC2ENSG00000087502.131268.027301778.75070-0.488304.958302.92540K562NOL12
ERGIC2ENSG00000087502.13780.726101089.72780-0.481107.981706.80670K562NSUN2
ERGIC2ENSG00000087502.13462.14410702.04680-0.603204.472202.13530K562PABPC4
ERGIC2ENSG00000087502.13386.22560771.45990-0.998103.197702.11320K562PABPN1
ERGIC2ENSG00000087502.13468.76320963.47220-1.0394011.2459010.20070K562PUS1
ERGIC2ENSG00000087502.13586.10660938.62660-0.679409.532808.45600K562RBM15
ERGIC2ENSG00000087502.13683.81400926.13980-0.437602.802201.82260K562SF3B1
ERGIC2ENSG00000087502.13539.03390690.55580-0.357402.544901.72640K562SF3B4
ERGIC2ENSG00000087502.13459.74250810.30310-0.817602.806301.56840K562SNRNP200
ERGIC2ENSG00000087502.13451.51930590.33100-0.386702.196301.30310K562SRFBP1
ERGIC2ENSG00000087502.13517.28240708.74020-0.454303.389802.20720K562SRSF5
ERGIC2ENSG00000087502.13628.12570772.70290-0.298902.536001.41890K562SRSF7
ERGIC2ENSG00000087502.13474.89650656.62050-0.467402.906801.94620K562TIAL1
ERGIC2ENSG00000087502.13532.20890718.88360-0.433803.061601.90340K562TRA2A
ERGIC2ENSG00000087502.13541.10510697.43660-0.366202.312101.45900K562TRIM56
ERGIC2ENSG00000087502.13857.61370664.758500.367403.140202.28490K562U2AF2
ERGIC2ENSG00000087502.13350.35610568.36860-0.698002.366201.43240K562UCHL5
ERGIC2ENSG00000087502.13978.542701155.46230-0.239802.234601.58440K562UPF1
ERGIC2ENSG00000087502.13606.44970976.69940-0.687503.417701.92790K562UTP18
ERGIC2ENSG00000087502.13724.45410988.69130-0.448604.191003.10620K562WDR3
ERGIC2ENSG00000087502.131126.626601402.55090-0.316002.504401.69150K562ZC3H8
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for ERGIC2 is not available on ENCORE database.





1 RBPs can affect the splicing of ERGIC2 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
A3SSERGIC2ENSG00000087502.13chr12-2949605229496277294960522949621529498375294985200.081000.000000.00000longerK562AQR
A3SSERGIC2ENSG00000087502.13chr12-2949837529498520294983752949847329502011295022570.121000.000000.00000longerK562AQR
A3SSERGIC2ENSG00000087502.13chr12-2949466629494791294946662949474929496052294962770.106000.000340.00266longerK562AQR

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for ERGIC2 is not avaliable on ENCORE database.