CCDC137

General Information

Gene Name       : CCDC137
Gene ID             : ENSG00000185298.12
Essential Gene : No

Functions

Localization

Domains (AlphaFold: CCDC137)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878CCDC137ENSG00000185298.1220.5614.2017.38ENCSR000AEF
HepG2CCDC137ENSG00000185298.1233.9625.4129.69ENCSR985KAT
K562CCDC137ENSG00000185298.1229.6925.7927.74ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for CCDC137 is not avaliable on ENCORE database.



Proteins bound to RNA
  • CCDC137 RNA is bound by 19 proteins.  







eCLIP assay for CCDC137 is not avaliable on ENCORE database.





19 proteins are bound to CCDC137 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr177964026079640319+3'-UTR3.560114.51666K562RBM15
chr177964058479640651+3'-UTR4.909464.34093HepG2RBM15
chr177963918479639252+3'-UTR,CDS,intron-Proximal3.884435.99968K562PRPF8
chr177963918379639229+3'-UTR,CDS,intron-Proximal5.945569.95272K562AQR
chr177963734379637449+3'-UTR,CDS3.699358.06517K562PUM1
chr177963955079639611+3'-UTR,CDS4.153728.69525HepG2PPIG
chr177964054979640649+3'-UTR4.354845.40628HepG2LSM11
chr177964045479640504+3'-UTR3.574658.50021K562YBX3
chr177963883279638897+3'-UTR,CDS,intron-Proximal3.009264.79866HepG2PRPF8
chr177963997979640042+3'-UTR,intron-Proximal4.878666.29854K562UPF1
chr177963725579637274+3'-UTR,CDS,intron-Proximal4.521034.42734K562UCHL5
chr177963731679637386+3'-UTR,CDS3.147895.39456HepG2GRWD1
chr177963875879638792+3'-UTR,CDS,intron-Proximal3.364993.56873HepG2PRPF8
chr177963877679638853+3'-UTR,CDS3.175744.17822HepG2PPIG
chr177963972079639788+3'-UTR,CDS3.508886.27819HepG2PPIG
chr177963918479639199+3'-UTR,CDS,intron-Proximal3.515075.13777HepG2PRPF8
chr177963731779637391+3'-UTR,CDS3.132364.42779K562GRWD1
chr177964025379640370+3'-UTR3.752895.05294K562UPF1
chr177963947979639569+3'-UTR,CDS,intron-Proximal4.4359518.60316K562SF3B4
chr177963875779638820+3'-UTR,CDS,intron-Proximal3.998104.49024K562AQR
chr177963733279637391+3'-UTR,CDS3.371864.30396K562UCHL5
chr177963911179639181+3'-UTR,CDS3.384417.84823HepG2PPIG
chr177963977879639818+3'-UTR,intron-Proximal3.475153.93112K562RBM15
chr177963726379637324+3'-UTR,CDS3.252985.94292K562ZNF622
chr177963739179637456+3'-UTR,CDS3.343804.15299K562GRWD1
chr177964007879640116+3'-UTR3.578933.06830K562UPF1
chr177963723479637283+3'-UTR,CDS,intron-Proximal3.945206.42898K562AQR
chr177963997879640050+3'-UTR,intron-Proximal3.289293.44343HepG2AKAP1
chr177964009579640184+3'-UTR3.228414.98667HepG2UPF1
chr177963948679639550+3'-UTR,CDS,intron-Proximal3.424306.34669HepG2SF3B4
chr177964013779640194+3'-UTR4.530923.87930K562UPF1
chr177964054679640628+3'-UTR4.876855.94928K562UPF1
chr177963874879638812+3'-UTR,CDS,intron-Proximal3.101296.37665HepG2AQR
chr177963988579639957+3'-UTR,intron-Proximal4.296974.93188HepG2UPF1
chr177963379279633877+5'-UTR,CDS3.442177.70405K562ZNF622
chr177963482679634881+5'-UTR,CDS3.754045.10069HepG2GRWD1
chr177963470379634762+5'-UTR,CDS,intron-Proximal4.987674.07325HepG2SF3B4
chr177963481279634900+5'-UTR,CDS,intron-Proximal3.375756.95218K562UCHL5
chr177963488979634932+5'-UTR,CDS,intron-Proximal4.683717.79098HepG2PRPF8
chr177963377079633834+5'-UTR,CDS4.299214.26442K562DDX3X
chr177963481379634884+5'-UTR,CDS3.694257.13692K562ZNF622
chr177963380979633878+CDS5.142076.96356K562UCHL5
chr177963748379637586+intron-Distal,intron-Proximal3.7727811.96791HepG2PRPF8
chr177963751279637599+intron-Distal,intron-Proximal5.1987710.90574K562EFTUD2
chr177963749979637702+intron-Distal,intron-Proximal3.5897216.81545K562PRPF8
chr177963775079637792+intron-Distal5.060865.69951K562AQR
chr177963860279638685+intron-Distal,intron-Proximal4.353123.70701HepG2PRPF4
chr177963903579639087+intron-Proximal4.639455.32775HepG2SF3B4
chr177963491379634971+intron-Proximal4.257417.08156K562PRPF8
chr177963489879634936+intron-Proximal6.8283223.54371K562AQR
chr177963752079637576+intron-Proximal4.035565.55508K562BUD13
chr177963748379637563+intron-Proximal4.553548.79285K562AQR
chr177963919979639230+intron-Proximal4.300777.13970HepG2PRPF8
chr177963489279634897+intron-Proximal6.6638121.90147K562AQR
chr177963750779637576+intron-Proximal4.814117.65747HepG2EFTUD2
chr177963920579639264+intron-Proximal3.798454.71325HepG2RBM22
chr177963750379637558+intron-Proximal3.152383.04054K562GTF2F1
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for CCDC137 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for CCDC137 is not available on ENCORE database.

  • 116 RBPs can affect the levels of CCDC137.  








The Knockdown/knockout RNA-Seq assay for CCDC137 is not available on ENCORE database.





116 RBPs can affect the gene expression of CCDC137 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
CCDC137ENSG00000185298.8920.30420569.455600.6924012.1610011.07910HepG2ACO1
CCDC137ENSG00000185298.8367.40750269.770200.445502.259401.35860HepG2ADAR
CCDC137ENSG00000185298.8863.04800453.050400.929708.664107.78200HepG2AKAP1
CCDC137ENSG00000185298.8722.31650572.078600.336302.875602.09460HepG2AKAP8L
CCDC137ENSG00000185298.8727.58900374.832900.9568010.079808.64430HepG2ASCC1
CCDC137ENSG00000185298.8717.34140867.30740-0.273902.225101.59700HepG2AUH
CCDC137ENSG00000185298.8906.00340500.665200.855603.691102.61040HepG2BCCIP
CCDC137ENSG00000185298.81123.35410682.906400.718008.595507.60970HepG2BOP1
CCDC137ENSG00000185298.8431.47880576.03810-0.416902.486101.32110HepG2BUD13
CCDC137ENSG00000185298.8583.01210356.126200.711005.603204.52680HepG2CIRBP
CCDC137ENSG00000185298.8713.93540569.268800.326603.002102.31560HepG2CKAP4
CCDC137ENSG00000185298.8692.26860285.071101.2799010.950109.46450HepG2CNOT7
CCDC137ENSG00000185298.8411.38010626.92310-0.607804.366103.51910HepG2CPSF6
CCDC137ENSG00000185298.8391.17200276.649100.499603.392602.26590HepG2YBX3
CCDC137ENSG00000185298.8934.66790578.673400.6916010.737609.63310HepG2CELF1
CCDC137ENSG00000185298.8712.77910526.635800.436505.052903.97160HepG2DDX19B
CCDC137ENSG00000185298.8621.47570433.927400.518103.223102.55440HepG2DDX3X
CCDC137ENSG00000185298.8589.01890372.895500.659403.090002.44040HepG2DDX6
CCDC137ENSG00000185298.8376.11370271.640100.469403.061802.32650HepG2DNAJC21
CCDC137ENSG00000185298.8423.28570269.253900.652606.654505.70460HepG2DNAJC2
CCDC137ENSG00000185298.8602.29250422.702200.510703.099502.12670HepG2EEF2
CCDC137ENSG00000185298.8497.83140358.331700.474302.618002.04130HepG2EIF2S1
CCDC137ENSG00000185298.8827.50410583.222900.504604.551703.06970HepG2EIF2S2
CCDC137ENSG00000185298.8681.80510395.930000.784006.382705.41330HepG2EIF4A3
CCDC137ENSG00000185298.8690.78680385.624400.840905.930504.95120HepG2EIF4B
CCDC137ENSG00000185298.8416.09480588.03500-0.499003.447902.54680HepG2EIF4G2
CCDC137ENSG00000185298.81349.31300995.813900.438205.568004.76430HepG2ETF1
CCDC137ENSG00000185298.81094.98920556.403900.9766016.6460014.71940HepG2EWSR1
CCDC137ENSG00000185298.8798.21020399.684300.9978011.3290010.02530HepG2FXR1
CCDC137ENSG00000185298.8590.64700393.642200.585304.048002.96190HepG2G3BP2
CCDC137ENSG00000185298.8444.47310305.493600.540902.707101.81910HepG2GEMIN5
CCDC137ENSG00000185298.8422.42310263.925600.678503.543602.28140HepG2GRSF1
CCDC137ENSG00000185298.8436.74310543.62880-0.315802.318101.41810HepG2HDGF
CCDC137ENSG00000185298.8407.34540241.231000.755704.445702.67380HepG2HNRNPA0
CCDC137ENSG00000185298.8384.01850235.547200.705104.096402.38410HepG2HNRNPAB
CCDC137ENSG00000185298.8506.12070305.048300.730305.793104.81810HepG2HNRNPC
CCDC137ENSG00000185298.8666.08540375.578400.826507.945006.80890HepG2HNRNPK
CCDC137ENSG00000185298.8749.13830535.643200.483904.457003.28160HepG2HNRNPM
CCDC137ENSG00000185298.8521.87110303.031200.784107.155706.21670HepG2HNRNPU
CCDC137ENSG00000185298.81038.97410376.725501.4635024.9927023.21370HepG2IGF2BP2
CCDC137ENSG00000185298.81061.74180353.697101.585707.040405.51210HepG2IGF2BP3
CCDC137ENSG00000185298.8473.39040309.535700.612806.945705.83720HepG2ILF2
CCDC137ENSG00000185298.8422.20630271.808000.635303.615502.22170HepG2KHDRBS1
CCDC137ENSG00000185298.81150.31250764.686200.589004.299903.25880HepG2LARP4
CCDC137ENSG00000185298.8554.04040322.115200.782304.968603.45030HepG2LARP7
CCDC137ENSG00000185298.8902.67860399.824801.1747015.4159013.92720HepG2MAGOH
CCDC137ENSG00000185298.8560.06060402.028800.478202.502801.90010HepG2MATR3
CCDC137ENSG00000185298.8446.87990691.75710-0.630403.293702.22940HepG2MTPAP
CCDC137ENSG00000185298.8843.06400411.471401.034807.766006.73060HepG2NCBP2
CCDC137ENSG00000185298.8853.62130504.877400.757605.493403.48730HepG2NKRF
CCDC137ENSG00000185298.8971.51370616.994800.654908.971807.62190HepG2NOL12
CCDC137ENSG00000185298.8439.61320260.610000.754203.377502.39090HepG2PABPC1
CCDC137ENSG00000185298.8606.24110366.316000.726705.212604.23310HepG2PABPC4
CCDC137ENSG00000185298.8491.83050299.943900.713407.551206.26240HepG2PARN
CCDC137ENSG00000185298.8753.13220386.947900.9607016.9217015.62630HepG2PCBP1
CCDC137ENSG00000185298.8357.74700270.278900.404402.379701.69100HepG2PPIL4
CCDC137ENSG00000185298.8654.96720393.720900.734109.306608.42060HepG2PTBP1
CCDC137ENSG00000185298.81187.48700625.219000.9254026.1302024.68360HepG2PUM1
CCDC137ENSG00000185298.81038.74530624.763800.733408.306707.17160HepG2PUM2
CCDC137ENSG00000185298.8840.95500580.018200.535807.373006.44820HepG2PUS1
CCDC137ENSG00000185298.81413.02460832.310100.7635015.0617014.05050HepG2RBM22
CCDC137ENSG00000185298.8750.52930388.446600.950106.432704.91180HepG2RBM27
CCDC137ENSG00000185298.8413.99630275.387100.588102.879901.30860HepG2RBM47
CCDC137ENSG00000185298.8698.77410315.438501.1474011.220209.13320HepG2RCC2
CCDC137ENSG00000185298.8721.01690438.184400.718408.921608.05170HepG2NELFE
CCDC137ENSG00000185298.8588.77200408.089500.528704.463303.70490HepG2RECQL
CCDC137ENSG00000185298.8561.74720333.891700.750407.080906.14850HepG2RPS19
CCDC137ENSG00000185298.8619.07620358.202000.789203.966203.01630HepG2RPS2
CCDC137ENSG00000185298.8467.79740286.423100.707604.182103.19840HepG2RPS3A
CCDC137ENSG00000185298.8689.90140365.699000.915606.888305.20750HepG2RPS5
CCDC137ENSG00000185298.8393.27550269.860300.543203.536202.82380HepG2SAFB2
CCDC137ENSG00000185298.8406.82740269.712500.592903.104001.71840HepG2SART3
CCDC137ENSG00000185298.81720.88890825.439801.0598012.6175011.11630HepG2SF3A3
CCDC137ENSG00000185298.8739.13670409.937800.8503012.4944011.37930HepG2SF3B4
CCDC137ENSG00000185298.8734.58880314.698601.2229027.8890026.19770HepG2SMN1
CCDC137ENSG00000185298.8585.45320352.756700.730804.053002.87510HepG2SMNDC1
CCDC137ENSG00000185298.81334.62690940.053000.505508.503207.75640HepG2SRFBP1
CCDC137ENSG00000185298.8611.79500427.876700.515804.792204.21340HepG2SRSF1
CCDC137ENSG00000185298.81043.63860581.522700.8436017.1368015.76680HepG2SRSF5
CCDC137ENSG00000185298.8458.79030348.092200.398302.862702.30360HepG2SRSF9
CCDC137ENSG00000185298.8764.84430530.994500.526403.502202.07330HepG2SSRP1
CCDC137ENSG00000185298.8462.97380249.214300.893406.730104.94880HepG2STIP1
CCDC137ENSG00000185298.81217.06820661.354000.8798022.0935020.60910HepG2SUCLG1
CCDC137ENSG00000185298.8619.33380294.435901.072706.469005.76420HepG2TIAL1
CCDC137ENSG00000185298.8937.83490575.398300.704708.670706.97250HepG2TUFM
CCDC137ENSG00000185298.81145.11790664.063600.786009.885608.68540HepG2U2AF1
CCDC137ENSG00000185298.8963.80720609.047500.662105.431904.23780HepG2UBE2L3
CCDC137ENSG00000185298.8533.19030289.389300.881505.754804.64940HepG2UCHL5
CCDC137ENSG00000185298.8900.06550732.038900.298002.891102.17940HepG2UPF1
CCDC137ENSG00000185298.81637.12970706.754701.2118043.3131041.35690HepG2UTP3
CCDC137ENSG00000185298.8643.49580379.568100.761504.673703.31330HepG2XRCC6
CCDC137ENSG00000185298.81051.43900805.102600.385005.321904.62550HepG2ZNF622
CCDC137ENSG00000185298.81174.19720940.421200.320202.326501.72630K562AKAP8L
CCDC137ENSG00000185298.81867.163501389.411000.426304.231503.53540K562AQR
CCDC137ENSG00000185298.81186.00280986.716500.265302.235901.42320K562ATP5C1
CCDC137ENSG00000185298.8460.05710601.18460-0.386002.144301.38270K562BOP1
CCDC137ENSG00000185298.8483.24660639.23480-0.403602.864202.06810K562CPSF6
CCDC137ENSG00000185298.81851.576802393.82290-0.370604.293503.06920K562CELF1
CCDC137ENSG00000185298.81789.717201451.267900.302303.783503.03850K562DDX47
CCDC137ENSG00000185298.81318.913701011.999200.382004.436103.28990K562DKC1
CCDC137ENSG00000185298.8588.70530363.453800.695707.159805.89210K562EIF3G
CCDC137ENSG00000185298.8804.04440633.763800.343202.144901.41750K562EIF4A3
CCDC137ENSG00000185298.81472.834301946.98410-0.402605.441404.14350K562EIF4G2
CCDC137ENSG00000185298.8437.29630667.65380-0.610504.639603.11370K562FKBP4
CCDC137ENSG00000185298.8482.35850650.40030-0.431202.756801.90470K562FMR1
CCDC137ENSG00000185298.81107.16410659.079800.7482012.7539011.55150K562FXR1
CCDC137ENSG00000185298.8104.07620271.05190-1.380907.961706.63710K562G3BP2
CCDC137ENSG00000185298.8604.22760768.65010-0.347202.358501.80140K562HNRNPC
CCDC137ENSG00000185298.8709.847101159.14400-0.707508.326106.95790K562HSPD1
CCDC137ENSG00000185298.8709.69020463.033100.616003.976002.65650K562IGF2BP2
CCDC137ENSG00000185298.8377.39720521.12590-0.465502.230901.40230K562KRR1
CCDC137ENSG00000185298.8814.90490486.240300.744909.069907.49540K562MAGOH
CCDC137ENSG00000185298.81244.734301507.04430-0.275903.985803.10930K562NSUN2
CCDC137ENSG00000185298.8601.795501090.20460-0.857309.476607.94560K562PCBP3
CCDC137ENSG00000185298.81607.921202000.57780-0.315203.004601.50650K562PNPT1
CCDC137ENSG00000185298.8539.78730836.24830-0.631507.256105.97440K562POLR2G
CCDC137ENSG00000185298.8847.36080472.442000.8427012.0303010.69780K562PTBP1
CCDC137ENSG00000185298.81090.49490908.723400.263002.042401.51880K562RBM15
CCDC137ENSG00000185298.8762.80580452.802700.752308.334906.76410K562RBM22
CCDC137ENSG00000185298.8427.44290281.614700.601904.760303.62770K562SF3B4
CCDC137ENSG00000185298.8811.68490463.194300.8092010.385709.03090K562SRSF1
CCDC137ENSG00000185298.8439.22310314.447600.482002.751401.70500K562SRSF4
CCDC137ENSG00000185298.8601.895901201.67470-0.997503.805801.50880K562SUGP2
CCDC137ENSG00000185298.8664.716501171.45140-0.817503.195101.62890K562SUPT6H
CCDC137ENSG00000185298.8120.51810266.05000-1.142403.727601.93430K562TAF15
CCDC137ENSG00000185298.81082.16890468.688701.2071020.3650018.09740K562TARDBP
CCDC137ENSG00000185298.8613.58540452.127900.440402.854402.02120K562TIA1
CCDC137ENSG00000185298.8411.99750704.36430-0.773708.089906.27330K562TRIM56
CCDC137ENSG00000185298.81454.878101774.12910-0.286203.330901.92930K562TROVE2
CCDC137ENSG00000185298.81148.215001597.94880-0.476808.522407.34560K562UPF1
CCDC137ENSG00000185298.81070.157201367.31800-0.353503.235802.29390K562WDR3
CCDC137ENSG00000185298.8669.779501152.56450-0.783103.141201.41940K562YTHDC2
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for CCDC137 is not available on ENCORE database.





1 RBPs can affect the splicing of CCDC137 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
A5SSCCDC137ENSG00000185298.8chr17+7963479879635011796347987963489279637259796374830.478000.000000.00000longerK562AQR

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for CCDC137 is not avaliable on ENCORE database.