CARD9

General Information

Gene Name       : CARD9
Gene ID             : ENSG00000187796.14
Essential Gene : No

Functions

Localization

Domains (AlphaFold: CARD9)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878CARD9ENSG00000187796.140.000.230.12ENCSR000AEF
HepG2CARD9ENSG00000187796.147.330.974.15ENCSR985KAT
K562CARD9ENSG00000187796.149.523.136.32ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for CARD9 is not avaliable on ENCORE database.



Proteins bound to RNA
  • CARD9 RNA is bound by 15 proteins.  







eCLIP assay for CARD9 is not avaliable on ENCORE database.





15 proteins are bound to CARD9 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr9139262049139262098-3'-UTR,CDS,intron-Distal,intron-Proximal3.607806.35344K562PRPF8
chr9139262039139262128-3'-UTR,CDS,intron-Distal,intron-Proximal4.8667711.50355HepG2PRPF8
chr9139258983139259048-3'-UTR,CDS,intron-Distal,intron-Proximal3.270004.77136HepG2PPIG
chr9139267836139268002-5'-UTR,intron-Distal6.8116324.09154K562AQR
chr9139266477139266552-5'-UTR,CDS,intron-Distal,intron-Proximal4.648475.24155K562BUD13
chr9139266523139266569-5'-UTR,CDS,intron-Distal,intron-Proximal4.041815.93840HepG2PRPF8
chr9139266508139266602-5'-UTR,CDS,intron-Distal,intron-Proximal4.682494.62947HepG2AQR
chr9139266503139266583-5'-UTR,CDS,intron-Distal,intron-Proximal7.0335425.73615K562AQR
chr9139267934139267995-5'-UTR,intron-Distal3.186465.48288K562PRPF8
chr9139266357139266418-CDS,intron-Distal3.436843.61259K562ZNF622
chr9139265319139265390-CDS,intron-Distal,intron-Proximal3.594933.01533HepG2SRSF1
chr9139265301139265424-CDS,intron-Distal,intron-Proximal3.409845.39086K562UCHL5
chr9139264201139264268-CDS,intron-Distal,intron-Proximal4.638325.24929K562ZNF622
chr9139265348139265435-CDS,intron-Distal,intron-Proximal3.385485.58370HepG2PPIG
chr9139264932139265004-CDS,intron-Distal,intron-Proximal4.2184910.32997HepG2PRPF8
chr9139266299139266347-intron-Distal,intron-Proximal4.932626.04760K562AQR
chr9139259303139259355-intron-Distal3.384434.64824K562PRPF8
chr9139260622139260786-intron-Distal4.646427.54112K562FUS
chr9139257598139257732-intron-Distal,intron-Proximal4.359904.06667K562GTF2F1
chr9139260528139260620-intron-Distal4.293625.31704K562FUS
chr9139257596139257768-intron-Distal,intron-Proximal3.844163.63122HepG2PRPF4
chr9139260970139261043-intron-Distal4.345824.50934HepG2RBFOX2
chr9139260960139261007-intron-Distal3.086453.01994K562BUD13
chr9139261737139261789-intron-Distal,intron-Proximal3.955943.56713HepG2SF3B4
chr9139260917139261022-intron-Distal3.983234.77857K562AKAP8L
chr9139260907139261060-intron-Distal4.760557.44648K562FUS
chr9139260240139260295-intron-Distal4.208693.90085K562MTPAP
chr9139267652139267690-intron-Distal3.366173.54718K562PRPF8
chr9139259272139259360-intron-Distal4.004293.96304K562CSTF2T
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for CARD9 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for CARD9 is not available on ENCORE database.

  • 114 RBPs can affect the levels of CARD9.  








The Knockdown/knockout RNA-Seq assay for CARD9 is not available on ENCORE database.





114 RBPs can affect the gene expression of CARD9 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
CARD9ENSG00000187796.9237.53580164.361600.531202.850002.23450HepG2ACO1
CARD9ENSG00000187796.9265.2222091.642201.533008.692406.99420HepG2BCCIP
CARD9ENSG00000187796.939.73680124.68150-1.649704.063503.35420HepG2BOP1
CARD9ENSG00000187796.9228.68680141.696800.690503.178401.99170HepG2CPSF7
CARD9ENSG00000187796.977.8234036.266201.101503.225302.12430HepG2YBX3
CARD9ENSG00000187796.9149.7094083.531800.841703.778603.04930HepG2CELF1
CARD9ENSG00000187796.9255.3308090.117001.502408.219106.96620HepG2DDX55
CARD9ENSG00000187796.9190.2542089.150501.093503.454002.77150HepG2DDX6
CARD9ENSG00000187796.9108.63850157.25960-0.533601.897201.31960HepG2DKC1
CARD9ENSG00000187796.9116.0692035.297401.717307.522406.51810HepG2DNAJC2
CARD9ENSG00000187796.9305.06960130.529101.2247010.224608.17230HepG2EIF2S2
CARD9ENSG00000187796.9268.3207092.161101.541602.648901.97520HepG2EIF4B
CARD9ENSG00000187796.9858.60200348.856901.2993028.5319026.94080HepG2ETF1
CARD9ENSG00000187796.9196.5989095.547801.040904.620403.74300HepG2FXR1
CARD9ENSG00000187796.972.9401036.088001.015102.391601.35500HepG2GRSF1
CARD9ENSG00000187796.968.8553035.949500.937502.025701.46260HepG2HNRNPA1
CARD9ENSG00000187796.9268.6707089.838401.580309.325608.10340HepG2HNRNPK
CARD9ENSG00000187796.9176.9898081.825301.112906.872705.85420HepG2HNRNPL
CARD9ENSG00000187796.938.47890123.79480-1.685804.698903.89990HepG2HNRNPLL
CARD9ENSG00000187796.991.4382039.723901.202704.494003.73790HepG2HNRNPU
CARD9ENSG00000187796.9171.5382094.569600.859003.288301.94260HepG2HSPD1
CARD9ENSG00000187796.9114.2729037.166101.620307.056105.05890HepG2KHDRBS1
CARD9ENSG00000187796.9275.81710143.677800.940805.076103.93740HepG2LARP4
CARD9ENSG00000187796.9232.4288096.096201.274107.225206.24130HepG2MATR3
CARD9ENSG00000187796.968.25210126.31040-0.888002.190801.33510HepG2MTPAP
CARD9ENSG00000187796.960.79890118.07920-0.957603.721802.31120HepG2NAA15
CARD9ENSG00000187796.9211.7242098.343101.106202.181901.61740HepG2NCBP2
CARD9ENSG00000187796.9171.9433089.613700.940003.938902.23390HepG2NKRF
CARD9ENSG00000187796.9214.4453082.819601.372505.308703.76890HepG2NONO
CARD9ENSG00000187796.959.95200109.78630-0.872802.101601.44600HepG2NSUN2
CARD9ENSG00000187796.9252.0762065.320401.9482021.4290019.99800HepG2PCBP1
CARD9ENSG00000187796.9108.7606035.430301.618008.009006.80350HepG2PPIL4
CARD9ENSG00000187796.9176.8727066.474501.411709.752708.84870HepG2PTBP1
CARD9ENSG00000187796.9146.0639085.022400.780601.869801.36620HepG2PUF60
CARD9ENSG00000187796.9308.0209090.252701.7709018.1597016.91020HepG2PUM1
CARD9ENSG00000187796.9111.81440167.41870-0.582402.502301.90850HepG2PUS1
CARD9ENSG00000187796.9163.7575079.018501.051204.481503.20110HepG2RBM27
CARD9ENSG00000187796.9124.0753064.166400.951203.154302.02010HepG2RCC2
CARD9ENSG00000187796.9193.1455073.972601.384508.941908.07080HepG2NELFE
CARD9ENSG00000187796.9155.8660068.908301.177506.203905.33180HepG2RECQL
CARD9ENSG00000187796.951.85900106.78260-1.042003.394302.64860HepG2RPLP0
CARD9ENSG00000187796.9161.5381072.876601.148205.190604.11480HepG2RPS2
CARD9ENSG00000187796.991.9308039.164501.230903.774202.83980HepG2RPS3A
CARD9ENSG00000187796.9140.0686074.390500.912803.356802.16950HepG2RPS5
CARD9ENSG00000187796.981.9269036.879501.151403.227601.82100HepG2SART3
CARD9ENSG00000187796.9253.6237069.193301.873907.843106.92850HepG2SF3B4
CARD9ENSG00000187796.9138.0140081.518500.759503.073702.33950HepG2SLBP
CARD9ENSG00000187796.9121.7562041.252301.561308.107207.09740HepG2SMN1
CARD9ENSG00000187796.9203.99600329.29960-0.690903.924703.35810HepG2SRFBP1
CARD9ENSG00000187796.963.08890131.87140-1.063702.510301.56040HepG2SRSF3
CARD9ENSG00000187796.9219.0701083.944501.3838011.2770010.12750HepG2SRSF5
CARD9ENSG00000187796.9149.6147058.767501.348108.372907.50510HepG2SRSF9
CARD9ENSG00000187796.975.29610285.87910-1.9248014.5837013.59350HepG2SSB
CARD9ENSG00000187796.993.6065034.076801.457702.388601.37740HepG2STIP1
CARD9ENSG00000187796.9246.2038095.470401.3666012.2780011.12650HepG2SUCLG1
CARD9ENSG00000187796.9173.2874038.944502.153607.571806.71620HepG2TRIM56
CARD9ENSG00000187796.9181.6930083.059501.129202.325701.53110HepG2TUFM
CARD9ENSG00000187796.9310.1901087.914701.818903.663102.69300HepG2UBE2L3
CARD9ENSG00000187796.9120.5320052.967401.186104.426603.46460HepG2UCHL5
CARD9ENSG00000187796.985.41050136.80480-0.679602.584501.90580HepG2UPF1
CARD9ENSG00000187796.947.58310126.68980-1.412807.433406.42090HepG2ZC3H8
CARD9ENSG00000187796.9443.51720737.81190-0.734308.558207.63350K562AGGF1
CARD9ENSG00000187796.9586.65590810.65240-0.466602.513301.58510K562AKAP8
CARD9ENSG00000187796.9482.73450767.70430-0.669307.019705.93990K562AKAP8L
CARD9ENSG00000187796.9404.07480838.66470-1.0535010.458909.42820K562AQR
CARD9ENSG00000187796.9492.82290805.46410-0.708808.644906.90380K562ATP5C1
CARD9ENSG00000187796.9505.42500337.032900.584503.424602.35140K562BCLAF1
CARD9ENSG00000187796.9110.80040204.11370-0.881404.119803.05200K562BOP1
CARD9ENSG00000187796.9352.50970505.52210-0.520103.692501.92600K562CEBPZ
CARD9ENSG00000187796.9273.86280556.54030-1.023006.661204.96850K562CNOT7
CARD9ENSG00000187796.9359.54750255.689800.491702.276801.33720K562CSTF2
CARD9ENSG00000187796.9773.058801195.63560-0.629108.910807.20390K562CELF1
CARD9ENSG00000187796.9287.26780603.29010-1.070505.371002.75390K562DAZAP1
CARD9ENSG00000187796.9602.78150865.65360-0.522203.217501.63520K562DDX19B
CARD9ENSG00000187796.91001.86930581.238700.7854014.7433013.35400K562DDX47
CARD9ENSG00000187796.9377.29070234.031600.688903.661502.59930K562EFTUD2
CARD9ENSG00000187796.91316.56700531.091901.3096024.3092022.53020K562EIF2S2
CARD9ENSG00000187796.9483.49510327.089000.563702.406701.47500K562EIF3A
CARD9ENSG00000187796.9159.16990335.85150-1.077302.751701.93330K562EIF4A3
CARD9ENSG00000187796.9233.12750317.32940-0.444902.114001.36900K562FIP1L1
CARD9ENSG00000187796.9125.92150250.25530-0.990903.612902.29840K562FKBP4
CARD9ENSG00000187796.9125.90680220.83360-0.810604.139503.09010K562FMR1
CARD9ENSG00000187796.982.86960154.84310-0.901904.296302.58150K562FUS
CARD9ENSG00000187796.97.7337052.07790-2.751407.040405.79820K562G3BP2
CARD9ENSG00000187796.9302.66310521.30430-0.784403.818301.52160K562HLTF
CARD9ENSG00000187796.9175.67670288.02380-0.713304.133703.41900K562HNRNPC
CARD9ENSG00000187796.9150.83530261.01880-0.791204.010902.87560K562HNRNPM
CARD9ENSG00000187796.9690.35200430.216100.682202.533401.76850K562HSPD1
CARD9ENSG00000187796.9260.51440149.409700.802002.546601.57530K562IGF2BP2
CARD9ENSG00000187796.9245.07010507.79490-1.051105.000803.04780K562ILF2
CARD9ENSG00000187796.9217.41400335.97790-0.627903.461001.78580K562ILF3
CARD9ENSG00000187796.9419.93550814.80490-0.9563011.746209.66480K562KIF1C
CARD9ENSG00000187796.988.75160176.93890-0.995403.992502.85440K562KRR1
CARD9ENSG00000187796.9386.31890256.956400.588203.559001.76520K562LSM11
CARD9ENSG00000187796.9327.05660156.394901.064204.814303.56200K562MATR3
CARD9ENSG00000187796.9620.629201036.34720-0.739704.593303.13320K562MSI2
CARD9ENSG00000187796.9407.29920574.98100-0.497404.499403.48960K562MTPAP
CARD9ENSG00000187796.9284.20760639.78310-1.170605.470904.08100K562NAA15
CARD9ENSG00000187796.9171.34490335.42750-0.969102.783601.55110K562NCBP2
CARD9ENSG00000187796.9749.808601063.57410-0.504304.489502.56000K562NOL12
CARD9ENSG00000187796.9439.32370283.673800.631002.805201.37370K562NUSAP1
CARD9ENSG00000187796.9245.50480381.92650-0.637503.469602.53740K562PCBP3
CARD9ENSG00000187796.9319.07070585.18720-0.875004.688802.30440K562PRPF6
CARD9ENSG00000187796.9498.73000258.259300.949309.092507.25440K562PSIP1
CARD9ENSG00000187796.9245.39090152.316400.687902.012501.42940K562PTBP1
CARD9ENSG00000187796.9697.470201060.82870-0.605005.412804.27420K562PUF60
CARD9ENSG00000187796.9795.120601128.47700-0.505105.629404.06320K562PUM1
CARD9ENSG00000187796.9218.80200761.51280-1.7992026.4143024.73230K562PUS1
CARD9ENSG00000187796.9332.37780741.84620-1.1583014.4059013.04400K562RBM15
CARD9ENSG00000187796.9289.87030145.905900.990304.750303.61550K562RBM22
CARD9ENSG00000187796.9217.00700110.626400.971904.425003.12100K562RPS3
CARD9ENSG00000187796.9108.29330197.07810-0.863803.623102.50290K562SF3B1
CARD9ENSG00000187796.9104.6287054.188200.949103.570302.59430K562SF3B4
CARD9ENSG00000187796.996.65100179.42790-0.892504.683802.38490K562SLTM
CARD9ENSG00000187796.9215.15350106.799901.010405.319603.77300K562SRSF4
CARD9ENSG00000187796.9302.07320141.125901.097802.920701.83910K562SRSF5
CARD9ENSG00000187796.9381.02870518.39150-0.444103.217601.94940K562SRSF7
CARD9ENSG00000187796.9115.31770180.66400-0.647702.737201.46960K562SSB
CARD9ENSG00000187796.9293.16330416.34030-0.506102.764401.40690K562SSRP1
CARD9ENSG00000187796.911.8622051.12370-2.107604.705802.62110K562TAF15
CARD9ENSG00000187796.9401.27860151.087901.409106.939005.76880K562TARDBP
CARD9ENSG00000187796.9408.39030145.758501.4863015.4132013.35400K562TIA1
CARD9ENSG00000187796.9142.71060248.39300-0.799504.116302.95520K562TIAL1
CARD9ENSG00000187796.9642.61650964.80280-0.586304.755003.08590K562TROVE2
CARD9ENSG00000187796.922.7237052.16410-1.198902.642601.85640K562U2AF2
CARD9ENSG00000187796.9423.26890677.36300-0.678409.104807.89470K562UPF1
CARD9ENSG00000187796.9364.86350771.93190-1.081106.460604.28290K562UTP18
CARD9ENSG00000187796.9344.70130579.59420-0.749707.656406.15930K562WDR3
CARD9ENSG00000187796.9393.94610602.73710-0.613507.363306.04500K562WDR43
CARD9ENSG00000187796.9358.71200237.681200.593702.591901.43560K562XRN2
CARD9ENSG00000187796.9661.13670944.90380-0.515203.495002.50590K562ZC3H8
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for CARD9 is not available on ENCORE database.





5 RBPs can affect the splicing of CARD9 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SECARD9ENSG00000187796.9chr9-139259592139259669139258934139259011139261251139261297-0.409000.003440.07943excludedK562AKAP8L
A3SSCARD9ENSG00000187796.9chr9-1392622051392624281392622051392622801392642011392643270.236000.003320.02014longerK562AQR
A3SSCARD9ENSG00000187796.9chr9-1392657751392659341392657751392659131392663461392664220.067000.005430.03108longerK562AQR
A3SSCARD9ENSG00000187796.9chr9-1392620881392624281392620881392622801392642011392643270.653000.001580.09763longerHepG2SF3B4
RICARD9ENSG00000187796.9chr9-1392589341392596691392589341392590111392595921392596690.440000.016490.08610includedK562PUS1
RICARD9ENSG00000187796.9chr9-139258934139261297139258934139259669139261251139261297-0.714000.000250.02887excludedK562AARS
RICARD9ENSG00000187796.9chr9-1392616671392624281392616671392617091392620881392624280.183000.019460.09640includedK562AQR

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for CARD9 is not avaliable on ENCORE database.