TADA3

General Information

Gene Name       : TADA3
Gene ID             : ENSG00000171148.13
Essential Gene : Yes

Functions

Localization

Domains (AlphaFold: TADA3)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878TADA3ENSG00000171148.1316.4433.9025.17ENCSR000AEF
HepG2TADA3ENSG00000171148.1341.1630.2235.69ENCSR985KAT
K562TADA3ENSG00000171148.1374.3165.7570.03ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for TADA3 is not avaliable on ENCORE database.



Proteins bound to RNA
  • TADA3 RNA is bound by 11 proteins.  







eCLIP assay for TADA3 is not avaliable on ENCORE database.





11 proteins are bound to TADA3 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr398216679821807-3'-UTR,intron-Distal3.097858.23088K562PABPC4
chr398217069821854-3'-UTR,intron-Distal,intron-Proximal3.620274.68791K562PCBP1
chr398216999821772-3'-UTR,intron-Distal5.5343633.07450HepG2PCBP2
chr398219079822011-3'-UTR,intron-Distal,intron-Proximal4.189874.30948K562LIN28B
chr398216889821830-3'-UTR,intron-Distal3.766393.01032HepG2LARP4
chr398339889834079-5'-UTR,intron-Distal4.1542115.71611K562DDX3X
chr398331549833178-5'-UTR,intron-Distal,intron-Proximal4.050094.12025K562YBX3
chr398340079834125-5'-UTR,intron-Distal,intron-Proximal5.1260121.60578HepG2DDX3X
chr398338999833948-5'-UTR,intron-Distal4.591766.09204K562YBX3
chr398286659828739-CDS,intron-Distal,intron-Proximal3.257136.74268HepG2PRPF8
chr398287439828791-CDS,intron-Distal,intron-Proximal4.752895.27053HepG2PPIG
chr398315589831613-CDS,intron-Distal,intron-Proximal4.292815.16762K562YBX3
chr398257749825855-CDS,intron-Distal3.727944.68902HepG2PPIG
chr398258569825894-CDS,intron-Distal3.960243.66655K562YBX3
chr398286869828743-CDS,intron-Distal,intron-Proximal3.495615.47500HepG2PPIG
chr398312789831364-CDS,intron-Distal,intron-Proximal4.683225.80027HepG2SF3B4
chr398257679825840-CDS,intron-Distal4.076284.04622HepG2GRWD1
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for TADA3 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for TADA3 is not available on ENCORE database.

  • 77 RBPs can affect the levels of TADA3.  








The Knockdown/knockout RNA-Seq assay for TADA3 is not available on ENCORE database.





77 RBPs can affect the gene expression of TADA3 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
TADA3ENSG00000171148.91490.461101227.516200.279903.448102.78190HepG2ACO1
TADA3ENSG00000171148.92329.914601648.402000.499103.762803.15580HepG2AKAP1
TADA3ENSG00000171148.91036.617401363.80900-0.395802.253701.54140HepG2ASCC1
TADA3ENSG00000171148.9892.110901184.44590-0.408903.354402.51550HepG2CALR
TADA3ENSG00000171148.9883.319401182.08090-0.420303.261702.52100HepG2CPSF6
TADA3ENSG00000171148.91618.481301275.272200.343704.272003.50500HepG2CELF1
TADA3ENSG00000171148.91322.348501135.283500.219902.318501.55030HepG2DDX19B
TADA3ENSG00000171148.91104.63320909.801900.279802.509301.83540HepG2DNAJC21
TADA3ENSG00000171148.91129.93320901.784400.325304.126303.36120HepG2DNAJC2
TADA3ENSG00000171148.9487.13100686.57220-0.495102.848301.72350HepG2AGO1
TADA3ENSG00000171148.91127.05360818.704700.461003.345102.35580HepG2EIF3D
TADA3ENSG00000171148.9486.613101184.15190-1.283007.586405.91050HepG2FTO
TADA3ENSG00000171148.91879.872801454.238800.370302.728802.04220HepG2FXR1
TADA3ENSG00000171148.91198.23040897.300300.417102.680301.67920HepG2GNB2L1
TADA3ENSG00000171148.91061.106301339.92170-0.336602.079201.52030HepG2GPKOW
TADA3ENSG00000171148.91587.283901345.605000.238202.489101.80730HepG2HNRNPF
TADA3ENSG00000171148.9980.010201278.71730-0.383802.840902.20410HepG2HNRNPLL
TADA3ENSG00000171148.9921.555301216.94480-0.401104.049302.91800HepG2HNRNPM
TADA3ENSG00000171148.91309.677501014.932000.367704.739103.96300HepG2HNRNPU
TADA3ENSG00000171148.91609.608401325.038000.280602.456701.77280HepG2IGF2BP1
TADA3ENSG00000171148.91217.421901036.718500.231702.451801.75740HepG2ILF2
TADA3ENSG00000171148.91803.324001359.701200.407305.176504.13860HepG2NOL12
TADA3ENSG00000171148.9760.937201133.87040-0.575405.491404.45480HepG2NSUN2
TADA3ENSG00000171148.91193.834301004.602100.248902.295001.51760HepG2PARN
TADA3ENSG00000171148.9920.29170677.062500.442704.218502.68890HepG2PKM
TADA3ENSG00000171148.91075.42870905.237300.248402.020701.38190HepG2PPIL4
TADA3ENSG00000171148.9764.699001318.55820-0.7860017.4591015.79500HepG2PRPF4
TADA3ENSG00000171148.91707.779801377.840700.309604.947304.20120HepG2PUM1
TADA3ENSG00000171148.91436.929201760.33310-0.292903.055102.51850HepG2RBM22
TADA3ENSG00000171148.91084.661601301.56720-0.263001.880501.31530HepG2RBM25
TADA3ENSG00000171148.91012.08520796.714600.345102.576401.98170HepG2RPS19
TADA3ENSG00000171148.91245.28550977.783200.348802.170301.45680HepG2RPS2
TADA3ENSG00000171148.9525.79820738.56900-0.490202.509601.75730HepG2RRP9
TADA3ENSG00000171148.91094.70390903.838600.276302.900402.24450HepG2SAFB2
TADA3ENSG00000171148.9509.970701408.26250-1.4654017.6710015.74200HepG2SNRNP70
TADA3ENSG00000171148.91611.942401281.546100.330804.331603.57940HepG2SRSF5
TADA3ENSG00000171148.91447.550501726.23200-0.254003.009302.47930HepG2SSB
TADA3ENSG00000171148.91871.454901457.468100.360605.176604.37130HepG2SUCLG1
TADA3ENSG00000171148.9788.765401293.50690-0.7136012.3238011.26960HepG2TAF15
TADA3ENSG00000171148.9884.269501246.51030-0.495304.678203.76940HepG2TARDBP
TADA3ENSG00000171148.91155.03640995.013300.215101.896601.41220HepG2TRIM56
TADA3ENSG00000171148.92861.046003230.82810-0.175402.019701.52020K562AGGF1
TADA3ENSG00000171148.92733.687103361.79200-0.298402.736702.08750K562AKAP8L
TADA3ENSG00000171148.92053.708103340.13920-0.7017010.996809.94060K562AQR
TADA3ENSG00000171148.91464.735202084.04600-0.508705.302704.08390K562BOP1
TADA3ENSG00000171148.93964.786005007.48670-0.336804.590203.32340K562CELF1
TADA3ENSG00000171148.92728.093703212.64750-0.235903.037602.35840K562DDX47
TADA3ENSG00000171148.93334.502602604.011600.356605.690404.71400K562EIF2S2
TADA3ENSG00000171148.91332.485801611.79160-0.274502.073501.35920K562EIF4A3
TADA3ENSG00000171148.91737.684301406.886700.304602.960801.61430K562EWSR1
TADA3ENSG00000171148.93370.090602297.551600.552607.472606.01560K562FIP1L1
TADA3ENSG00000171148.91747.603002254.74520-0.367603.207202.28100K562FMR1
TADA3ENSG00000171148.91302.606801911.17320-0.553105.481404.14210K562FTO
TADA3ENSG00000171148.9268.50450727.23680-1.4375017.0799014.94070K562G3BP2
TADA3ENSG00000171148.92235.295002630.73430-0.235002.435001.37050K562GLRX3
TADA3ENSG00000171148.92283.554303842.28070-0.750702.558901.40030K562HNRNPA2B1
TADA3ENSG00000171148.91772.477602093.70150-0.240301.921101.41210K562HNRNPC
TADA3ENSG00000171148.93559.621804340.90570-0.286302.420601.36700K562MSI2
TADA3ENSG00000171148.91847.532502765.87570-0.5821015.5529013.83750K562MTPAP
TADA3ENSG00000171148.91980.599102801.48140-0.500303.820802.73920K562NAA15
TADA3ENSG00000171148.92729.855003073.12670-0.170902.643101.91090K562NSUN2
TADA3ENSG00000171148.93266.339102608.298000.324502.887802.04800K562PPIG
TADA3ENSG00000171148.93973.226604726.29800-0.250402.826401.74630K562PUM1
TADA3ENSG00000171148.92207.483603334.19770-0.594906.386805.60110K562PUS1
TADA3ENSG00000171148.92749.459503248.48900-0.240602.651102.06930K562RBM15
TADA3ENSG00000171148.91895.388001446.299400.390003.180801.65720K562RBM34
TADA3ENSG00000171148.92648.243501713.170200.6283011.064209.05810K562RCC2
TADA3ENSG00000171148.91817.287501241.106700.550103.636602.46990K562RPS3
TADA3ENSG00000171148.92156.495903032.40610-0.4918010.137008.64760K562SF3A3
TADA3ENSG00000171148.91479.846902012.19170-0.443303.456302.36560K562SF3B1
TADA3ENSG00000171148.92008.216001624.000600.306302.361301.43200K562SRFBP1
TADA3ENSG00000171148.91637.537501197.828600.451002.740601.69730K562SRSF4
TADA3ENSG00000171148.91775.891801433.049200.309402.289401.35000K562SRSF5
TADA3ENSG00000171148.92401.954803014.40810-0.327702.800901.43350K562SSRP1
TADA3ENSG00000171148.92138.423004225.55420-0.982603.497801.83000K562SUPT6H
TADA3ENSG00000171148.92252.806501535.162900.553205.895804.83650K562TARDBP
TADA3ENSG00000171148.92170.256601480.899600.551306.226004.92690K562TIA1
TADA3ENSG00000171148.92353.855301805.603800.382403.041702.05560K562TIAL1
TADA3ENSG00000171148.91906.080001453.757400.390703.669902.38050K562TRA2A
TADA3ENSG00000171148.9574.76420727.92360-0.340802.523401.75630K562U2AF2
TADA3ENSG00000171148.92858.079903258.50220-0.189202.339401.67580K562UPF1
TADA3ENSG00000171148.92356.365402788.19620-0.242802.057701.30470K562WDR3
TADA3ENSG00000171148.93080.988703957.22570-0.361104.205902.60410K562WRN
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for TADA3 is not available on ENCORE database.





9 RBPs can affect the splicing of TADA3 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SETADA3ENSG00000171148.9chr3-982699998271099821939982223398286899828793-0.126000.000650.01466excludedK562SRSF1
SETADA3ENSG00000171148.9chr3-982699998271099825711982589798286899828793-0.058000.000000.00006excludedK562AQR
MXETADA3ENSG00000171148.9chr3-98257119825897982699998271099821543982223398286899828793-0.185000.000200.010002includedK562XRN2
MXETADA3ENSG00000171148.9chr3-98257119825897982699998271099821543982223398286899828793-0.142000.000950.018532includedK562SRSF1
MXETADA3ENSG00000171148.9chr3-98257119825897982699998271099821543982223398286899828793-0.149000.000140.005642includedK562TARDBP
MXETADA3ENSG00000171148.9chr3-982571198258979826999982710998216509822233982868998287930.201000.000010.001691includedK562SAFB
MXETADA3ENSG00000171148.9chr3-98257119825897982699998271099821543982223398286899828793-0.145000.000500.042692includedK562RBM22
MXETADA3ENSG00000171148.9chr3-98257119825897982699998271099821650982223398286899828793-0.174000.001670.049012includedHepG2HNRNPU
MXETADA3ENSG00000171148.9chr3-98257119825897982699998271099821650982223398286899828793-0.197000.001480.041812includedHepG2TIAL1
MXETADA3ENSG00000171148.9chr3-98257119825897982699998271099821543982223398286899828793-0.174000.000680.095442includedK562GEMIN5

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for TADA3 is not avaliable on ENCORE database.