SLMO2

General Information

Gene Name       : SLMO2
Gene ID             :
Essential Gene : No

Functions

Localization

Domains (AlphaFold: SLMO2)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for SLMO2 is not avaliable on ENCORE database.



Proteins bound to RNA
  • SLMO2 RNA is bound by 9 proteins.  







eCLIP assay for SLMO2 is not avaliable on ENCORE database.





9 proteins are bound to SLMO2 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr205760989857609947-3'-UTR,intron-Distal,intron-Proximal3.056913.70826K562FAM120A
chr205761175957611774-3'-UTR,CDS,intron-Distal3.858224.91258K562YBX3
chr205760868257608708-3'-UTR,intron-Distal4.7220533.02656K562PUM2
chr205760870857608753-3'-UTR,intron-Distal3.7980515.23786K562PUM2
chr205760866457608682-3'-UTR,intron-Distal4.9585716.18091K562PUM2
chr205761211557612248-3'-UTR,CDS,intron-Distal,intron-Proximal4.029188.82110K562PRPF8
chr205761174457611759-3'-UTR,CDS,intron-Distal,intron-Proximal3.467564.08171K562YBX3
chr205760988157609947-3'-UTR,intron-Distal,intron-Proximal3.409273.94854K562ZC3H11A
chr205761152557611625-3'-UTR,CDS,intron-Distal,intron-Proximal3.530343.68471HepG2BCLAF1
chr205760978257609821-3'-UTR,intron-Distal3.277324.47973K562YBX3
chr205760921757609255-3'-UTR,intron-Distal3.275424.30677K562YBX3
chr205761152757611554-3'-UTR,CDS,intron-Distal3.360977.18470K562YBX3
chr205761780457617867-5'-UTR,intron-Distal,intron-Proximal5.0144919.55003K562DDX3X
chr205761776057617804-5'-UTR,CDS,intron-Distal,intron-Proximal3.9307319.67855K562DDX3X
chr205761774957617888-5'-UTR,CDS,intron-Distal,intron-Proximal5.301437.46114HepG2DDX3X
chr205761364657613689-CDS,intron-Distal3.8075113.26683K562YBX3
chr205761768757617760-CDS,intron-Distal3.832206.65114HepG2PRPF8
chr205761142057611486-intron-Distal,intron-Proximal4.252913.12843K562PRPF8
chr205761767357617754-intron-Distal5.7041210.44569K562AQR
chr205761185357611976-intron-Distal,intron-Proximal3.975333.89294K562KHSRP
chr205761215857612246-intron-Distal,intron-Proximal5.6122710.04245K562AQR
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for SLMO2 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for SLMO2 is not available on ENCORE database.

  • 93 RBPs can affect the levels of SLMO2.  








The Knockdown/knockout RNA-Seq assay for SLMO2 is not available on ENCORE database.





93 RBPs can affect the gene expression of SLMO2 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
SLMO2ENSG00000101166.11338.47550492.77230-0.541904.923103.92610HepG2AKAP8L
SLMO2ENSG00000101166.11501.23330792.62660-0.661209.327608.19080HepG2AUH
SLMO2ENSG00000101166.11265.49310522.66650-0.977205.494404.15850HepG2BCCIP
SLMO2ENSG00000101166.11592.36620839.69600-0.503402.862301.86940HepG2CCAR1
SLMO2ENSG00000101166.11371.97570490.35980-0.398603.210902.50420HepG2CKAP4
SLMO2ENSG00000101166.11379.39870564.67000-0.573702.699501.94460HepG2CNOT7
SLMO2ENSG00000101166.11344.69380497.93030-0.530603.239402.50180HepG2CPSF6
SLMO2ENSG00000101166.11347.25030502.06800-0.531903.748002.61380HepG2DHX30
SLMO2ENSG00000101166.11334.29760469.24980-0.489203.804303.03430HepG2DKC1
SLMO2ENSG00000101166.11315.48220515.98990-0.709804.586103.78280HepG2DNAJC2
SLMO2ENSG00000101166.11504.89190646.38350-0.356401.848901.35200HepG2EIF2S1
SLMO2ENSG00000101166.11269.37090714.37660-1.4071017.7544016.14700HepG2EIF4A3
SLMO2ENSG00000101166.11553.97250698.45060-0.334302.066801.35510HepG2EIF4G2
SLMO2ENSG00000101166.11307.31770668.56850-1.1213012.3542011.00180HepG2G3BP1
SLMO2ENSG00000101166.11525.83070709.67370-0.432602.686201.81080HepG2G3BP2
SLMO2ENSG00000101166.11351.31620525.52300-0.581004.316803.53370HepG2HNRNPA1
SLMO2ENSG00000101166.11347.95820584.56400-0.748406.552305.52220HepG2HNRNPC
SLMO2ENSG00000101166.11340.38040550.43450-0.693407.640206.52790HepG2HNRNPF
SLMO2ENSG00000101166.11558.62940673.39050-0.269601.972201.39120HepG2HNRNPL
SLMO2ENSG00000101166.11203.67840580.69800-1.5115030.4728028.64570HepG2HNRNPU
SLMO2ENSG00000101166.11353.62350542.02420-0.616105.204804.24440HepG2IGF2BP1
SLMO2ENSG00000101166.11351.69770679.61180-0.950409.906508.71460HepG2IGF2BP2
SLMO2ENSG00000101166.11477.16990593.16090-0.313902.488501.78930HepG2ILF2
SLMO2ENSG00000101166.11321.27190506.87350-0.657802.837901.60850HepG2LIN28B
SLMO2ENSG00000101166.11465.96790720.88520-0.629504.836803.97670HepG2MAGOH
SLMO2ENSG00000101166.11426.30800742.03820-0.799607.132306.13800HepG2NCBP2
SLMO2ENSG00000101166.11350.36780516.04760-0.558602.381501.56980HepG2PABPC1
SLMO2ENSG00000101166.11458.56350630.92840-0.460404.503603.76110HepG2PCBP1
SLMO2ENSG00000101166.11405.71330517.93330-0.352301.945601.31890HepG2PPIL4
SLMO2ENSG00000101166.11365.75530498.92660-0.447903.445302.59180HepG2PRPF4
SLMO2ENSG00000101166.11519.95380641.96570-0.304102.321801.81250HepG2PTBP1
SLMO2ENSG00000101166.11515.40980699.62400-0.440903.607402.93820HepG2PUF60
SLMO2ENSG00000101166.11510.09250631.02860-0.306901.881801.31620HepG2RBM25
SLMO2ENSG00000101166.11483.79990665.38920-0.459804.432403.67550HepG2RECQL
SLMO2ENSG00000101166.11357.25980592.90260-0.730806.585805.59570HepG2RPLP0
SLMO2ENSG00000101166.11394.99950517.12730-0.388703.053702.38290HepG2SAFB2
SLMO2ENSG00000101166.11261.73710361.26260-0.464902.245501.39470HepG2SERBP1
SLMO2ENSG00000101166.11330.09130664.98940-1.010502.969601.55860HepG2SF1
SLMO2ENSG00000101166.11488.52270670.71060-0.457302.828602.11920HepG2SLBP
SLMO2ENSG00000101166.11445.12600603.04100-0.438004.407003.62890HepG2SMN1
SLMO2ENSG00000101166.11373.14370510.22890-0.451402.163501.32720HepG2SMNDC1
SLMO2ENSG00000101166.111035.76610859.103000.269702.602802.11100HepG2SRFBP1
SLMO2ENSG00000101166.11910.00050697.664100.383203.736103.20760HepG2SRSF1
SLMO2ENSG00000101166.11527.51970690.70690-0.388803.813003.09930HepG2SRSF5
SLMO2ENSG00000101166.11360.54860540.77210-0.584805.831704.88190HepG2SRSF7
SLMO2ENSG00000101166.11687.79750567.569500.277102.027101.54020HepG2SRSF9
SLMO2ENSG00000101166.11486.21770745.89790-0.617408.326007.52980HepG2SSB
SLMO2ENSG00000101166.11665.61790467.822100.508602.448801.32070HepG2SUB1
SLMO2ENSG00000101166.11178.78860393.32710-1.1375011.551909.75190HepG2SUPT6H
SLMO2ENSG00000101166.11356.25190576.21620-0.693707.184405.84950HepG2TIA1
SLMO2ENSG00000101166.11371.37020564.19320-0.603305.675105.00900HepG2TIAL1
SLMO2ENSG00000101166.11343.58000569.30470-0.728609.228808.29160HepG2TRIM56
SLMO2ENSG00000101166.11150.52510302.25150-1.005706.069904.93650HepG2UCHL5
SLMO2ENSG00000101166.11334.47380481.80830-0.526604.754103.88090HepG2UPF1
SLMO2ENSG00000101166.11254.82590468.61180-0.878904.140302.90070HepG2UPF2
SLMO2ENSG00000101166.11702.34260492.209900.512802.614101.39300HepG2XRCC5
SLMO2ENSG00000101166.11788.84820550.502200.518902.867901.79120HepG2XRCC6
SLMO2ENSG00000101166.11282.19460503.60290-0.835604.465503.55200HepG2XRN2
SLMO2ENSG00000101166.11345.54190492.34520-0.510804.527403.70210HepG2ZC3H8
SLMO2ENSG00000101166.113250.324104022.11100-0.307402.595201.41990K562ABCF1
SLMO2ENSG00000101166.112759.148303872.69100-0.489106.456505.62140K562AQR
SLMO2ENSG00000101166.111789.179302301.29650-0.363105.101303.21970K562BCCIP
SLMO2ENSG00000101166.111824.344802223.83090-0.285703.998602.82850K562BCLAF1
SLMO2ENSG00000101166.111769.868802287.62920-0.370203.186202.24930K562BOP1
SLMO2ENSG00000101166.112168.010302801.72320-0.369902.845001.40430K562BUD13
SLMO2ENSG00000101166.11839.951801130.51220-0.428603.577102.34470K562CCAR1
SLMO2ENSG00000101166.112632.259203596.58000-0.450308.754206.77770K562CPEB4
SLMO2ENSG00000101166.111038.158702432.31800-1.2283035.6543032.89280K562CPSF6
SLMO2ENSG00000101166.111327.188701687.10700-0.346203.995302.69540K562CSTF2
SLMO2ENSG00000101166.114487.066103721.673000.269704.351403.55990K562DDX47
SLMO2ENSG00000101166.114051.122703364.307600.267903.416302.42880K562DKC1
SLMO2ENSG00000101166.111366.417301826.88210-0.419003.540802.50070K562EFTUD2
SLMO2ENSG00000101166.111646.166002805.95450-0.7694013.2380011.84690K562EIF2S2
SLMO2ENSG00000101166.111293.309701902.99030-0.557206.943005.65100K562EIF4A3
SLMO2ENSG00000101166.113843.834904654.25320-0.276003.777402.68210K562EIF4G2
SLMO2ENSG00000101166.112286.414802891.43570-0.338703.011802.12420K562FIP1L1
SLMO2ENSG00000101166.111702.543902474.99650-0.539706.327105.01530K562FMR1
SLMO2ENSG00000101166.111372.573802097.85690-0.612006.861805.35380K562FTO
SLMO2ENSG00000101166.112448.287901979.030900.306904.102003.38670K562FXR1
SLMO2ENSG00000101166.112886.819102270.660100.346302.053201.45730K562G3BP2
SLMO2ENSG00000101166.111658.722102322.19460-0.485405.885504.73100K562GPKOW
SLMO2ENSG00000101166.112583.443403739.49610-0.533506.215405.07680K562GRSF1
SLMO2ENSG00000101166.111031.103302062.89210-1.0005018.2958016.84610K562HNRNPC
SLMO2ENSG00000101166.111242.103501841.93120-0.568407.400905.46540K562HNRNPF
SLMO2ENSG00000101166.111709.637102754.75580-0.6882013.9489012.00280K562HNRNPU
SLMO2ENSG00000101166.111391.470601983.04940-0.511103.647102.55840K562KRR1
SLMO2ENSG00000101166.112050.772202669.46350-0.380404.162203.12650K562MAGOH
SLMO2ENSG00000101166.111256.184502266.75090-0.8516016.4329014.20580K562METAP2
SLMO2ENSG00000101166.112186.531404960.97660-1.1820031.4729028.30630K562MSI2
SLMO2ENSG00000101166.111667.024202658.92540-0.6736020.3322018.43190K562MTPAP
SLMO2ENSG00000101166.112269.099802954.46280-0.380808.621307.40700K562NSUN2
SLMO2ENSG00000101166.111579.932602299.58620-0.541505.401504.23360K562PCBP3
SLMO2ENSG00000101166.111274.991101763.92030-0.468305.737704.58670K562POLR2G
SLMO2ENSG00000101166.111115.567701849.53370-0.729406.863105.32540K562PSIP1
SLMO2ENSG00000101166.112129.458902593.51750-0.284402.735602.07470K562PTBP1
SLMO2ENSG00000101166.114259.910405292.30890-0.313104.888503.60120K562PUM2
SLMO2ENSG00000101166.113826.453703100.657300.303302.338501.83060K562PUS1
SLMO2ENSG00000101166.111741.553902487.11880-0.514106.207404.88390K562RBM22
SLMO2ENSG00000101166.111392.557601687.14620-0.276802.337801.43080K562RCC2
SLMO2ENSG00000101166.112156.379002915.06600-0.434908.078906.74530K562SF3A3
SLMO2ENSG00000101166.11938.091601245.27580-0.408703.424102.00230K562SLBP
SLMO2ENSG00000101166.111283.039901599.40200-0.318002.431101.48590K562SRFBP1
SLMO2ENSG00000101166.112343.876602986.52680-0.349607.150505.72020K562SRPK2
SLMO2ENSG00000101166.111963.421002401.03860-0.290302.313801.36820K562SRSF5
SLMO2ENSG00000101166.111766.409702093.46750-0.245102.895401.69730K562SRSF7
SLMO2ENSG00000101166.112300.799501769.176100.379002.804501.97950K562SYNCRIP
SLMO2ENSG00000101166.111621.003102573.24540-0.666709.036807.66040K562TARDBP
SLMO2ENSG00000101166.111547.990002482.15720-0.6812012.5075010.65370K562TIA1
SLMO2ENSG00000101166.111356.912901778.98020-0.390702.968201.99600K562TIAL1
SLMO2ENSG00000101166.111478.408201889.58630-0.354003.008802.01440K562TRIM56
SLMO2ENSG00000101166.112670.111003381.77830-0.340902.840501.43400K562TRIP6
SLMO2ENSG00000101166.111150.038501821.94980-0.663807.324905.59430K562UCHL5
SLMO2ENSG00000101166.11812.338303132.66700-1.9472095.2128092.18540K562UPF1
SLMO2ENSG00000101166.112272.170702680.54460-0.238502.057801.30470K562WDR3
SLMO2ENSG00000101166.113447.974804362.80950-0.339503.501502.51040K562ZC3H8
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for SLMO2 is not available on ENCORE database.





26 RBPs can affect the splicing of SLMO2 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SESLMO2ENSG00000101166.11chr20-5761224557612335576117445761181557613520576136890.094000.000000.00000includedK562SRSF1
SESLMO2ENSG00000101166.11chr20-576122455761233557611744576118155761352057613689-0.423000.000000.00000excludedK562SF3B4
SESLMO2ENSG00000101166.11chr20-576122455761233557611744576118155761352057613689-0.118000.000000.00114excludedK562SMNDC1
SESLMO2ENSG00000101166.11chr20-576122455761233557611744576118155761352057613689-0.333000.000000.00001excludedHepG2U2AF1
SESLMO2ENSG00000101166.11chr20-576122455761233557611744576118155761352057613689-0.241000.000000.00000excludedK562AKAP8L
SESLMO2ENSG00000101166.11chr20-576122455761233557611744576118155761352057613689-0.440000.000000.00000excludedHepG2U2AF2
SESLMO2ENSG00000101166.11chr20-5761224557612335576117445761181557613520576136890.069000.000220.05449includedK562METAP2
SESLMO2ENSG00000101166.11chr20-576122455761233557611744576118155761352057613769-0.133000.000000.00000excludedK562AQR
SESLMO2ENSG00000101166.11chr20-5761224557612335576117445761181557613520576136890.118000.000000.00000includedK562FXR1
SESLMO2ENSG00000101166.11chr20-576122455761233557611744576118155761352057613689-0.369000.000000.00000excludedK562PUS1
SESLMO2ENSG00000101166.11chr20-576122455761233557611744576118155761352057613689-0.137000.000000.00000excludedK562NSUN2
SESLMO2ENSG00000101166.11chr20-576122455761233557611744576118155761352057613689-0.079000.000090.02398excludedK562LARP4
SESLMO2ENSG00000101166.11chr20-576122455761233557611744576118155761352057613689-0.116000.000000.00034excludedK562SSB
SESLMO2ENSG00000101166.11chr20-576122455761233557611744576118155761352057613689-0.455000.000000.00000excludedK562U2AF1
SESLMO2ENSG00000101166.11chr20-576122455761233557611744576118155761352057613689-0.098000.000040.05156excludedK562ZRANB2
SESLMO2ENSG00000101166.11chr20-576122455761233557611744576118155761352057613689-0.097000.000010.00163excludedK562HNRNPUL1
SESLMO2ENSG00000101166.11chr20-576122455761233557611744576118155761352057613689-0.103000.000010.01339excludedK562HLTF
SESLMO2ENSG00000101166.11chr20-576122455761233557611744576118155761352057613689-0.293000.000000.00002excludedHepG2SF3B4
SESLMO2ENSG00000101166.11chr20-5761224557612335576117445761181557613520576136890.064000.000890.09428includedK562RBM22
SESLMO2ENSG00000101166.11chr20-576122455761233557611744576118155761352057613689-0.258000.000000.00001excludedK562UTP18
SESLMO2ENSG00000101166.11chr20-576122455761233557611744576118155761352057613689-0.490000.000000.00000excludedK562U2AF2
SESLMO2ENSG00000101166.11chr20-576122455761233557611744576118155761352057613689-0.176000.000000.00000excludedK562TARDBP
SESLMO2ENSG00000101166.11chr20-576122455761233557611744576118155761352057613689-0.121000.000000.00020excludedK562HNRNPU
SESLMO2ENSG00000101166.11chr20-576122455761233557611744576118155761352057613689-0.324000.000000.00000excludedK562RBM15
SESLMO2ENSG00000101166.11chr20-576122455761233557611744576118155761352057613689-0.276000.000000.00000excludedK562AGGF1
SESLMO2ENSG00000101166.11chr20-5761224557612354576117445761181557613520576136890.111000.000070.05264includedK562AARS
SESLMO2ENSG00000101166.11chr20-576122455761233557611744576118155761352057613689-0.137000.000010.03259excludedK562PABPC4
SESLMO2ENSG00000101166.11chr20-5761224557612335576117445761181557613520576136890.106000.000000.00000includedK562PTBP1
SESLMO2ENSG00000101166.11chr20-576122455761233557611744576118155761352057613689-0.123000.000000.00011excludedK562NPM1
A3SSSLMO2ENSG00000101166.11chr20-5761155557611667576115555761162857611744576119060.056000.000000.00000longerK562AQR
A3SSSLMO2ENSG00000101166.11chr20-5760996357610211576099635761018157611525576116670.132000.000000.00000longerK562AQR
A3SSSLMO2ENSG00000101166.11chr20-5761224557612491576122455761233557613520576137690.121000.000000.00000longerK562AQR
A5SSSLMO2ENSG00000101166.11chr20-576115255761162857611551576116285760819957610181-0.056000.000060.00382shorterK562PUS1
A5SSSLMO2ENSG00000101166.11chr20-576115255761162857611551576116285760819957610181-0.054000.000120.01464shorterK562RBM15
A5SSSLMO2ENSG00000101166.11chr20-576115255761162857611551576116285760819957610181-0.051000.000860.04905shorterK562U2AF2

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for SLMO2 is not avaliable on ENCORE database.