SLC38A4

General Information

Gene Name       : SLC38A4
Gene ID             : ENSG00000139209.15
Essential Gene : No

Functions

Localization

Domains (AlphaFold: SLC38A4)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878SLC38A4ENSG00000139209.150.060.060.06ENCSR000AEF
HepG2SLC38A4ENSG00000139209.151.442.551.99ENCSR985KAT
K562SLC38A4ENSG00000139209.150.000.000.00ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for SLC38A4 is not avaliable on ENCORE database.



Proteins bound to RNA

  • NO known proteins bind on SLC38A4 RNA with finished eCLIP experiments on ENCORE database.





eCLIP assay for SLC38A4 is not avaliable on ENCORE database.






NO known proteins are bound to SLC38A4 RNA with finished eCLIP experiments on ENCORE database.





eCLIP assay for SLC38A4 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for SLC38A4 is not available on ENCORE database.

  • 116 RBPs can affect the levels of SLC38A4.  








The Knockdown/knockout RNA-Seq assay for SLC38A4 is not available on ENCORE database.





116 RBPs can affect the gene expression of SLC38A4 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
SLC38A4ENSG00000139209.11212.40780112.257900.919903.247001.38280HepG2AARS
SLC38A4ENSG00000139209.11918.13020258.682801.8274029.7873027.42900HepG2ABCF1
SLC38A4ENSG00000139209.1182.47380292.83780-1.8281023.6268022.24330HepG2ACO1
SLC38A4ENSG00000139209.11598.71110294.239201.0248016.2084014.56350HepG2AKAP8L
SLC38A4ENSG00000139209.11378.79300274.186900.466203.134302.41040HepG2AUH
SLC38A4ENSG00000139209.11158.9792099.519000.675702.205601.40280HepG2BCLAF1
SLC38A4ENSG00000139209.11164.9566075.525201.127005.435504.63120HepG2BOP1
SLC38A4ENSG00000139209.11211.11450137.630500.617102.781202.00690HepG2CALR
SLC38A4ENSG00000139209.1194.64620212.55470-1.167206.051304.58230HepG2CCAR1
SLC38A4ENSG00000139209.11974.60770482.732001.0135013.2124011.66180HepG2CIRBP
SLC38A4ENSG00000139209.11533.51510292.804900.8655012.0877010.89660HepG2CKAP4
SLC38A4ENSG00000139209.11102.89220803.67800-2.9655046.5248043.70440HepG2CNOT7
SLC38A4ENSG00000139209.11909.0080069.330503.71260104.04820100.95060HepG2CPSF6
SLC38A4ENSG00000139209.11334.52070197.165400.762606.600405.52540HepG2DAZAP1
SLC38A4ENSG00000139209.11445.51990270.847100.717905.716104.57580HepG2DDX19B
SLC38A4ENSG00000139209.11413.74570229.317600.851307.305605.83250HepG2DDX24
SLC38A4ENSG00000139209.11257.86370105.364301.291106.947304.99900HepG2DDX27
SLC38A4ENSG00000139209.11762.96440588.242600.375102.120601.56590HepG2DDX3X
SLC38A4ENSG00000139209.11449.7954078.731702.5142024.5778022.01860HepG2DDX59
SLC38A4ENSG00000139209.11962.18980260.315401.8860040.7824037.99500HepG2DDX5
SLC38A4ENSG00000139209.111107.35500280.174301.9826069.5162067.36000HepG2DKC1
SLC38A4ENSG00000139209.11762.25940485.768900.649905.279304.47650HepG2EIF2S1
SLC38A4ENSG00000139209.11368.06360221.297100.733905.554904.09850HepG2EIF3G
SLC38A4ENSG00000139209.111098.63120536.827301.0331012.3592011.03840HepG2EIF4A3
SLC38A4ENSG00000139209.11361.64890194.487700.894808.150006.85380HepG2EIF4G1
SLC38A4ENSG00000139209.11638.42950186.311801.7767029.3557026.99880HepG2EIF4G2
SLC38A4ENSG00000139209.11543.66850224.037501.2789014.3706012.20560HepG2ESF1
SLC38A4ENSG00000139209.11694.85190314.771301.142307.003806.12160HepG2ETF1
SLC38A4ENSG00000139209.11461.98290286.182100.690805.723804.51920HepG2EWSR1
SLC38A4ENSG00000139209.11448.27570223.319901.0052010.156808.21090HepG2FASTKD2
SLC38A4ENSG00000139209.11106.02390261.19220-1.300707.748806.53040HepG2FIP1L1
SLC38A4ENSG00000139209.11165.1718069.461201.249603.592602.43000HepG2FTO
SLC38A4ENSG00000139209.11184.90240541.64960-1.5506019.4471017.79080HepG2FXR1
SLC38A4ENSG00000139209.11270.33100502.45240-0.894307.386406.32320HepG2G3BP1
SLC38A4ENSG00000139209.11907.68140533.426900.766807.783106.27150HepG2G3BP2
SLC38A4ENSG00000139209.11286.03080137.498401.056704.682103.51280HepG2GEMIN5
SLC38A4ENSG00000139209.11111.19280194.35630-0.805604.069802.83160HepG2GNB2L1
SLC38A4ENSG00000139209.11421.0417078.575802.4217030.3938028.54950HepG2GPKOW
SLC38A4ENSG00000139209.11196.98170279.59490-0.505303.146902.10970HepG2HDGF
SLC38A4ENSG00000139209.11255.00260161.534800.658603.177102.49080HepG2HNRNPA1
SLC38A4ENSG00000139209.11118.16600181.18490-0.616602.796701.85930HepG2HNRNPA2B1
SLC38A4ENSG00000139209.11464.95700663.38500-0.512703.002801.53980HepG2HNRNPAB
SLC38A4ENSG00000139209.11733.37980179.672502.0291038.2974036.05760HepG2HNRNPC
SLC38A4ENSG00000139209.11431.73490696.12340-0.689204.731402.74910HepG2HNRNPD
SLC38A4ENSG00000139209.11572.23420101.799702.4908060.6141058.18160HepG2HNRNPF
SLC38A4ENSG00000139209.11328.50020508.79500-0.631204.391803.52830HepG2HNRNPK
SLC38A4ENSG00000139209.11243.40080179.612400.438301.988701.40560HepG2HNRNPL
SLC38A4ENSG00000139209.11335.0204074.987802.1594021.6189020.11970HepG2HNRNPLL
SLC38A4ENSG00000139209.1181.71030180.16880-1.140806.545105.16900HepG2HNRNPM
SLC38A4ENSG00000139209.11252.19320178.485000.498602.715702.11480HepG2HNRNPU
SLC38A4ENSG00000139209.11583.49710838.59370-0.523203.062501.75990HepG2HSPD1
SLC38A4ENSG00000139209.11556.46320100.240802.4727016.3714014.77270HepG2IGF2BP1
SLC38A4ENSG00000139209.11372.55900783.44690-1.072409.568407.05840HepG2ILF3
SLC38A4ENSG00000139209.11419.13210765.50890-0.869007.784305.69480HepG2KHDRBS1
SLC38A4ENSG00000139209.11233.60690513.71120-1.136909.419107.47840HepG2KHSRP
SLC38A4ENSG00000139209.11144.06980224.37540-0.639102.461701.68010HepG2LARP4
SLC38A4ENSG00000139209.11372.96590541.83880-0.538803.245102.53540HepG2MAGOH
SLC38A4ENSG00000139209.11261.76780544.86920-1.057609.288808.18920HepG2MATR3
SLC38A4ENSG00000139209.1198.30310211.32420-1.104106.968005.74340HepG2MSI2
SLC38A4ENSG00000139209.11241.9551076.512101.660909.531307.70100HepG2MTPAP
SLC38A4ENSG00000139209.11385.27740557.70220-0.533603.270502.58360HepG2NCBP2
SLC38A4ENSG00000139209.11293.5898066.502402.1422020.8079019.01730HepG2NSUN2
SLC38A4ENSG00000139209.11393.77570734.47320-0.899305.739504.42740HepG2PABPC1
SLC38A4ENSG00000139209.11683.55250496.662000.460702.885402.14820HepG2PABPC4
SLC38A4ENSG00000139209.11113.91640176.67590-0.633102.841301.98310HepG2PARN
SLC38A4ENSG00000139209.11278.51900488.82420-0.811509.305608.29910HepG2PCBP1
SLC38A4ENSG00000139209.11422.10110282.553100.579002.757801.71900HepG2PCBP2
SLC38A4ENSG00000139209.11396.25400182.660701.117208.196505.49510HepG2PHF6
SLC38A4ENSG00000139209.11314.52900153.607601.033809.780308.45840HepG2PRPF4
SLC38A4ENSG00000139209.11201.3711086.866001.212906.306305.13950HepG2PRPF8
SLC38A4ENSG00000139209.11329.05000497.40910-0.596105.815805.08170HepG2PTBP1
SLC38A4ENSG00000139209.11286.60400186.619500.618903.240702.60180HepG2PUF60
SLC38A4ENSG00000139209.11137.35930198.09430-0.528202.676502.09100HepG2PUM1
SLC38A4ENSG00000139209.11540.24310298.278800.8568011.8125010.69190HepG2PUS1
SLC38A4ENSG00000139209.11153.22030272.70860-0.831803.242402.48220HepG2RAVER1
SLC38A4ENSG00000139209.11527.77620363.628600.537404.381803.33370HepG2RBM15
SLC38A4ENSG00000139209.11114.64010263.09720-1.198506.068905.37460HepG2RBM22
SLC38A4ENSG00000139209.11635.76340488.896800.378902.551001.90040HepG2RBM25
SLC38A4ENSG00000139209.11350.13880776.12470-1.1484011.197308.36300HepG2RBM47
SLC38A4ENSG00000139209.11835.78790553.558400.594307.340606.53280HepG2NELFE
SLC38A4ENSG00000139209.111013.48660515.582900.9750020.5412019.12780HepG2RECQL
SLC38A4ENSG00000139209.11512.14650109.704802.2228034.9118033.11110HepG2RPLP0
SLC38A4ENSG00000139209.11503.01800267.813100.909304.964703.71790HepG2RPS10
SLC38A4ENSG00000139209.1193.13710150.30900-0.690502.225201.66760HepG2RPS19
SLC38A4ENSG00000139209.111125.36840806.742900.480102.866302.05120HepG2RPS3A
SLC38A4ENSG00000139209.11588.80900296.598800.989207.013304.66530HepG2RTF1
SLC38A4ENSG00000139209.11244.07500158.951800.618603.637602.91670HepG2SAFB2
SLC38A4ENSG00000139209.11614.79500416.625300.561302.916302.22300HepG2SF3A3
SLC38A4ENSG00000139209.11331.6826074.214002.1599024.6540022.79140HepG2SF3B1
SLC38A4ENSG00000139209.11629.81480517.845200.282301.889201.38500HepG2SF3B4
SLC38A4ENSG00000139209.1182.26990250.53980-1.606603.832802.06890HepG2SFPQ
SLC38A4ENSG00000139209.11368.77300178.917301.0433011.5859010.31530HepG2SLBP
SLC38A4ENSG00000139209.1189.40600185.36970-1.052006.777905.84020HepG2SMN1
SLC38A4ENSG00000139209.11402.2514082.579402.2841021.7019019.59760HepG2SNRNP70
SLC38A4ENSG00000139209.11894.40920297.170401.5895044.4944043.11840HepG2SRFBP1
SLC38A4ENSG00000139209.11195.22270107.254700.864003.476701.65610HepG2SRP68
SLC38A4ENSG00000139209.11327.88440540.52720-0.721207.654906.96000HepG2SRSF1
SLC38A4ENSG00000139209.11126.32160184.24690-0.544502.415901.82620HepG2SRSF5
SLC38A4ENSG00000139209.11554.63040100.024402.4711045.5048043.41340HepG2SRSF7
SLC38A4ENSG00000139209.111832.04910258.034802.82770183.44460181.12010HepG2SSB
SLC38A4ENSG00000139209.11362.06020174.397101.053807.079705.21590HepG2STAU1
SLC38A4ENSG00000139209.11456.62210701.68460-0.619804.191402.80670HepG2STIP1
SLC38A4ENSG00000139209.11156.43340209.55030-0.421701.877301.34640HepG2SUCLG1
SLC38A4ENSG00000139209.11327.39080176.311400.892806.393205.00200HepG2SUPT6H
SLC38A4ENSG00000139209.11306.59360112.101201.451409.989308.83680HepG2SUPV3L1
SLC38A4ENSG00000139209.11747.03130485.871800.620507.324206.48720HepG2TAF15
SLC38A4ENSG00000139209.11416.5874073.131502.5100036.3332034.28220HepG2TARDBP
SLC38A4ENSG00000139209.1153.05280173.45060-1.7090011.9043010.99440HepG2TIAL1
SLC38A4ENSG00000139209.11234.63280174.980600.423102.034201.53630HepG2TRIM56
SLC38A4ENSG00000139209.1132.9135066.22080-1.008602.448101.73390HepG2UCHL5
SLC38A4ENSG00000139209.11267.26140369.48280-0.467303.167702.43110HepG2UPF1
SLC38A4ENSG00000139209.11203.76520356.72130-0.807906.862505.99060HepG2UTP3
SLC38A4ENSG00000139209.11158.28620268.10190-0.760203.366601.95920HepG2XRCC5
SLC38A4ENSG00000139209.11146.25180299.87010-1.035906.329704.77340HepG2XRCC6
SLC38A4ENSG00000139209.11261.95840110.351401.247107.524606.34290HepG2XRN2
SLC38A4ENSG00000139209.11427.18450151.591801.4946023.5076021.89370HepG2ZC3H8
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for SLC38A4 is not available on ENCORE database.





1 RBPs can affect the splicing of SLC38A4 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SESLC38A4ENSG00000139209.11chr12-4719738547197577471867354718696647219685472197800.346000.000020.01549includedHepG2XPO5

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for SLC38A4 is not avaliable on ENCORE database.