SBF2

General Information

Gene Name       : SBF2
Gene ID             : ENSG00000133812.15
Essential Gene : No

Functions

Localization

Domains (AlphaFold: SBF2)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878SBF2ENSG00000133812.150.850.240.54ENCSR000AEF
HepG2SBF2ENSG00000133812.1511.3916.1313.76ENCSR985KAT
K562SBF2ENSG00000133812.152.853.593.22ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for SBF2 is not avaliable on ENCORE database.



Proteins bound to RNA
  • SBF2 RNA is bound by 22 proteins.  







eCLIP assay for SBF2 is not avaliable on ENCORE database.





22 proteins are bound to SBF2 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr1199853199985335-CDS,intron-Distal,intron-Proximal3.517575.15776HepG2BCLAF1
chr1198671199867150-CDS,intron-Distal3.821415.15776HepG2BCLAF1
chr1199898879989919-CDS,intron-Distal,intron-Proximal3.503985.63425HepG2BCLAF1
chr1198643109864318-CDS,intron-Distal,intron-Proximal3.665303.28366HepG2BCLAF1
chr1198539119854057-CDS,intron-Distal,intron-Proximal3.821663.00221HepG2U2AF1
chr1198716119871672-CDS,intron-Distal3.128186.50801HepG2BCLAF1
chr1199900529990093-CDS,intron-Distal,intron-Proximal5.054106.58593HepG2BCLAF1
chr1198751689875227-CDS,intron-Distal,intron-Proximal3.024665.00905HepG2BCLAF1
chr1198742249874288-CDS,intron-Distal3.187405.27152HepG2BCLAF1
chr1198780789878113-CDS,intron-Distal4.480334.37348HepG2BCLAF1
chr1198092079809270-CDS,intron-Distal3.111845.40132HepG2BCLAF1
chr111001403910014104-CDS,intron-Distal,intron-Proximal4.685133.45799HepG2U2AF2
chr111005131010051374-CDS,intron-Distal,intron-Proximal3.135665.41373HepG2PPIG
chr1198782019878261-CDS,intron-Distal4.127824.50960HepG2GRWD1
chr111005006110050105-CDS,intron-Distal,intron-Proximal4.127123.49905HepG2PPIG
chr1198750919875236-CDS,intron-Distal,intron-Proximal3.605244.71371HepG2GRWD1
chr111006448010064530-CDS,intron-Distal,intron-Proximal3.267573.34920HepG2HLTF
chr111006438710064450-CDS,intron-Distal,intron-Proximal4.223453.49332HepG2PPIG
chr111006439010064402-CDS,intron-Distal,intron-Proximal3.567343.68471HepG2BCLAF1
chr111005259310052605-CDS,intron-Distal,intron-Proximal4.083207.65975HepG2BCLAF1
chr1198715699871766-CDS,intron-Distal,intron-Proximal3.516565.22339HepG2ZNF800
chr1198539329854051-CDS,intron-Distal,intron-Proximal3.6245310.56168HepG2PTBP1
chr111001109410011140-CDS,intron-Distal4.2990410.57092HepG2BCLAF1
chr111002419710024234-CDS,intron-Distal3.961594.76554HepG2BCLAF1
chr111005130710051358-CDS,intron-Distal,intron-Proximal3.2970610.96545HepG2BCLAF1
chr111005135810051424-CDS,intron-Distal,intron-Proximal4.1149216.43154HepG2BCLAF1
chr1198539479854047-CDS,intron-Distal,intron-Proximal4.148635.76537HepG2PCBP2
chr111004999910050039-CDS,intron-Distal3.339634.26492HepG2BCLAF1
chr1198091729809207-CDS,intron-Distal,intron-Proximal3.171633.17233HepG2BCLAF1
chr111006446710064530-CDS,intron-Distal,intron-Proximal5.0453715.63349HepG2PPIG
chr111001104310011094-CDS,intron-Distal,intron-Proximal5.0486614.25738HepG2BCLAF1
chr111002246010022499-CDS,intron-Distal,intron-Proximal3.187845.63425HepG2BCLAF1
chr1198781529878266-CDS,intron-Distal3.3062411.49744HepG2BCLAF1
chr1198539329854049-CDS,intron-Distal,intron-Proximal4.0260420.41981HepG2U2AF2
chr1198685179868549-CDS,intron-Distal4.533784.37348HepG2BCLAF1
chr111021551110215535-CDS,intron-Distal,intron-Proximal4.077363.49905HepG2PPIG
chr1198717249871766-CDS,intron-Distal,intron-Proximal3.381366.20035HepG2BCLAF1
chr1198750949875150-CDS,intron-Distal3.593117.83567HepG2BCLAF1
chr1199899199989969-CDS,intron-Distal,intron-Proximal3.583427.93794HepG2BCLAF1
chr111006440210064476-CDS,intron-Distal3.746447.83567HepG2BCLAF1
chr1198611719861244-CDS,intron-Distal,intron-Proximal3.7344011.19372HepG2BCLAF1
chr1198641699864234-CDS,intron-Distal,intron-Proximal3.9976912.07231HepG2BCLAF1
chr1198799199879944-CDS,intron-Distal,intron-Proximal3.427586.47196HepG2BCLAF1
chr111001982610019881-CDS,intron-Distal3.269597.13168HepG2BCLAF1
chr1198611199861160-CDS,intron-Distal,intron-Proximal3.885594.76554HepG2BCLAF1
chr111005262110052718-CDS,intron-Distal,intron-Proximal4.824266.46301HepG2PPIG
chr111006448410064528-CDS,intron-Distal3.3573913.76394HepG2BCLAF1
chr111031551010315597-CDS,intron-Distal3.515935.86107HepG2PPIG
chr1199174889917524-CDS,intron-Distal,intron-Proximal3.898136.67313HepG2BCLAF1
chr111018628610186451-intron-Distal4.187709.61167HepG2HNRNPM
chr111018197610182039-intron-Distal4.2482616.27379HepG2PTBP1
chr1198498309849937-intron-Distal,intron-Proximal3.718806.82051HepG2QKI
chr111019100210191072-intron-Distal4.171253.55983HepG2HLTF
chr1199726059972709-intron-Distal5.137265.07733HepG2PTBP1
chr111031129010311399-intron-Distal3.741923.15816HepG2PRPF4
chr111018195510182019-intron-Distal4.563603.42734K562PTBP1
chr111019038810190461-intron-Distal4.423524.08455HepG2CSTF2
chr111011940110119479-intron-Distal3.422027.03905HepG2SUGP2
chr111029668810296747-intron-Distal3.227585.09956HepG2PTBP1
chr111011870710118849-intron-Distal4.632614.31871HepG2HNRNPM
chr1198499379849997-intron-Distal3.939566.08171HepG2QKI
chr1199643219964444-intron-Distal5.5298410.20560HepG2PTBP1
chr111031509010315181-intron-Distal5.531568.51022HepG2XPO5
chr111011996310120019-intron-Distal3.522843.10640HepG2SUGP2
chr111013252810132622-intron-Distal3.696293.25538K562KHSRP
chr111015544210155590-intron-Distal4.019293.30829HepG2CSTF2
chr111029507610295235-intron-Distal4.167303.97888HepG2HNRNPL
chr1198515289851645-intron-Distal4.556885.07478HepG2U2AF2
chr111020976510209856-intron-Distal4.272563.74583HepG2PTBP1
chr111005045910050516-intron-Distal4.373207.55717HepG2PTBP1
chr111030341910303455-intron-Distal4.021413.62366HepG2HNRNPM
chr111018036610180471-intron-Distal3.751803.45805K562KHSRP
chr1198470249847126-intron-Distal3.120246.13708HepG2SUGP2
chr111019759110197667-intron-Distal3.008053.95507HepG2SUGP2
chr111010039910100517-intron-Distal4.045983.79098HepG2SUGP2
chr1198609289860997-intron-Distal,intron-Proximal5.8188013.10828HepG2U2AF2
chr111019759910197655-intron-Distal3.881965.95721HepG2MATR3
chr111019441310194482-intron-Distal3.032833.54017HepG2HLTF
chr111018195710181976-intron-Distal3.8010510.23137HepG2PTBP1
chr111018618810186286-intron-Distal3.226825.21690HepG2HNRNPM
chr1199535459953656-intron-Distal3.296253.35050HepG2SUGP2
chr111000903710009092-intron-Distal4.410703.89085K562EXOSC5
chr111002077710020873-intron-Distal4.470599.01740HepG2HNRNPL
chr1198607309860809-intron-Distal4.4991413.33368HepG2U2AF2
chr111030679810306904-intron-Distal3.487965.50064HepG2PTBP1
chr111028602610286081-intron-Distal3.481545.62974HepG2CSTF2
chr111012063410120684-intron-Distal3.977533.04224HepG2SUGP2
chr1198481789848258-intron-Distal4.459783.73283HepG2HNRNPL
chr111011919010119244-intron-Distal3.618185.54651HepG2SUGP2
chr111015685210156923-intron-Distal4.343574.15056HepG2HLTF
chr1199705719970647-intron-Distal3.624475.50064HepG2PTBP1
chr111012066110120754-intron-Distal4.120983.96879HepG2MATR3
chr111016612710166212-intron-Distal3.296204.26114HepG2HNRNPL
chr111031531610315376-intron-Distal4.053213.86455HepG2GTF2F1
chr111031530310315382-intron-Distal3.093514.61952HepG2FAM120A
chr111031512010315237-intron-Distal4.555895.03029HepG2NKRF
chr111016787710167917-intron-Distal5.665099.67630HepG2HNRNPM
chr111000925010009302-intron-Distal3.068453.14999K562EXOSC5
chr111013248710132595-intron-Distal4.816415.07255HepG2KHSRP
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for SBF2 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for SBF2 is not available on ENCORE database.

  • 104 RBPs can affect the levels of SBF2.  








The Knockdown/knockout RNA-Seq assay for SBF2 is not available on ENCORE database.





104 RBPs can affect the gene expression of SBF2 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
SBF2ENSG00000133812.101352.327301079.567900.324902.510901.48560HepG2AATF
SBF2ENSG00000133812.101273.206701731.76230-0.443803.700902.61780HepG2ABCF1
SBF2ENSG00000133812.101217.263601415.89820-0.218102.254001.69450HepG2ACO1
SBF2ENSG00000133812.10834.676501230.66280-0.560105.459204.12410HepG2ADAR
SBF2ENSG00000133812.101354.842202541.07890-0.9073011.4555010.44480HepG2AKAP1
SBF2ENSG00000133812.101378.243302102.59530-0.609306.590405.40290HepG2ASCC1
SBF2ENSG00000133812.102254.621501950.933400.208602.190501.56660HepG2AUH
SBF2ENSG00000133812.10476.09620872.57910-0.874007.983106.34150HepG2BCCIP
SBF2ENSG00000133812.10789.99680966.04950-0.290301.826501.33100HepG2BOP1
SBF2ENSG00000133812.101490.834702000.20700-0.424002.694501.73520HepG2CCAR1
SBF2ENSG00000133812.101339.729801997.58900-0.576306.123205.00200HepG2CIRBP
SBF2ENSG00000133812.101059.563801415.56740-0.417907.137806.16120HepG2CKAP4
SBF2ENSG00000133812.101148.80030886.873100.373202.643201.96960HepG2CPSF6
SBF2ENSG00000133812.10984.434801454.94390-0.563609.353608.30260HepG2CELF1
SBF2ENSG00000133812.10908.372501190.71480-0.390503.248602.51690HepG2DDX21
SBF2ENSG00000133812.101438.533102434.30270-0.758908.439207.39670HepG2DDX3X
SBF2ENSG00000133812.10625.36030857.91980-0.456202.625601.86950HepG2DDX55
SBF2ENSG00000133812.101429.206801007.113800.504902.338801.44090HepG2DDX59
SBF2ENSG00000133812.10961.556301228.27080-0.353205.012504.17510HepG2DNAJC2
SBF2ENSG00000133812.10755.604701352.32680-0.8397010.507608.85910HepG2EEF2
SBF2ENSG00000133812.10749.961401127.45500-0.588205.566003.98560HepG2EFTUD2
SBF2ENSG00000133812.101374.725902010.25130-0.548205.198704.40070HepG2EIF2S1
SBF2ENSG00000133812.10709.422601097.84140-0.630005.418104.18460HepG2EIF3D
SBF2ENSG00000133812.101281.325702221.72390-0.794009.109707.95660HepG2EIF4A3
SBF2ENSG00000133812.10994.880202162.85480-1.1203013.5880012.13130HepG2EIF4B
SBF2ENSG00000133812.101063.630001383.56500-0.379403.548602.60200HepG2EWSR1
SBF2ENSG00000133812.101071.140501463.59970-0.450403.112701.36130HepG2FMR1
SBF2ENSG00000133812.101808.470101355.269600.416104.359103.38480HepG2FUBP3
SBF2ENSG00000133812.101219.109002241.14250-0.8784012.9372011.55100HepG2FXR1
SBF2ENSG00000133812.101212.207302079.24280-0.778409.393208.20310HepG2G3BP1
SBF2ENSG00000133812.101683.514502207.05030-0.390603.213202.25200HepG2G3BP2
SBF2ENSG00000133812.10672.48280977.50180-0.539604.663903.49600HepG2GEMIN5
SBF2ENSG00000133812.10680.739101251.09310-0.8780013.6730012.40930HepG2HNRNPA1
SBF2ENSG00000133812.101074.249601437.72400-0.420505.668904.41060HepG2HNRNPA2B1
SBF2ENSG00000133812.101112.349001391.60730-0.323102.455001.79860HepG2HNRNPC
SBF2ENSG00000133812.101941.415601272.332300.6095013.7996012.35810HepG2HNRNPF
SBF2ENSG00000133812.101392.082302104.82760-0.596507.213906.12570HepG2HNRNPK
SBF2ENSG00000133812.101199.14170959.383600.321702.035901.48720HepG2HNRNPLL
SBF2ENSG00000133812.10878.095701206.33560-0.458204.809803.59580HepG2HNRNPM
SBF2ENSG00000133812.101855.375801252.886900.566403.401002.60440HepG2IGF2BP1
SBF2ENSG00000133812.101272.636002113.59540-0.731908.914307.77970HepG2IGF2BP2
SBF2ENSG00000133812.101272.697001983.15340-0.639902.326801.43250HepG2IGF2BP3
SBF2ENSG00000133812.101183.000701412.08340-0.255402.247301.57800HepG2ILF2
SBF2ENSG00000133812.101520.926202125.74650-0.483003.357602.24080HepG2KHSRP
SBF2ENSG00000133812.101051.656302112.16360-1.0061012.4195010.67070HepG2LARP4
SBF2ENSG00000133812.10849.877902241.92280-1.3994024.5509022.72130HepG2MAGOH
SBF2ENSG00000133812.10934.776602254.54920-1.2701021.3629019.74020HepG2MATR3
SBF2ENSG00000133812.10729.771001149.02780-0.654903.807902.57930HepG2METAP2
SBF2ENSG00000133812.101061.325401415.00210-0.414904.238603.24850HepG2MSI2
SBF2ENSG00000133812.101612.226801188.233500.440103.667802.27200HepG2NAA15
SBF2ENSG00000133812.101153.097702307.72050-1.0010014.8911013.50040HepG2NCBP2
SBF2ENSG00000133812.101981.699702783.75890-0.490303.194201.65640HepG2NKRF
SBF2ENSG00000133812.101191.411501551.22480-0.380704.288803.33910HepG2NOL12
SBF2ENSG00000133812.101076.06840850.702800.338902.351101.65930HepG2NSUN2
SBF2ENSG00000133812.101588.290702220.87490-0.483702.375701.56450HepG2PABPC1
SBF2ENSG00000133812.101433.015502055.46940-0.520404.807503.86730HepG2PABPC4
SBF2ENSG00000133812.10961.327501368.34940-0.509308.300906.95950HepG2PARN
SBF2ENSG00000133812.101077.343302078.99050-0.9484016.0890014.82440HepG2PCBP1
SBF2ENSG00000133812.101628.738801347.727200.273103.076802.26690HepG2PRPF4
SBF2ENSG00000133812.101303.805002115.32140-0.698106.797906.01530HepG2PTBP1
SBF2ENSG00000133812.101040.196401480.79540-0.509505.593604.78530HepG2PUF60
SBF2ENSG00000133812.101173.794101442.18080-0.297103.776203.07940HepG2PUS1
SBF2ENSG00000133812.103113.510402291.220600.442304.222803.47500HepG2QKI
SBF2ENSG00000133812.102676.216401816.346000.559109.829908.35180HepG2RBM15
SBF2ENSG00000133812.101151.647801872.17620-0.7010015.1146014.10210HepG2RBM22
SBF2ENSG00000133812.10997.856601446.01440-0.535202.746901.75820HepG2RBM27
SBF2ENSG00000133812.10723.356101174.22180-0.698904.294602.97140HepG2RCC2
SBF2ENSG00000133812.101433.155702354.25700-0.716109.147008.26670HepG2NELFE
SBF2ENSG00000133812.101782.911602192.47580-0.298301.976601.44330HepG2RECQL
SBF2ENSG00000133812.102202.368701370.571400.684209.907608.75120HepG2RPLP0
SBF2ENSG00000133812.10495.855001068.20010-1.1072020.0182018.59690HepG2RPS19
SBF2ENSG00000133812.10812.460501333.71260-0.715104.633603.61240HepG2RPS2
SBF2ENSG00000133812.101264.307802440.71130-0.9490010.740109.20900HepG2RPS3A
SBF2ENSG00000133812.10799.501401072.18100-0.423403.087602.09230HepG2SERBP1
SBF2ENSG00000133812.101540.84070949.579800.698309.151307.94160HepG2SF3B1
SBF2ENSG00000133812.101664.674702202.55430-0.403904.482703.75710HepG2SF3B4
SBF2ENSG00000133812.101719.487301419.889200.276103.987103.16780HepG2SLBP
SBF2ENSG00000133812.10967.577101435.66850-0.5693012.9220011.68950HepG2SMN1
SBF2ENSG00000133812.101473.930202298.89530-0.641308.863108.12410HepG2SRSF1
SBF2ENSG00000133812.101000.196901462.09150-0.547709.628108.55430HepG2SRSF5
SBF2ENSG00000133812.102399.734501250.014700.9408033.2758031.39420HepG2SRSF7
SBF2ENSG00000133812.101114.733301835.92280-0.7198018.9191017.83490HepG2SSB
SBF2ENSG00000133812.101416.552601662.78220-0.231202.665102.05210HepG2SUCLG1
SBF2ENSG00000133812.101725.113302066.07440-0.260202.558102.01690HepG2TAF15
SBF2ENSG00000133812.101698.485202874.23310-0.758903.803402.56280HepG2TBRG4
SBF2ENSG00000133812.102265.209501898.719200.254502.126001.39180HepG2TIA1
SBF2ENSG00000133812.10845.935901343.27610-0.6671010.295809.43780HepG2TIAL1
SBF2ENSG00000133812.10815.834901355.27390-0.7322016.2363015.02510HepG2TRIM56
SBF2ENSG00000133812.101179.758301446.70400-0.294302.316001.52310HepG2TUFM
SBF2ENSG00000133812.10617.064201495.70580-1.2773024.8716022.93430HepG2U2AF1
SBF2ENSG00000133812.10271.56190504.52520-0.893607.933306.64980HepG2UCHL5
SBF2ENSG00000133812.10503.36510782.08360-0.635703.512002.37160HepG2UPF2
SBF2ENSG00000133812.101102.032401480.37960-0.425806.240205.39950HepG2UTP3
SBF2ENSG00000133812.101536.261502186.21900-0.509003.420902.19210HepG2XPO5
SBF2ENSG00000133812.10497.51610840.72500-0.756906.937805.80270HepG2XRN2
SBF2ENSG00000133812.101517.327601330.021000.190001.904501.33290HepG2ZC3H8
SBF2ENSG00000133812.10276.48620396.95080-0.521803.151002.45290K562AKAP8L
SBF2ENSG00000133812.10187.48090283.29190-0.595502.714402.13070K562AQR
SBF2ENSG00000133812.10303.67670427.17170-0.492303.611902.59440K562DKC1
SBF2ENSG00000133812.10127.98830209.66280-0.712103.857502.92730K562EIF3G
SBF2ENSG00000133812.10171.71580241.61420-0.492702.318801.75690K562FXR1
SBF2ENSG00000133812.10212.95880139.303300.612202.128801.32210K562KRR1
SBF2ENSG00000133812.10222.30240433.09950-0.962208.580406.64410K562MSI2
SBF2ENSG00000133812.10133.45870203.80250-0.610802.357201.59000K562PCBP3
SBF2ENSG00000133812.10102.38940156.32900-0.610502.290501.56160K562POLR2G
SBF2ENSG00000133812.10218.12860317.25220-0.540503.298002.57970K562PTBP1
SBF2ENSG00000133812.10212.40220311.00840-0.550203.061302.32110K562SRSF1
SBF2ENSG00000133812.10343.35810263.490300.381902.199801.55450K562UPF1
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for SBF2 is not available on ENCORE database.





2 RBPs can affect the splicing of SBF2 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SESBF2ENSG00000133812.10chr11-985090298510439838386983857198537709853967-0.439000.001630.03092excludedHepG2U2AF1
SESBF2ENSG00000133812.10chr11-981737798175049812102981223098295469829691-0.235000.002440.04271excludedHepG2U2AF1
SESBF2ENSG00000133812.10chr11-9849672984976898383869838571985090298510430.205000.000030.00473includedHepG2QKI
MXESBF2ENSG00000133812.10chr11-981737798175049829546982969198121029812230983044798305490.223000.002090.037431includedHepG2U2AF1

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for SBF2 is not avaliable on ENCORE database.