RRP15

General Information

Gene Name       : RRP15
Gene ID             : ENSG00000067533.5
Essential Gene : Yes

Functions

Localization

Domains (AlphaFold: RRP15)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878RRP15ENSG00000067533.512.788.8610.82ENCSR000AEF
HepG2RRP15ENSG00000067533.515.9618.9017.43ENCSR985KAT
K562RRP15ENSG00000067533.514.5310.7812.65ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for RRP15 is not avaliable on ENCORE database.



Proteins bound to RNA
  • RRP15 RNA is bound by 8 proteins.  







eCLIP assay for RRP15 is not avaliable on ENCORE database.





8 proteins are bound to RRP15 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr1218505029218505085+3'-UTR3.232363.29111K562FAM120A
chr1218505387218505424+3'-UTR3.456093.88742K562FAM120A
chr1218505799218505917+3'-UTR4.207346.42251K562FAM120A
chr1218506496218506537+3'-UTR4.087613.54095K562FAM120A
chr1218475634218475766+CDS,intron-Proximal5.039746.92104HepG2GRWD1
chr1218478372218478484+CDS,intron-Proximal3.002303.34735K562UCHL5
chr1218480856218480974+CDS3.922563.31827HepG2GRWD1
chr1218458663218458797+CDS3.950307.45042K562UCHL5
chr1218480881218480971+CDS4.754075.70640HepG2BCLAF1
chr1218478380218478469+CDS,intron-Proximal3.775884.49887K562ZNF622
chr1218475641218475719+CDS3.118703.84932K562ZNF800
chr1218458726218458801+CDS,intron-Proximal4.624045.11007HepG2GRWD1
chr1218475634218475803+CDS,intron-Proximal3.123458.54654K562ZNF622
chr1218475655218475761+CDS4.2351311.27765K562UCHL5
chr1218498666218498740+intron-Distal3.246253.10883HepG2SUGP2
chr1218504123218504249+intron-Distal,intron-Proximal3.975333.90026K562KHSRP
chr1218480618218480718+intron-Distal,intron-Proximal3.584265.14864K562KHSRP
chr1218478690218478830+intron-Distal4.148104.58794K562KHSRP
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for RRP15 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for RRP15 is not available on ENCORE database.

  • 110 RBPs can affect the levels of RRP15.  








The Knockdown/knockout RNA-Seq assay for RRP15 is not available on ENCORE database.





110 RBPs can affect the gene expression of RRP15 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
RRP15ENSG00000067533.5829.75420596.172000.476902.825702.28780HepG2AKAP1
RRP15ENSG00000067533.5343.89000447.37570-0.379502.562201.82080HepG2AKAP8L
RRP15ENSG00000067533.5327.39550658.12300-1.007308.732107.00590HepG2CCAR1
RRP15ENSG00000067533.5291.55350673.45730-1.2078015.2515013.79740HepG2CPSF6
RRP15ENSG00000067533.5247.02180428.64700-0.795204.197503.37920HepG2DDX21
RRP15ENSG00000067533.5447.80560764.75430-0.772104.261703.06370HepG2DDX59
RRP15ENSG00000067533.5234.46520384.13920-0.712306.045705.03780HepG2DNAJC21
RRP15ENSG00000067533.5247.52730380.71570-0.621105.676004.78970HepG2DNAJC2
RRP15ENSG00000067533.5214.73090471.60580-1.1351010.691809.57330HepG2EIF2S1
RRP15ENSG00000067533.5694.52970507.438100.452702.163701.55300HepG2EIF4B
RRP15ENSG00000067533.5850.85230678.877500.325702.600701.78530HepG2EIF4G1
RRP15ENSG00000067533.5380.02790650.33630-0.775107.770106.43300HepG2EIF4G2
RRP15ENSG00000067533.5202.06170298.46750-0.562803.362102.05790HepG2FAM120A
RRP15ENSG00000067533.5777.25680545.325800.511203.347202.50780HepG2FIP1L1
RRP15ENSG00000067533.5332.69530245.571200.438002.236601.52230HepG2FUBP3
RRP15ENSG00000067533.5339.93840487.80060-0.521002.971102.28300HepG2G3BP1
RRP15ENSG00000067533.5314.89630763.46500-1.2777015.6333014.22910HepG2GPKOW
RRP15ENSG00000067533.5230.21380387.81910-0.752405.197304.34990HepG2HNRNPA1
RRP15ENSG00000067533.5330.54700431.36650-0.384101.886301.30310HepG2HNRNPC
RRP15ENSG00000067533.5382.86110633.54780-0.726608.959707.76340HepG2HNRNPF
RRP15ENSG00000067533.5662.62250493.928100.423802.650901.96670HepG2HNRNPK
RRP15ENSG00000067533.5474.37720626.93670-0.402303.989303.19180HepG2HNRNPL
RRP15ENSG00000067533.5430.25740728.58430-0.759906.905505.96150HepG2HNRNPLL
RRP15ENSG00000067533.5371.57610623.86990-0.747607.975806.80450HepG2IGF2BP1
RRP15ENSG00000067533.5464.77250694.65110-0.579803.599502.65220HepG2LARP4
RRP15ENSG00000067533.5414.63190645.99390-0.639704.979403.98660HepG2NSUN2
RRP15ENSG00000067533.5653.30290448.804400.541605.909105.07540HepG2PCBP1
RRP15ENSG00000067533.5416.36930651.40510-0.645706.218405.37240HepG2PUF60
RRP15ENSG00000067533.5424.23410690.97820-0.703808.105406.98360HepG2PUM2
RRP15ENSG00000067533.5270.09020453.52830-0.747808.295807.32780HepG2PUS1
RRP15ENSG00000067533.5351.14510448.87220-0.354201.881501.31610HepG2RBM25
RRP15ENSG00000067533.5465.22640682.39390-0.552704.340603.51430HepG2RPLP0
RRP15ENSG00000067533.5220.98360381.61810-0.788207.697206.70310HepG2SAFB2
RRP15ENSG00000067533.5499.15470721.18270-0.530904.116403.27180HepG2SF3B1
RRP15ENSG00000067533.5445.17880624.53060-0.488405.350404.42890HepG2SLBP
RRP15ENSG00000067533.5494.89870802.43210-0.697204.147903.18220HepG2SNRNP70
RRP15ENSG00000067533.5622.93400812.07530-0.382503.805303.24590HepG2SRFBP1
RRP15ENSG00000067533.5851.09070496.274900.7781012.3355011.48980HepG2SRSF1
RRP15ENSG00000067533.5404.34620622.41850-0.622306.972505.94790HepG2SRSF7
RRP15ENSG00000067533.5512.04670705.07830-0.461504.815304.17520HepG2SSB
RRP15ENSG00000067533.5559.21790388.090800.526903.246201.86350HepG2SSRP1
RRP15ENSG00000067533.5257.10730368.40780-0.518902.631901.71300HepG2SUPT6H
RRP15ENSG00000067533.5289.13480549.64810-0.926803.464102.71740HepG2SUPV3L1
RRP15ENSG00000067533.5285.80070710.01490-1.3128015.2088013.73460HepG2TARDBP
RRP15ENSG00000067533.5270.85890416.42200-0.620504.799404.17800HepG2TIAL1
RRP15ENSG00000067533.5312.69880420.10240-0.426003.175802.58110HepG2TRIM56
RRP15ENSG00000067533.5593.28730466.608800.346402.029401.48230HepG2U2AF1
RRP15ENSG00000067533.5502.55490673.52510-0.422502.344401.57890HepG2UBE2L3
RRP15ENSG00000067533.5399.51820494.29630-0.307102.059101.44120HepG2UPF1
RRP15ENSG00000067533.5636.34070477.227300.415003.514402.85440HepG2UTP3
RRP15ENSG00000067533.5322.71490541.06590-0.745502.272301.60970HepG2XRN2
RRP15ENSG00000067533.5348.61080543.63460-0.641007.779506.98330HepG2ZNF622
RRP15ENSG00000067533.51056.10040741.323100.510504.615103.04910K562AARS
RRP15ENSG00000067533.5366.20810629.74840-0.782109.004708.05640K562AGGF1
RRP15ENSG00000067533.5485.16230691.91650-0.512104.430103.11720K562AKAP8
RRP15ENSG00000067533.5465.18810655.26170-0.494302.217701.63090K562AKAP8L
RRP15ENSG00000067533.5775.856901124.76660-0.535806.710205.18530K562BCLAF1
RRP15ENSG00000067533.5864.867801368.59270-0.662107.355605.90990K562BOP1
RRP15ENSG00000067533.5607.32210889.61930-0.550705.102203.37410K562CIRBP
RRP15ENSG00000067533.51076.498401879.25810-0.803803.148602.00510K562CNOT7
RRP15ENSG00000067533.5480.240001455.17430-1.5994045.4819042.42730K562CPSF6
RRP15ENSG00000067533.5608.51620853.30330-0.487804.936203.46520K562CSTF2
RRP15ENSG00000067533.5945.714901189.50770-0.330903.385602.04500K562DDX21
RRP15ENSG00000067533.5287.44450527.08740-0.874809.603807.54170K562DDX3X
RRP15ENSG00000067533.52451.221501727.687200.504606.346105.41730K562DDX47
RRP15ENSG00000067533.5415.39670534.39010-0.363402.569101.32230K562DDX6
RRP15ENSG00000067533.5412.25940578.93050-0.489804.650403.05990K562EIF2S1
RRP15ENSG00000067533.5901.069101805.84200-1.0030010.547809.28280K562EIF2S2
RRP15ENSG00000067533.5855.14000478.155200.838605.209803.78930K562EIF3A
RRP15ENSG00000067533.51404.84250853.506900.718807.628406.31410K562EIF3G
RRP15ENSG00000067533.5381.88630495.89340-0.376902.646001.52580K562EIF4B
RRP15ENSG00000067533.5346.67620480.66770-0.471503.182601.77870K562EWSR1
RRP15ENSG00000067533.5680.78650930.03820-0.450104.197702.59660K562EXOSC5
RRP15ENSG00000067533.5660.99190913.10740-0.466204.021502.07820K562FASTKD2
RRP15ENSG00000067533.51337.173401914.46650-0.517802.804101.94960K562FIP1L1
RRP15ENSG00000067533.5838.921301480.66800-0.8196011.752709.91830K562FMR1
RRP15ENSG00000067533.5797.995501255.02690-0.653306.809105.30860K562FTO
RRP15ENSG00000067533.51625.29580572.666801.5048054.2182051.76140K562FXR1
RRP15ENSG00000067533.5523.78630793.57000-0.599406.070903.84540K562G3BP1
RRP15ENSG00000067533.5805.89640586.882900.457402.586401.90710K562G3BP2
RRP15ENSG00000067533.5650.892301389.30740-1.0939020.7826018.48350K562GPKOW
RRP15ENSG00000067533.51767.603402406.73500-0.445302.915402.14100K562GRSF1
RRP15ENSG00000067533.5677.58680984.85180-0.539505.893204.35650K562HNRNPA1
RRP15ENSG00000067533.5372.20620973.18310-1.386603.625102.16310K562HNRNPA2B1
RRP15ENSG00000067533.5497.06370811.67430-0.707503.382402.73190K562HNRNPC
RRP15ENSG00000067533.51397.20210829.052200.752903.168301.83880K562HNRNPK
RRP15ENSG00000067533.51796.398202595.82510-0.531102.889402.07710K562HSPD1
RRP15ENSG00000067533.5497.68750829.92930-0.737706.115104.33070K562IGF2BP2
RRP15ENSG00000067533.5616.91860844.20120-0.452503.815402.37210K562IGF2BP3
RRP15ENSG00000067533.5564.00600695.46690-0.302302.200201.47460K562KIF1C
RRP15ENSG00000067533.5793.639301186.36320-0.580004.031402.88760K562KRR1
RRP15ENSG00000067533.51090.21000872.348400.321502.615001.79820K562MAGOH
RRP15ENSG00000067533.5469.23420665.67580-0.504503.516402.25790K562MAK16
RRP15ENSG00000067533.51086.10330870.597700.319002.559001.67490K562MATR3
RRP15ENSG00000067533.5793.032201356.13000-0.7740011.426609.56580K562METAP2
RRP15ENSG00000067533.5846.132001295.29580-0.6143014.1149012.61210K562NSUN2
RRP15ENSG00000067533.5364.78590851.89320-1.223602.821901.82000K562PABPN1
RRP15ENSG00000067533.5817.992301183.00410-0.532304.473803.41740K562PCBP3
RRP15ENSG00000067533.5728.43460907.39710-0.316902.102201.40430K562POLR2G
RRP15ENSG00000067533.51423.719402173.07710-0.610103.363402.44390K562PPIG
RRP15ENSG00000067533.5425.448701013.42890-1.252202.960701.44050K562PPP1R8
RRP15ENSG00000067533.51670.314501012.045900.722706.836005.65640K562PRPF8
RRP15ENSG00000067533.5499.72720727.68760-0.542202.308601.48850K562PSIP1
RRP15ENSG00000067533.51360.20700847.531700.6824010.395409.16620K562PTBP1
RRP15ENSG00000067533.5375.29490649.98370-0.792405.153404.44040K562PUS1
RRP15ENSG00000067533.5396.55950633.19190-0.675106.928106.01760K562RBM15
RRP15ENSG00000067533.5374.36580557.19890-0.573703.811302.21180K562RBM25
RRP15ENSG00000067533.5324.44470663.61480-1.032405.846304.39990K562RCC2
RRP15ENSG00000067533.5574.46610336.095700.773203.338302.22940K562RPS3
RRP15ENSG00000067533.51368.16780808.535800.7588011.276009.19770K562SAFB
RRP15ENSG00000067533.51154.19130835.922000.465304.067702.28120K562SDAD1
RRP15ENSG00000067533.5289.91780779.44290-1.426803.296501.95180K562SF1
RRP15ENSG00000067533.5969.541701278.00760-0.398505.021903.94970K562SF3A3
RRP15ENSG00000067533.5896.282001321.37510-0.560004.796103.49000K562SF3B1
RRP15ENSG00000067533.51107.20870830.849600.414203.863203.03380K562SRSF1
RRP15ENSG00000067533.5499.14750784.64000-0.652606.418004.70640K562SRSF5
RRP15ENSG00000067533.5709.427701061.50000-0.581408.504106.44940K562SRSF7
RRP15ENSG00000067533.5612.05920880.40150-0.524506.096604.08250K562SSB
RRP15ENSG00000067533.5396.024101070.44050-1.434503.483001.82260K562SUPT6H
RRP15ENSG00000067533.51844.68890910.153101.0191013.0942011.31000K562SYNCRIP
RRP15ENSG00000067533.5567.64630811.13920-0.515004.790403.66850K562TIA1
RRP15ENSG00000067533.5575.59040795.89700-0.467503.566102.29510K562TRA2A
RRP15ENSG00000067533.51127.903201598.15750-0.502803.633002.16850K562TROVE2
RRP15ENSG00000067533.5671.494701037.33320-0.627402.313301.39060K562UCHL5
RRP15ENSG00000067533.5907.402601373.42330-0.598006.175705.15270K562UPF1
RRP15ENSG00000067533.5366.45300658.87010-0.846404.573802.75510K562UTP18
RRP15ENSG00000067533.5758.944301175.20520-0.630802.434101.61110K562WDR3
RRP15ENSG00000067533.51507.773901222.006200.303103.930802.93410K562WDR43
RRP15ENSG00000067533.51367.76290718.618500.928405.928903.39830K562XRCC6
RRP15ENSG00000067533.51215.410502013.37440-0.728202.191101.43400K562ZC3H8
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for RRP15 is not available on ENCORE database.





5 RBPs can affect the splicing of RRP15 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SERRP15ENSG00000067533.5chr1+218478327218478467218475635218475901218480772218480974-0.074000.000010.00017excludedK562AQR
SERRP15ENSG00000067533.5chr1+218480772218480974218475635218475901218504289218511325-0.199000.000020.00368excludedK562SUPV3L1
SERRP15ENSG00000067533.5chr1+218478369218478467218475635218475901218480772218480974-0.135000.000110.00269excludedK562PUS1
SERRP15ENSG00000067533.5chr1+218478369218478467218475635218475901218480772218480974-0.066000.000280.02680excludedK562HNRNPUL1
SERRP15ENSG00000067533.5chr1+218478369218478467218475635218475901218480772218480974-0.097000.002500.05570excludedK562AGGF1

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for RRP15 is not avaliable on ENCORE database.