PLSCR1

General Information

Gene Name       : PLSCR1
Gene ID             : ENSG00000188313.12
Essential Gene : No

Functions

Localization

Domains (AlphaFold: PLSCR1)


Antibody Validation


Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878PLSCR1ENSG00000188313.1225.5229.0427.28ENCSR000AEF
HepG2PLSCR1ENSG00000188313.1217.6926.2021.95ENCSR985KAT
K562PLSCR1ENSG00000188313.1243.9850.7847.38ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for PLSCR1 is not avaliable on ENCORE database.



Proteins bound to RNA

  • PLSCR1 RNA is bound by 15 proteins.  







eCLIP assay for PLSCR1 is not avaliable on ENCORE database.





15 proteins are bound to PLSCR1 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr3146234874146234948-3'-UTR,CDS,intron-Distal,intron-Proximal3.979433.06853K562LIN28B
chr3146239456146239493-3'-UTR,CDS,intron-Distal,intron-Proximal4.044883.86978K562YBX3
chr3146239262146239347-3'-UTR,CDS,intron-Distal,intron-Proximal4.763654.58968K562PRPF8
chr3146234758146234815-3'-UTR,CDS,intron-Distal,intron-Proximal5.372964.02817HepG2PRPF8
chr3146233723146233830-3'-UTR,intron-Distal,intron-Proximal4.2199933.24522K562PUM2
chr3146234730146234814-3'-UTR,CDS,intron-Distal,intron-Proximal3.303964.48980K562PRPF8
chr3146234912146234954-3'-UTR,CDS,intron-Distal,intron-Proximal4.261623.45943HepG2BCLAF1
chr3146239409146239456-3'-UTR,CDS,intron-Distal,intron-Proximal3.713393.01531K562YBX3
chr3146239619146239680-3'-UTR,CDS,intron-Distal,intron-Proximal4.220615.16762K562YBX3
chr3146239286146239389-3'-UTR,CDS,intron-Distal,intron-Proximal4.543178.85766HepG2BCLAF1
chr3146233610146233688-3'-UTR,intron-Distal,intron-Proximal4.7772016.45754K562PUM2
chr3146262264146262375-5'-UTR,intron-Distal,intron-Proximal3.390813.64037HepG2NCBP2
chr3146262244146262375-5'-UTR,intron-Distal,intron-Proximal3.094213.01245K562SRSF1
chr3146262322146262408-5'-UTR,intron-Distal,intron-Proximal4.568964.82934K562RBM15
chr3146262202146262259-5'-UTR,intron-Distal3.521533.09957HepG2AQR
chr3146262253146262306-5'-UTR,intron-Distal4.302676.71767K562DDX3X
chr3146262165146262223-intron-Distal3.978455.39582HepG2RBM22
chr3146262025146262118-intron-Distal3.422543.74491K562CSTF2T
chr3146254183146254274-intron-Distal,intron-Proximal4.304103.20552HepG2KHSRP
chr3146253204146253310-intron-Distal3.398244.98593K562KHSRP
chr3146240134146240150-intron-Distal4.568153.86413K562AGGF1
chr3146262076146262228-intron-Distal3.912386.04229K562RBM15
chr3146254181146254296-intron-Distal,intron-Proximal3.421175.17040K562KHSRP
chr3146246081146246174-intron-Distal3.770075.95946K562KHSRP
chr3146262024146262190-intron-Distal3.662323.55447K562FUS
chr3146240150146240200-intron-Distal4.018384.89304K562AGGF1
chr3146254366146254409-intron-Distal,intron-Proximal3.790804.52210K562KHSRP
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for PLSCR1 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for PLSCR1 is not available on ENCORE database.

  • 102 RBPs can affect the levels of PLSCR1.  








The Knockdown/knockout RNA-Seq assay for PLSCR1 is not available on ENCORE database.





102 RBPs can affect the gene expression of PLSCR1 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
PLSCR1ENSG00000188313.8555.59440321.598300.788707.124405.49280HepG2AATF
PLSCR1ENSG00000188313.8342.45570544.10750-0.668004.306103.15000HepG2ABCF1
PLSCR1ENSG00000188313.8255.73910425.21310-0.733505.412404.08470HepG2ADAR
PLSCR1ENSG00000188313.8488.03150699.90860-0.520202.929202.38370HepG2AKAP1
PLSCR1ENSG00000188313.8818.34770579.144900.498702.875202.07590HepG2ASCC1
PLSCR1ENSG00000188313.8269.92910398.60140-0.562402.456201.57360HepG2BCCIP
PLSCR1ENSG00000188313.8257.41200345.92510-0.426402.030801.51170HepG2BOP1
PLSCR1ENSG00000188313.8547.72100407.659100.426002.806801.56530HepG2BUD13
PLSCR1ENSG00000188313.8970.39290688.584700.494802.914801.91270HepG2CCAR1
PLSCR1ENSG00000188313.8395.72210550.21810-0.475502.134601.44980HepG2CIRBP
PLSCR1ENSG00000188313.8487.55180833.81890-0.774204.943603.91620HepG2CNOT7
PLSCR1ENSG00000188313.8594.62260448.086500.408102.632901.55400HepG2CPSF7
PLSCR1ENSG00000188313.8929.77980607.313800.614308.997107.96140HepG2CELF1
PLSCR1ENSG00000188313.8259.38090355.12920-0.453302.200401.58840HepG2DDX21
PLSCR1ENSG00000188313.8629.24110391.896100.683002.874302.08780HepG2DDX55
PLSCR1ENSG00000188313.8206.54050436.44830-1.0794010.401908.59290HepG2DDX5
PLSCR1ENSG00000188313.8360.12490575.84460-0.677204.498903.72720HepG2DDX6
PLSCR1ENSG00000188313.8290.19960412.96280-0.509003.143402.10040HepG2DHX30
PLSCR1ENSG00000188313.8249.19310350.46170-0.492001.895401.31800HepG2DKC1
PLSCR1ENSG00000188313.8343.35580424.40590-0.305701.955301.38920HepG2DNAJC2
PLSCR1ENSG00000188313.8251.48890466.40640-0.891107.043805.64320HepG2EEF2
PLSCR1ENSG00000188313.8265.91230388.80620-0.548103.127501.95030HepG2EFTUD2
PLSCR1ENSG00000188313.8372.97860553.72030-0.570103.097402.47110HepG2EIF2S1
PLSCR1ENSG00000188313.8241.68130335.19140-0.471902.665901.60450HepG2EIF3G
PLSCR1ENSG00000188313.8290.94180611.99700-1.072807.508806.45550HepG2EIF4A3
PLSCR1ENSG00000188313.8426.59170595.72940-0.481802.222901.60270HepG2EIF4B
PLSCR1ENSG00000188313.8452.35010617.11770-0.448102.834202.01090HepG2EIF4G2
PLSCR1ENSG00000188313.8564.72220794.51960-0.492502.756502.15680HepG2ETF1
PLSCR1ENSG00000188313.8208.85210332.33140-0.670104.339303.36720HepG2FUBP3
PLSCR1ENSG00000188313.8444.05420607.86400-0.453002.381901.55900HepG2G3BP2
PLSCR1ENSG00000188313.8222.42210337.10100-0.599903.466202.45010HepG2GEMIN5
PLSCR1ENSG00000188313.8318.66440445.45620-0.483202.840401.80650HepG2GNB2L1
PLSCR1ENSG00000188313.8264.04340359.97850-0.447101.919501.38010HepG2GPKOW
PLSCR1ENSG00000188313.81112.39710771.776500.527303.088901.90880HepG2GRSF1
PLSCR1ENSG00000188313.8444.06820349.746700.344402.322001.42150HepG2HDGF
PLSCR1ENSG00000188313.8221.54910432.25750-0.964308.484907.44470HepG2HNRNPA1
PLSCR1ENSG00000188313.8794.72320600.105900.405103.493402.46070HepG2HNRNPA2B1
PLSCR1ENSG00000188313.8251.22920480.81700-0.936508.429507.27200HepG2HNRNPC
PLSCR1ENSG00000188313.8282.92160379.07550-0.422102.247501.38920HepG2HNRNPM
PLSCR1ENSG00000188313.8576.10670812.78890-0.496502.647401.36320HepG2ILF3
PLSCR1ENSG00000188313.8925.54030566.018300.709304.606402.98890HepG2KRR1
PLSCR1ENSG00000188313.8406.71010726.97440-0.837906.758905.44670HepG2LARP4
PLSCR1ENSG00000188313.8396.40160617.47890-0.639404.147503.34710HepG2MAGOH
PLSCR1ENSG00000188313.8265.41410635.62560-1.259909.019607.91430HepG2NCBP2
PLSCR1ENSG00000188313.81127.27390647.459600.7999014.1875012.52210HepG2NOL12
PLSCR1ENSG00000188313.8421.27640761.94760-0.854905.319604.06000HepG2PABPC1
PLSCR1ENSG00000188313.8333.73310566.19660-0.762604.959904.00350HepG2PABPC4
PLSCR1ENSG00000188313.8335.33730618.07610-0.882209.563308.54630HepG2PUF60
PLSCR1ENSG00000188313.8824.92300655.644300.331202.058501.47440HepG2PUM2
PLSCR1ENSG00000188313.8483.66650373.104400.374302.771402.15510HepG2PUS1
PLSCR1ENSG00000188313.8203.37290396.80410-0.964304.851403.93240HepG2RAVER1
PLSCR1ENSG00000188313.8592.15910449.479000.397602.855001.98530HepG2RBM15
PLSCR1ENSG00000188313.8385.04950664.08450-0.786308.961908.15150HepG2RBM22
PLSCR1ENSG00000188313.8408.16910577.11400-0.499703.768602.99020HepG2RBM25
PLSCR1ENSG00000188313.81133.92930805.158700.493902.893001.31750HepG2RBM47
PLSCR1ENSG00000188313.8270.44230427.44860-0.660403.635702.41870HepG2RCC2
PLSCR1ENSG00000188313.8337.20920653.43650-0.9544013.7359012.70140HepG2NELFE
PLSCR1ENSG00000188313.8251.19540368.41350-0.552503.392102.71960HepG2RPS19
PLSCR1ENSG00000188313.8353.11240485.43510-0.459202.889002.07330HepG2RPS2
PLSCR1ENSG00000188313.8479.60990836.78080-0.803006.418705.20410HepG2RPS3A
PLSCR1ENSG00000188313.8282.17300425.51280-0.592602.929102.23390HepG2SF3A3
PLSCR1ENSG00000188313.8398.12560592.68490-0.574006.011105.03870HepG2SLBP
PLSCR1ENSG00000188313.8333.92180496.02090-0.570905.763504.88930HepG2SMN1
PLSCR1ENSG00000188313.8682.36710378.339000.850805.553604.43550HepG2SNRNP70
PLSCR1ENSG00000188313.8442.65810638.05900-0.527505.408704.80320HepG2SRSF1
PLSCR1ENSG00000188313.8468.31400347.619500.429903.283202.53370HepG2SRSF7
PLSCR1ENSG00000188313.8641.07420519.094600.304402.387001.86670HepG2SRSF9
PLSCR1ENSG00000188313.8278.43510651.28960-1.2260014.8952013.89520HepG2SSB
PLSCR1ENSG00000188313.81260.33710564.373701.1590016.2027013.54470HepG2SSRP1
PLSCR1ENSG00000188313.8248.19790390.14530-0.652503.101002.38910HepG2SUPV3L1
PLSCR1ENSG00000188313.8448.88390573.51110-0.353502.529201.99010HepG2TAF15
PLSCR1ENSG00000188313.8306.88850464.07490-0.596604.780304.16000HepG2TIAL1
PLSCR1ENSG00000188313.8614.62890398.571100.624803.511301.86950HepG2TRA2A
PLSCR1ENSG00000188313.8338.22350468.26530-0.469303.794503.15650HepG2TRIM56
PLSCR1ENSG00000188313.8229.35150357.30320-0.639602.386901.46060HepG2UPF2
PLSCR1ENSG00000188313.8567.83480387.880200.549805.288603.88240HepG2UTP18
PLSCR1ENSG00000188313.8447.34450749.47880-0.744505.447003.90270HepG2XPO5
PLSCR1ENSG00000188313.8304.75360436.46360-0.518202.398001.41270HepG2XRCC6
PLSCR1ENSG00000188313.8232.28430384.05470-0.725404.027703.16140HepG2XRN2
PLSCR1ENSG00000188313.81043.628901586.07920-0.6039012.2051011.10700K562AGGF1
PLSCR1ENSG00000188313.81379.060001742.71290-0.337603.051902.00610K562AKAP8
PLSCR1ENSG00000188313.8876.423701650.35080-0.9131016.2787014.45110K562AKAP8L
PLSCR1ENSG00000188313.8702.199101220.56640-0.7976010.529609.49510K562AQR
PLSCR1ENSG00000188313.81227.109601731.54630-0.496807.910306.24460K562ATP5C1
PLSCR1ENSG00000188313.82106.828001716.770700.295302.860301.87070K562CELF1
PLSCR1ENSG00000188313.81464.997801860.90220-0.345103.003501.47400K562DDX19B
PLSCR1ENSG00000188313.8508.52670700.79780-0.462703.862202.60420K562DDX3X
PLSCR1ENSG00000188313.8472.62940700.69590-0.568103.182801.80360K562EEF2
PLSCR1ENSG00000188313.81096.73190881.597700.314902.934002.19680K562EIF2S2
PLSCR1ENSG00000188313.8539.83780725.05180-0.425602.247301.32470K562EIF3D
PLSCR1ENSG00000188313.8519.69630667.36270-0.360802.953802.13210K562EIF3G
PLSCR1ENSG00000188313.8579.68880732.14970-0.336902.201701.46620K562EIF4A3
PLSCR1ENSG00000188313.81477.692601174.736600.330902.568401.83810K562GRSF1
PLSCR1ENSG00000188313.81794.353301077.910900.7351010.155208.65710K562HSPD1
PLSCR1ENSG00000188313.81103.632301751.56260-0.666406.736205.31770K562KIF1C
PLSCR1ENSG00000188313.81303.880201676.57260-0.362702.437001.44970K562MAK16
PLSCR1ENSG00000188313.81093.31500870.785900.328203.427502.53170K562MTPAP
PLSCR1ENSG00000188313.8859.261801375.33110-0.678605.696704.27100K562NAA15
PLSCR1ENSG00000188313.8596.309001266.11780-1.086303.148902.07260K562PABPN1
PLSCR1ENSG00000188313.8615.97550860.79540-0.482804.015502.83200K562PCBP2
PLSCR1ENSG00000188313.81120.78640902.602300.312202.131401.41580K562PPIG
PLSCR1ENSG00000188313.81216.692501523.31330-0.324202.367501.61370K562PUF60
PLSCR1ENSG00000188313.81897.209701587.553300.257002.565401.63890K562PUM2
PLSCR1ENSG00000188313.8917.197601636.95630-0.8357012.0874010.99870K562PUS1
PLSCR1ENSG00000188313.8851.120501594.75090-0.9059020.7237019.05100K562RBM15
PLSCR1ENSG00000188313.8612.84590901.38410-0.556605.322404.11190K562RBM22
PLSCR1ENSG00000188313.8496.48880657.22240-0.404603.998302.10940K562RPS10
PLSCR1ENSG00000188313.8502.41960668.00950-0.411003.257202.32780K562SF3B4
PLSCR1ENSG00000188313.8722.16490921.33540-0.351402.740802.03650K562SRSF1
PLSCR1ENSG00000188313.8751.69930589.368200.350902.247401.31690K562SRSF4
PLSCR1ENSG00000188313.8716.05210932.52920-0.381102.652001.95730K562TARDBP
PLSCR1ENSG00000188313.8380.55980622.80530-0.710705.436103.80070K562U2AF1
PLSCR1ENSG00000188313.8411.95580643.05750-0.642506.611505.37730K562U2AF2
PLSCR1ENSG00000188313.8917.036901659.43890-0.855605.407903.41650K562UTP18
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for PLSCR1 is not available on ENCORE database.





25 RBPs can affect the splicing of PLSCR1 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEPLSCR1ENSG00000188313.8chr3-1462557821462558311462543261462543521462622531462623340.355000.000090.00280includedK562SRSF1
SEPLSCR1ENSG00000188313.8chr3-146254326146254352146251256146251337146262253146262357-0.450000.000000.00000excludedK562SF3B4
SEPLSCR1ENSG00000188313.8chr3-146239330146239840146234792146234954146251256146251337-0.116000.006300.08842excludedK562SF3B4
SEPLSCR1ENSG00000188313.8chr3-1462543261462543521462512561462513371462622531462623570.073000.005850.08554includedHepG2U2AF1
SEPLSCR1ENSG00000188313.8chr3-1462543261462543521462512561462513371462622531462623420.147000.000000.00004includedHepG2DDX59
SEPLSCR1ENSG00000188313.8chr3-1462543261462543521462512561462513371462622531462623570.056000.000760.05931includedHepG2TBRG4
SEPLSCR1ENSG00000188313.8chr3-1462543261462543521462512561462513371462622531462623570.144000.000070.00153includedHepG2U2AF2
SEPLSCR1ENSG00000188313.8chr3-146254326146254352146251256146251366146262253146262357-0.077000.002240.02410excludedK562AQR
SEPLSCR1ENSG00000188313.8chr3-146243391146243434146239619146239840146251256146251337-0.112000.000410.00802excludedK562PUS1
SEPLSCR1ENSG00000188313.8chr3-1462543261462543521462512561462513371462622531462623420.121000.000580.03054includedHepG2SFPQ
SEPLSCR1ENSG00000188313.8chr3-1462543261462543521462512561462513371462622531462623420.168000.000000.00073includedHepG2TIAL1
SEPLSCR1ENSG00000188313.8chr3-146243391146243434146239619146239840146251256146251337-0.124000.002720.07147excludedK562UTP18
SEPLSCR1ENSG00000188313.8chr3-1462543261462543521462512561462513371462622531462623570.178000.000000.00001includedK562CPSF6
SEPLSCR1ENSG00000188313.8chr3-146254326146254352146251256146251337146262253146262357-0.155000.000200.01157excludedK562SF3B1
SEPLSCR1ENSG00000188313.8chr3-1462464001462466181462433911462434341462512561462513370.161000.001670.06583includedK562HNRNPK
SEPLSCR1ENSG00000188313.8chr3-1462543261462543521462512561462513371462622531462623570.120000.000320.01790includedHepG2HNRNPU
SEPLSCR1ENSG00000188313.8chr3-146246400146246618146243391146243434146251256146251337-0.068000.003030.04694excludedK562HNRNPC
SEPLSCR1ENSG00000188313.8chr3-146239330146239488146234792146234954146243391146243434-0.109000.004170.06034excludedK562HNRNPC
A3SSPLSCR1ENSG00000188313.8chr3-1462512561462513661462512561462513371462543261462543840.113000.000020.00016longerK562AQR
RIPLSCR1ENSG00000188313.8chr3-1462393301462398401462393301462394921462396191462398400.072000.016440.09100includedHepG2U2AF2
RIPLSCR1ENSG00000188313.8chr3-1462393301462398401462393301462394921462396191462398400.052000.000570.08167includedK562IGF2BP2
RIPLSCR1ENSG00000188313.8chr3-1462393301462398401462393301462394921462396191462398400.067000.000260.01321includedHepG2TIA1
RIPLSCR1ENSG00000188313.8chr3-1462393301462398401462393301462394921462396191462398400.102000.000200.02281includedK562PHF6
RIPLSCR1ENSG00000188313.8chr3-1462393301462398401462393301462394921462396191462398400.055000.004070.04683includedHepG2PCBP1
RIPLSCR1ENSG00000188313.8chr3-1462393301462398401462393301462394921462396191462398400.066000.000490.01179includedHepG2G3BP1
RIPLSCR1ENSG00000188313.8chr3-1462393301462398401462393301462394921462396191462398400.104000.000000.00007includedHepG2KHSRP
RIPLSCR1ENSG00000188313.8chr3-1462393301462398401462393301462394921462396191462398400.102000.000040.00094includedHepG2RBM22
RIPLSCR1ENSG00000188313.8chr3-1462393301462398401462393301462394921462396191462398400.073000.000140.00585includedHepG2PTBP1
MXEPLSCR1ENSG00000188313.8chr3-1462393301462398401462433911462434341462347921462349541462512561462513370.207000.000010.000301includedK562HNRNPC
MXEPLSCR1ENSG00000188313.8chr3-1462396191462398401462433911462434341462393301462394921462512561462513370.116000.006180.081251includedK562HNRNPC
MXEPLSCR1ENSG00000188313.8chr3-1462396191462397681462433911462434341462393301462394921462512561462513370.167000.000520.025591includedK562TAF15
MXEPLSCR1ENSG00000188313.8chr3-1462396191462398401462433911462434341462393301462394921462512561462513370.114000.003890.090121includedK562TAF15
MXEPLSCR1ENSG00000188313.8chr3-146239619146239840146243391146243434146239330146239492146251256146251337-0.089000.001720.077712includedK562HNRNPK

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for PLSCR1 is not avaliable on ENCORE database.