PC

General Information

Gene Name : PC
Gene ID : ENSG00000173599.13
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: PC)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	PC	ENSG00000173599.13	0.29	2.85	1.57	ENCSR000AEF
HepG2	PC	ENSG00000173599.13	43.59	21.94	32.77	ENCSR985KAT
K562	PC	ENSG00000173599.13	14.99	9.20	12.09	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for PC is not avaliable on ENCORE database.

Proteins bound to RNA

PC RNA is bound by 25 proteins.

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eCLIP assay for PC is not avaliable on ENCORE database.

25 proteins are bound to PC RNA:

Show entries

Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr11	66620539	66620615	-	intron-Distal,intron-Proximal	4.97985	25.29358	HepG2	HNRNPK
chr11	66687200	66687274	-	intron-Distal	6.23193	15.99078	K562	LSM11
chr11	66617635	66617715	-	CDS,intron-Distal,intron-Proximal	4.19647	15.11890	HepG2	PRPF8
chr11	66626849	66626908	-	intron-Distal	5.76533	14.40554	HepG2	CSTF2T
chr11	66620501	66620694	-	intron-Distal,intron-Proximal	4.34277	13.34347	HepG2	DDX59
chr11	66638354	66638419	-	CDS,intron-Distal,intron-Proximal	5.15315	13.00415	HepG2	EFTUD2
chr11	66627063	66627159	-	intron-Distal	4.14318	12.85465	HepG2	CSTF2T
chr11	66687274	66687300	-	intron-Distal	5.81124	12.47021	K562	LSM11
chr11	66653580	66653703	-	intron-Distal	5.59504	12.06030	HepG2	PCBP2
chr11	66637804	66637900	-	CDS,intron-Distal	4.71285	11.68917	HepG2	PPIG
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 95 entries

eCLIP assay for PC is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for PC is not available on ENCORE database.
109 RBPs can affect the levels of PC.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for PC is not available on ENCORE database.

109 RBPs can affect the gene expression of PC :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
PC	ENSG00000173599.9	604.88130	2083.85710	-1.78450	50.64830	48.97170	HepG2	RBM22
PC	ENSG00000173599.9	1796.51870	858.57030	1.06510	35.97790	33.89780	HepG2	HNRNPF
PC	ENSG00000173599.9	1455.58440	771.25260	0.91620	25.35570	23.86230	HepG2	TRIM56
PC	ENSG00000173599.9	1546.56040	843.50250	0.87450	23.92690	22.27450	HepG2	SRSF7
PC	ENSG00000173599.9	1721.06840	845.45090	1.02540	23.40490	21.54980	HepG2	IGF2BP1
PC	ENSG00000173599.9	666.15290	1636.38200	-1.29660	23.32610	21.15170	HepG2	FUBP3
PC	ENSG00000173599.9	1349.11080	2353.58050	-0.80280	22.08510	21.02310	HepG2	SRFBP1
PC	ENSG00000173599.9	2720.53300	1271.85820	1.09690	23.14990	21.02300	HepG2	EIF4G2
PC	ENSG00000173599.9	2171.69990	1345.83140	0.69020	21.77890	20.06080	HepG2	DAZAP1
PC	ENSG00000173599.9	2357.11820	1273.90160	0.88770	17.74860	16.41740	HepG2	PUF60
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 130 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for PC is not available on ENCORE database.

4 RBPs can affect the splicing of PC :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
SE	PC	ENSG00000173599.9	chr11	-	66620709	66620854	66620217	66620307	66631244	66631427	-0.16100	0.00000	0.00001	excluded	HepG2	U2AF1
SE	PC	ENSG00000173599.9	chr11	-	66620709	66620854	66620217	66620307	66631244	66631427	-0.38900	0.00000	0.00000	excluded	HepG2	HNRNPK
A3SS	PC	ENSG00000173599.9	chr11	-	66619260	66619417	66619260	66619322	66619909	66620109	-0.16500	0.00000	0.00353	shorter	HepG2	SRSF9
SE	PC	ENSG00000173599.9	chr11	-	66620709	66620854	66620217	66620307	66631244	66631427	-0.08400	0.00256	0.03088	excluded	HepG2	U2AF2

Showing 1 to 4 of 4 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

PC

General Information

Functions

Localization

Domains (AlphaFold: PC)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for PC is not avaliable on ENCORE database.

25 proteins are bound to PC RNA:

eCLIP assay for PC is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for PC is not available on ENCORE database.

109 RBPs can affect the gene expression of PC :

The Knockdown/knockout RNA-Seq assay for PC is not available on ENCORE database.

4 RBPs can affect the splicing of PC :

The Knockdown/knockout RNA-Seq assay for PC is not avaliable on ENCORE database.