PAQR3

General Information

Gene Name       : PAQR3
Gene ID             : ENSG00000163291.14
Essential Gene : No

Functions

Localization

Domains (AlphaFold: PAQR3)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878PAQR3ENSG00000163291.146.914.765.83ENCSR000AEF
HepG2PAQR3ENSG00000163291.146.3610.298.32ENCSR985KAT
K562PAQR3ENSG00000163291.1421.4822.0821.78ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for PAQR3 is not avaliable on ENCORE database.



Proteins bound to RNA
  • PAQR3 RNA is bound by 9 proteins.  







eCLIP assay for PAQR3 is not avaliable on ENCORE database.





9 proteins are bound to PAQR3 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr47984496579845050-3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal3.692763.76553K562PRPF8
chr47984039179840450-3'-UTR,intron-Distal3.394965.59934K562FAM120A
chr47985143279851493-3'-UTR,CDS,intron-Distal,intron-Proximal3.664187.42133K562SF3B4
chr47984000579840032-3'-UTR,intron-Distal3.338863.11711K562FAM120A
chr47985141779851488-3'-UTR,CDS,intron-Distal,intron-Proximal3.380034.84256K562U2AF2
chr47986038379860441-5'-UTR,intron-Distal,intron-Proximal3.799213.70637K562DDX3X
chr47986037579860437-5'-UTR,CDS,intron-Distal,intron-Proximal5.5280113.92787HepG2DDX3X
chr47986030179860380-5'-UTR,CDS,intron-Distal,intron-Proximal3.556893.58206K562LIN28B
chr47986043779860497-5'-UTR,intron-Distal,intron-Proximal4.105279.42102HepG2DDX3X
chr47986010979860195-CDS,intron-Distal4.484568.30573K562AQR
chr47985631579856361-CDS,intron-Distal,intron-Proximal3.021747.00702K562YBX3
chr47986006579860130-intron-Distal3.960113.21228K562TIA1
chr47985618579856255-intron-Distal,intron-Proximal3.712075.21358K562TIA1
chr47985999479860065-intron-Distal3.334663.76553K562PRPF8
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for PAQR3 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for PAQR3 is not available on ENCORE database.

  • 94 RBPs can affect the levels of PAQR3.  








The Knockdown/knockout RNA-Seq assay for PAQR3 is not available on ENCORE database.





94 RBPs can affect the gene expression of PAQR3 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
PAQR3ENSG00000163291.10359.39090257.491400.480902.498301.47510HepG2AATF
PAQR3ENSG00000163291.10285.06100411.47640-0.529502.513901.61430HepG2ABCF1
PAQR3ENSG00000163291.10436.22570351.109200.313101.961201.43270HepG2ACO1
PAQR3ENSG00000163291.10239.74900383.03090-0.675904.479503.24860HepG2ADAR
PAQR3ENSG00000163291.10712.18120457.581000.638104.255403.61520HepG2AKAP1
PAQR3ENSG00000163291.10232.53160378.59660-0.703204.366403.38760HepG2ASCC1
PAQR3ENSG00000163291.10978.65540556.748700.8137014.7815013.41740HepG2AUH
PAQR3ENSG00000163291.10226.25130401.60850-0.827902.472201.81710HepG2CPSF6
PAQR3ENSG00000163291.10187.97490392.79040-1.0632011.566709.56900HepG2YBX3
PAQR3ENSG00000163291.10143.16460256.44650-0.841002.480501.45830HepG2CSTF2
PAQR3ENSG00000163291.10699.15920529.081100.402001.884601.33580HepG2CELF1
PAQR3ENSG00000163291.10447.90370568.97160-0.345202.993002.22590HepG2DAZAP1
PAQR3ENSG00000163291.1074.98150284.09050-1.9217019.9920018.37220HepG2DDX21
PAQR3ENSG00000163291.10688.62290407.965600.755206.801705.65390HepG2DDX55
PAQR3ENSG00000163291.10225.36790358.25660-0.668704.231902.98960HepG2DDX5
PAQR3ENSG00000163291.10154.07420335.91700-1.1245011.169009.99720HepG2DKC1
PAQR3ENSG00000163291.10232.28730385.69840-0.731606.319905.29160HepG2DNAJC21
PAQR3ENSG00000163291.10155.97020361.94450-1.214509.920408.83930HepG2EIF2S1
PAQR3ENSG00000163291.10302.01220399.95910-0.405201.832401.30790HepG2EIF4A3
PAQR3ENSG00000163291.10246.58980356.53780-0.531902.539601.49320HepG2ESF1
PAQR3ENSG00000163291.10551.74830343.098700.685305.086503.95720HepG2EWSR1
PAQR3ENSG00000163291.101139.52560415.523101.4553022.2021020.39940HepG2FIP1L1
PAQR3ENSG00000163291.10235.85720402.24650-0.770202.407401.46650HepG2FTO
PAQR3ENSG00000163291.10235.34820397.52280-0.756205.100103.87860HepG2G3BP2
PAQR3ENSG00000163291.10120.26120455.32100-1.920707.498506.47510HepG2GPKOW
PAQR3ENSG00000163291.10580.67030374.128900.634102.949001.51980HepG2HLTF
PAQR3ENSG00000163291.10237.81310389.39340-0.711404.960004.12860HepG2HNRNPA1
PAQR3ENSG00000163291.10296.78080433.12450-0.545403.292202.54160HepG2HNRNPC
PAQR3ENSG00000163291.10303.99150468.28850-0.623405.895804.90110HepG2HNRNPF
PAQR3ENSG00000163291.10351.89830518.31370-0.558705.817904.87090HepG2HNRNPL
PAQR3ENSG00000163291.10167.15040434.51520-1.378305.104904.27590HepG2HNRNPLL
PAQR3ENSG00000163291.10271.65310461.12970-0.763407.093205.98170HepG2IGF2BP1
PAQR3ENSG00000163291.10184.82680380.53430-1.041908.348107.24100HepG2IGF2BP2
PAQR3ENSG00000163291.10515.38860393.126200.390602.393701.34370HepG2LARP7
PAQR3ENSG00000163291.10260.27130403.78060-0.633603.718802.95800HepG2MAGOH
PAQR3ENSG00000163291.10442.90900282.494200.648702.707901.66680HepG2METAP2
PAQR3ENSG00000163291.10264.22910443.00380-0.745502.308001.42800HepG2MTPAP
PAQR3ENSG00000163291.10257.56910415.57600-0.690204.226003.44890HepG2NCBP2
PAQR3ENSG00000163291.10163.03020385.23260-1.240604.097403.19220HepG2NSUN2
PAQR3ENSG00000163291.10362.33720622.08910-0.779803.622002.59680HepG2PABPC1
PAQR3ENSG00000163291.10248.97680383.75920-0.624204.976004.01580HepG2PPIL4
PAQR3ENSG00000163291.10172.78740290.43730-0.749205.762904.68890HepG2PRPF4
PAQR3ENSG00000163291.10450.72470359.380400.326602.065201.57990HepG2PTBP1
PAQR3ENSG00000163291.10327.66970538.54360-0.716806.605005.73790HepG2PUF60
PAQR3ENSG00000163291.10252.63380357.62780-0.501403.530402.85320HepG2PUS1
PAQR3ENSG00000163291.10492.95310389.167800.341002.054301.50450HepG2QKI
PAQR3ENSG00000163291.101030.42870356.809901.5299014.9635013.44870HepG2RAVER1
PAQR3ENSG00000163291.10536.43890412.377200.379302.532501.70900HepG2RBM15
PAQR3ENSG00000163291.101570.34400534.265601.5554023.7536022.53380HepG2RBM22
PAQR3ENSG00000163291.10366.37810504.47380-0.461403.020602.31090HepG2RPLP0
PAQR3ENSG00000163291.10206.01350350.42380-0.766403.931502.80790HepG2RPS10
PAQR3ENSG00000163291.10299.79540437.20610-0.544302.978102.14910HepG2RPS2
PAQR3ENSG00000163291.10303.35790683.08670-1.171006.648905.41680HepG2RPS3A
PAQR3ENSG00000163291.10732.52130311.568701.2332015.4045013.81480HepG2RRP9
PAQR3ENSG00000163291.10223.59510383.16880-0.777107.530406.54360HepG2SAFB2
PAQR3ENSG00000163291.10390.53030649.22810-0.733303.355901.64750HepG2SBDS
PAQR3ENSG00000163291.10451.51260305.902400.561602.923702.22930HepG2SF3A3
PAQR3ENSG00000163291.10350.79620516.32630-0.557605.742104.79260HepG2SLBP
PAQR3ENSG00000163291.101761.48960603.436701.5454069.6945068.04820HepG2SRFBP1
PAQR3ENSG00000163291.101185.94920462.704301.357802.349701.43690HepG2SRSF3
PAQR3ENSG00000163291.10178.92520523.93180-1.5500028.4473027.19170HepG2SSB
PAQR3ENSG00000163291.10228.15720406.19090-0.832102.135301.53080HepG2SUPV3L1
PAQR3ENSG00000163291.10240.90530423.34160-0.813402.491401.79760HepG2TARDBP
PAQR3ENSG00000163291.10116.81660418.09290-1.8396027.7861026.50620HepG2TIAL1
PAQR3ENSG00000163291.10255.12930421.81560-0.725407.427206.57980HepG2TRIM56
PAQR3ENSG00000163291.10352.58220526.09200-0.577404.612803.45060HepG2TUFM
PAQR3ENSG00000163291.10177.81280372.12420-1.065402.606501.63330HepG2UPF2
PAQR3ENSG00000163291.10576.21810261.918601.1374018.0552016.72500HepG2UTP3
PAQR3ENSG00000163291.10554.20760392.358000.498202.424201.43290HepG2XRCC6
PAQR3ENSG00000163291.10139.86700399.84840-1.515404.936503.97590HepG2XRN2
PAQR3ENSG00000163291.10409.22610298.365600.455703.530402.93330HepG2ZNF622
PAQR3ENSG00000163291.101834.541101412.159500.377405.662204.89580K562AGGF1
PAQR3ENSG00000163291.101881.769101469.409800.356803.216502.51130K562AKAP8L
PAQR3ENSG00000163291.103040.797601733.710100.8105013.4433012.28860K562AQR
PAQR3ENSG00000163291.101866.395001317.988400.501802.624701.59590K562CNOT7
PAQR3ENSG00000163291.102974.725402417.736800.299003.300702.23520K562CELF1
PAQR3ENSG00000163291.101979.017201581.228500.323604.010302.93040K562DKC1
PAQR3ENSG00000163291.10913.627201206.97260-0.401705.105503.43620K562EIF2S1
PAQR3ENSG00000163291.10795.656801105.17310-0.474105.551904.43910K562EIF3G
PAQR3ENSG00000163291.10903.944901148.00890-0.344802.632401.83270K562EIF4A3
PAQR3ENSG00000163291.10798.974601033.84420-0.371802.561001.46440K562EIF4B
PAQR3ENSG00000163291.101835.637901272.266300.528802.165901.55140K562G3BP2
PAQR3ENSG00000163291.10958.730001580.83350-0.7215010.742809.22500K562GRSF1
PAQR3ENSG00000163291.10995.714701314.99690-0.401303.337402.16360K562HNRNPL
PAQR3ENSG00000163291.101968.499601559.432500.336002.815101.98130K562KIF1C
PAQR3ENSG00000163291.101148.012601424.74580-0.311602.699901.79000K562MATR3
PAQR3ENSG00000163291.101873.841501224.487200.613704.722103.47240K562NAA15
PAQR3ENSG00000163291.101269.40620982.136400.370102.375601.60650K562PCBP3
PAQR3ENSG00000163291.10975.99990753.310400.373502.079201.38460K562POLR2G
PAQR3ENSG00000163291.101116.61890896.906800.316002.161601.49490K562PRPF8
PAQR3ENSG00000163291.101138.781401386.97310-0.284402.332101.71540K562PTBP1
PAQR3ENSG00000163291.102838.603702281.975900.314803.522702.30840K562PUM1
PAQR3ENSG00000163291.102766.176801457.295100.9245016.8157015.51810K562PUS1
PAQR3ENSG00000163291.101794.288701419.878300.337503.830603.14960K562RBM15
PAQR3ENSG00000163291.10572.38440749.99030-0.389902.581301.62750K562RCC2
PAQR3ENSG00000163291.101101.799601399.69240-0.345202.516001.47930K562NELFE
PAQR3ENSG00000163291.10849.677901088.49310-0.357304.123702.20280K562RPS10
PAQR3ENSG00000163291.101192.59160929.458300.359502.193301.33760K562SF3B1
PAQR3ENSG00000163291.10938.720501359.66050-0.534506.444105.37640K562SRSF1
PAQR3ENSG00000163291.10775.91680991.10960-0.353102.664201.63730K562SRSF4
PAQR3ENSG00000163291.101049.79440861.305200.285402.491801.38520K562SRSF7
PAQR3ENSG00000163291.10958.54620755.620000.343102.842902.01050K562SYNCRIP
PAQR3ENSG00000163291.10887.991801376.14180-0.632007.116605.92710K562TARDBP
PAQR3ENSG00000163291.101050.043901327.42400-0.338203.060702.19160K562TIA1
PAQR3ENSG00000163291.10613.24110839.99220-0.453903.480902.39810K562TRIM56
PAQR3ENSG00000163291.101676.615101234.227400.441803.074901.91220K562U2AF1
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for PAQR3 is not available on ENCORE database.





24 RBPs can affect the splicing of PAQR3 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEPAQR3ENSG00000163291.10chr4-798562747985643779851323798514797986019379860592-0.332000.000170.06386excludedK562IGF2BP2
SEPAQR3ENSG00000163291.10chr4-798450107984510179841687798418357984767479847872-0.237000.000000.00000excludedK562SF3B4
SEPAQR3ENSG00000163291.10chr4-798562747985643779851323798514797986019379860548-0.453000.000060.00200excludedK562SF3B4
SEPAQR3ENSG00000163291.10chr4-798562747985643779851323798514797986019379860548-0.345000.000000.00389excludedK562XRN2
SEPAQR3ENSG00000163291.10chr4-798562747985643779851323798514797986019379860548-0.520000.000000.00017excludedHepG2U2AF1
SEPAQR3ENSG00000163291.10chr4-7984329479843575798416877984183579845010798451010.173000.000020.00110includedK562AKAP8L
SEPAQR3ENSG00000163291.10chr4-798562747985643779851323798514797986019379860548-0.301000.002020.04764excludedHepG2HNRNPK
SEPAQR3ENSG00000163291.10chr4-798450107984510179841687798418357984767479847872-0.232000.000000.00000excludedK562AQR
SEPAQR3ENSG00000163291.10chr4-798562747985643779851323798514797986019379860379-0.317000.000000.00000excludedK562AQR
SEPAQR3ENSG00000163291.10chr4-798562747985643779851323798514797986019379860592-0.348000.000110.01622excludedHepG2SRSF7
SEPAQR3ENSG00000163291.10chr4-798562747985633079851323798514797986019379860349-0.362000.000190.03742excludedK562DROSHA
SEPAQR3ENSG00000163291.10chr4-7984329479843575798416877984183579845010798451010.192000.000000.00003includedK562PUS1
SEPAQR3ENSG00000163291.10chr4-798439827984413779843294798435757984501079845101-0.106000.007840.08735excludedK562PUS1
SEPAQR3ENSG00000163291.10chr4-798562747985643779851323798514797986019379860548-0.422000.000000.00000excludedK562PUS1
SEPAQR3ENSG00000163291.10chr4-798562747985643779851323798514797986019379860548-0.268000.000180.04159excludedK562MTPAP
SEPAQR3ENSG00000163291.10chr4-7984329479843575798416877984183579845010798451010.148000.000030.00106includedK562U2AF1
SEPAQR3ENSG00000163291.10chr4-798450107984510179841687798418357984767479847872-0.097000.000410.01097excludedK562U2AF1
SEPAQR3ENSG00000163291.10chr4-798562747985643779851323798514797986019379860548-0.547000.000000.00000excludedK562U2AF1
SEPAQR3ENSG00000163291.10chr4-798562747985643779851323798514797986019379860592-0.265000.000160.03025excludedK562HNRNPM
SEPAQR3ENSG00000163291.10chr4-798562747985643779851323798514797986019379860548-0.355000.000050.00628excludedHepG2HNRNPL
SEPAQR3ENSG00000163291.10chr4-798562747985643779851323798514797986019379860548-0.385000.000000.00074excludedK562HNRNPL
SEPAQR3ENSG00000163291.10chr4-7984329479843575798416877984183579845010798451010.202000.000090.01177includedK562HNRNPUL1
SEPAQR3ENSG00000163291.10chr4-798562747985643779851323798514797986019379860592-0.241000.000010.00292excludedK562HNRNPUL1
SEPAQR3ENSG00000163291.10chr4-798562747985643779851323798514797986019379860548-0.335000.000040.00938excludedK562SRSF7
SEPAQR3ENSG00000163291.10chr4-798562747985643779851323798514797986019379860548-0.327000.000000.00010excludedK562UTP18
SEPAQR3ENSG00000163291.10chr4-7984329479843575798416877984183579845010798451010.167000.000010.00024includedK562U2AF2
SEPAQR3ENSG00000163291.10chr4-798439827984413779843294798435757984501079845101-0.205000.004370.06501excludedK562U2AF2
SEPAQR3ENSG00000163291.10chr4-798562747985643779851323798514797986019379860592-0.297000.000090.00547excludedK562TARDBP
SEPAQR3ENSG00000163291.10chr4-798562747985643779851323798514797986019379860548-0.344000.000010.00054excludedK562HNRNPU
SEPAQR3ENSG00000163291.10chr4-7984329479843575798416877984183579845010798451010.201000.000000.00007includedK562RBM15
SEPAQR3ENSG00000163291.10chr4-798562747985643779851323798514797986019379860548-0.235000.000130.00527excludedK562RBM15
SEPAQR3ENSG00000163291.10chr4-7984329479843575798416877984183579845010798451010.139000.000250.00948includedK562AGGF1
SEPAQR3ENSG00000163291.10chr4-798439827984413779843294798435757984501079845101-0.125000.003560.07211excludedK562AGGF1
SEPAQR3ENSG00000163291.10chr4-798562747985643779851323798514797986019379860548-0.349000.000000.00024excludedK562AGGF1
SEPAQR3ENSG00000163291.10chr4-798562747985643779851323798514797986019379860592-0.301000.000580.02620excludedK562SF3B1
SEPAQR3ENSG00000163291.10chr4-798562747985633079851323798514797986019379860349-0.400000.000040.01096excludedK562ZC3H8
SEPAQR3ENSG00000163291.10chr4-798562747985643779851323798514797986019379860592-0.206000.006320.08346excludedK562HNRNPC
A3SSPAQR3ENSG00000163291.10chr4-7985627479856460798562747985643779860193798603790.146000.012010.06179longerK562AQR
A3SSPAQR3ENSG00000163291.10chr4-7985132379851520798513237985147979856274798564600.087000.006010.03397longerK562AQR
MXEPAQR3ENSG00000163291.10chr4-7984329479843575798450107984510179841687798418357984767479847872-0.079000.000030.002432includedK562RBM15
MXEPAQR3ENSG00000163291.10chr4-7984329479843575798450107984510179841687798418357984767479847872-0.121000.000000.000012includedK562U2AF1
MXEPAQR3ENSG00000163291.10chr4-7984329479843575798450107984510179841687798418357984767479847872-0.054000.001610.029192includedK562PUS1
MXEPAQR3ENSG00000163291.10chr4-7984168779841835798450107984510179838914798390347984767479847872-0.221000.000000.000002includedK562AQR
MXEPAQR3ENSG00000163291.10chr4-7984329479843575798439827984413779841687798418357984501079845101-0.233000.005440.058562includedK562U2AF2
MXEPAQR3ENSG00000163291.10chr4-7984329479843575798450107984510179841687798418357984767479847872-0.052000.000020.066332includedK562WRN

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for PAQR3 is not avaliable on ENCORE database.