NDUFB10

General Information

Gene Name : NDUFB10
Gene ID : ENSG00000140990.14
Essential Gene : Yes

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: NDUFB10)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	NDUFB10	ENSG00000140990.14	38.49	59.32	48.91	ENCSR000AEF
HepG2	NDUFB10	ENSG00000140990.14	237.52	104.77	171.15	ENCSR985KAT
K562	NDUFB10	ENSG00000140990.14	156.61	108.31	132.46	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for NDUFB10 is not avaliable on ENCORE database.

Proteins bound to RNA

NDUFB10 RNA is bound by 11 proteins.

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eCLIP assay for NDUFB10 is not avaliable on ENCORE database.

11 proteins are bound to NDUFB10 RNA:

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Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr16	2011520	2011586	+	CDS	5.18068	60.85518	K562	PABPC4
chr16	2009628	2009700	+	CDS	5.44502	51.41251	K562	DDX3X
chr16	2011172	2011238	+	CDS	4.08091	37.47325	K562	YBX3
chr16	2009569	2009639	+	5'-UTR,CDS	4.56649	33.14191	HepG2	DDX3X
chr16	2009575	2009628	+	5'-UTR,CDS	6.08231	27.99119	K562	DDX3X
chr16	2011852	2011948	+	3'-UTR,CDS	5.27810	27.01577	HepG2	LARP4
chr16	2011782	2011852	+	3'-UTR,CDS,intron-Proximal	6.65309	26.72520	HepG2	LARP4
chr16	2009639	2009690	+	CDS	3.80523	19.58341	HepG2	DDX3X
chr16	2011518	2011562	+	CDS	3.50621	16.27835	K562	YBX3
chr16	2011526	2011577	+	CDS	6.13067	16.26737	HepG2	LARP4
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 27 entries

eCLIP assay for NDUFB10 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for NDUFB10 is not available on ENCORE database.
87 RBPs can affect the levels of NDUFB10.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for NDUFB10 is not available on ENCORE database.

87 RBPs can affect the gene expression of NDUFB10 :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
NDUFB10	ENSG00000140990.10	187.65410	1192.60950	-2.66800	119.75210	117.70340	HepG2	SRFBP1
NDUFB10	ENSG00000140990.10	2460.59920	1619.68610	0.60320	15.67320	14.43610	K562	AGGF1
NDUFB10	ENSG00000140990.10	2991.76400	1671.25910	0.84000	15.26050	14.02680	K562	PUS1
NDUFB10	ENSG00000140990.10	1523.33550	2222.26020	-0.54480	14.37740	12.46440	K562	SRPK2
NDUFB10	ENSG00000140990.10	625.48190	1055.91130	-0.75540	12.21140	11.28180	HepG2	RBM22
NDUFB10	ENSG00000140990.10	444.39010	748.68580	-0.75250	11.89230	10.88960	HepG2	SRSF9
NDUFB10	ENSG00000140990.10	409.49860	841.22930	-1.03860	12.36210	10.86800	HepG2	PABPC4
NDUFB10	ENSG00000140990.10	745.04030	1100.32860	-0.56250	8.48140	7.38910	HepG2	AUH
NDUFB10	ENSG00000140990.10	499.74020	837.39670	-0.74470	8.53310	7.19290	HepG2	FUBP3
NDUFB10	ENSG00000140990.10	395.59790	734.43800	-0.89260	7.60180	6.30840	K562	G3BP2
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 93 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for NDUFB10 is not available on ENCORE database.

18 RBPs can affect the splicing of NDUFB10 :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
A3SS	NDUFB10	ENSG00000140990.10	chr16	+	2011471	2011612	2011497	2011612	2011123	2011292	0.05100	0.00000	0.00000	longer	K562	AQR
RI	NDUFB10	ENSG00000140990.10	chr16	+	2011497	2011976	2011497	2011637	2011797	2011976	0.18200	0.00000	0.00000	included	K562	HNRNPC
RI	NDUFB10	ENSG00000140990.10	chr16	+	2011497	2011976	2011497	2011637	2011797	2011976	0.27900	0.00000	0.00000	included	HepG2	U2AF1
RI	NDUFB10	ENSG00000140990.10	chr16	+	2011497	2011976	2011497	2011637	2011797	2011976	0.19000	0.00000	0.00000	included	HepG2	RBM22
RI	NDUFB10	ENSG00000140990.10	chr16	+	2011497	2011976	2011497	2011637	2011797	2011976	0.12400	0.00000	0.00002	included	HepG2	SRSF9
RI	NDUFB10	ENSG00000140990.10	chr16	+	2011497	2011976	2011497	2011637	2011797	2011976	0.22200	0.00000	0.00000	included	K562	AQR
RI	NDUFB10	ENSG00000140990.10	chr16	+	2011497	2011976	2011497	2011637	2011756	2011976	-0.09200	0.00001	0.00009	excluded	K562	AQR
RI	NDUFB10	ENSG00000140990.10	chr16	+	2011497	2011976	2011497	2011637	2011797	2011976	0.45700	0.00002	0.00026	included	HepG2	U2AF2
RI	NDUFB10	ENSG00000140990.10	chr16	+	2011497	2011976	2011497	2011637	2011797	2011976	-0.16700	0.00002	0.00813	excluded	K562	UTP3
RI	NDUFB10	ENSG00000140990.10	chr16	+	2011497	2011976	2011497	2011637	2011797	2011976	0.10300	0.00004	0.00183	included	K562	SRSF1

Showing 1 to 10 of 21 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

NDUFB10

General Information

Functions

Localization

Domains (AlphaFold: NDUFB10)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for NDUFB10 is not avaliable on ENCORE database.

11 proteins are bound to NDUFB10 RNA:

eCLIP assay for NDUFB10 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for NDUFB10 is not available on ENCORE database.

87 RBPs can affect the gene expression of NDUFB10 :

The Knockdown/knockout RNA-Seq assay for NDUFB10 is not available on ENCORE database.

18 RBPs can affect the splicing of NDUFB10 :

The Knockdown/knockout RNA-Seq assay for NDUFB10 is not avaliable on ENCORE database.