MRTO4

General Information

Gene Name : MRTO4
Gene ID : ENSG00000053372.4
Essential Gene : Yes

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: MRTO4)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	MRTO4	ENSG00000053372.4	46.26	56.21	51.23	ENCSR000AEF
HepG2	MRTO4	ENSG00000053372.4	45.70	46.79	46.25	ENCSR985KAT
K562	MRTO4	ENSG00000053372.4	118.08	116.63	117.35	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for MRTO4 is not avaliable on ENCORE database.

Proteins bound to RNA

MRTO4 RNA is bound by 17 proteins.

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eCLIP assay for MRTO4 is not avaliable on ENCORE database.

17 proteins are bound to MRTO4 RNA:

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Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr1	19585430	19585482	+	3'-UTR	5.92747	49.93750	HepG2	UPF1
chr1	19585482	19585531	+	3'-UTR	5.41369	44.21520	HepG2	UPF1
chr1	19586469	19586579	+	3'-UTR	5.22715	39.94180	K562	AKAP1
chr1	19585827	19585908	+	3'-UTR	6.84166	27.90604	K562	UPF1
chr1	19585919	19585980	+	3'-UTR	4.85132	23.54497	K562	UPF1
chr1	19586523	19586584	+	3'-UTR	4.67918	20.29077	K562	UPF1
chr1	19578289	19578358	+	5'-UTR,CDS,intron-Proximal	3.75019	19.03300	K562	DDX3X
chr1	19585923	19585950	+	3'-UTR	5.13182	18.95754	K562	PABPC4
chr1	19586479	19586523	+	3'-UTR	5.23072	18.64938	HepG2	UPF1
chr1	19585980	19586051	+	3'-UTR	4.72331	17.32502	K562	UPF1
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 64 entries

eCLIP assay for MRTO4 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for MRTO4 is not available on ENCORE database.
115 RBPs can affect the levels of MRTO4.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for MRTO4 is not available on ENCORE database.

115 RBPs can affect the gene expression of MRTO4 :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
MRTO4	ENSG00000053372.4	3625.88730	1184.85510	1.61350	82.65090	79.77160	K562	FXR1
MRTO4	ENSG00000053372.4	3236.96570	1571.39310	1.04250	35.56320	32.74480	K562	EIF3G
MRTO4	ENSG00000053372.4	3339.12150	1584.17690	1.07560	30.83420	28.70310	K562	PTBP1
MRTO4	ENSG00000053372.4	1171.38460	581.97300	1.00910	25.64460	24.10310	HepG2	UTP3
MRTO4	ENSG00000053372.4	1124.35170	1994.43660	-0.82690	16.52820	14.58500	K562	CPSF6
MRTO4	ENSG00000053372.4	664.54910	1138.41560	-0.77660	15.38020	13.86750	HepG2	HNRNPF
MRTO4	ENSG00000053372.4	2911.89700	4357.66090	-0.58160	14.77480	13.31030	K562	EIF2S2
MRTO4	ENSG00000053372.4	4641.18550	2969.10900	0.64440	14.01790	12.66170	K562	DDX47
MRTO4	ENSG00000053372.4	673.23600	1238.04960	-0.87890	13.35080	12.39290	HepG2	SSB
MRTO4	ENSG00000053372.4	2734.24650	1627.14170	0.74870	14.53810	12.32410	K562	MATR3
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 142 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for MRTO4 is not available on ENCORE database.

6 RBPs can affect the splicing of MRTO4 :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	2ndExonStart	2ndExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
SE	MRTO4	ENSG00000053372.4	chr1	+	19582419	19582545			19581168	19581334	19583557	19583639	-0.05100	0.00000	0.00005	excluded	K562	AQR
SE	MRTO4	ENSG00000053372.4	chr1	+	19581275	19581334			19578032	19578357	19582441	19582546	-0.06200	0.00003	0.00157	excluded	K562	AGGF1
MXE	MRTO4	ENSG00000053372.4	chr1	+	19581275	19581334	19582441	19582545	19578032	19578357	19583557	19583639	0.09900	0.00046	0.01878	1included	K562	XRN2
MXE	MRTO4	ENSG00000053372.4	chr1	+	19581275	19581334	19582441	19582545	19578032	19578357	19583557	19583639	0.10200	0.00049	0.01869	1included	K562	UCHL5
MXE	MRTO4	ENSG00000053372.4	chr1	+	19581275	19581334	19582441	19582545	19578032	19578357	19583557	19583639	0.12100	0.00055	0.03416	1included	K562	PHF6
MXE	MRTO4	ENSG00000053372.4	chr1	+	19581275	19581334	19582441	19582545	19578032	19578357	19583557	19583639	-0.12900	0.00359	0.06939	2included	HepG2	HNRNPK

Showing 1 to 6 of 6 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

MRTO4

General Information

Functions

Localization

Domains (AlphaFold: MRTO4)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for MRTO4 is not avaliable on ENCORE database.

17 proteins are bound to MRTO4 RNA:

eCLIP assay for MRTO4 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for MRTO4 is not available on ENCORE database.

115 RBPs can affect the gene expression of MRTO4 :

The Knockdown/knockout RNA-Seq assay for MRTO4 is not available on ENCORE database.

6 RBPs can affect the splicing of MRTO4 :

The Knockdown/knockout RNA-Seq assay for MRTO4 is not avaliable on ENCORE database.