INTS6

General Information

Gene Name       : INTS6
Gene ID             : ENSG00000102786.14
Essential Gene : No

Functions

Localization

Domains (AlphaFold: INTS6)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878INTS6ENSG00000102786.1430.4526.2928.37ENCSR000AEF
HepG2INTS6ENSG00000102786.1412.0119.2115.61ENCSR985KAT
K562INTS6ENSG00000102786.1411.6610.8611.26ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for INTS6 is not avaliable on ENCORE database.



Proteins bound to RNA
  • INTS6 RNA is bound by 28 proteins.  







eCLIP assay for INTS6 is not avaliable on ENCORE database.





28 proteins are bound to INTS6 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr135194193751941989-3'-UTR,CDS,intron-Distal,intron-Proximal3.698863.68471HepG2BCLAF1
chr135195773651957802-3'-UTR,CDS,intron-Distal,intron-Proximal3.103125.13250K562YBX3
chr135196161351961723-3'-UTR,CDS,intron-Distal,intron-Proximal4.4016119.62278HepG2U2AF2
chr135194846451948508-3'-UTR,CDS,intron-Distal,intron-Proximal3.339634.26492HepG2BCLAF1
chr135194853551948574-3'-UTR,CDS,intron-Distal4.593114.78529HepG2BCLAF1
chr135194309451943155-3'-UTR,CDS,intron-Distal3.653765.97823HepG2BCLAF1
chr135195023851950272-3'-UTR,CDS,intron-Distal3.359823.57857HepG2BCLAF1
chr135196950651969572-3'-UTR,5'-UTR,CDS,intron-Distal4.234814.45558HepG2GRWD1
chr135196352851963596-3'-UTR,CDS,intron-Distal,intron-Proximal4.154787.96049HepG2U2AF2
chr135195746351957490-3'-UTR,CDS,intron-Distal,intron-Proximal3.051133.17233HepG2BCLAF1
chr135195776351957812-3'-UTR,CDS,intron-Distal,intron-Proximal3.512875.56491HepG2BCLAF1
chr135195757351957599-3'-UTR,CDS,intron-Distal,intron-Proximal3.287863.55800HepG2BCLAF1
chr135196950151969582-3'-UTR,5'-UTR,CDS,intron-Distal3.650116.60490HepG2BCLAF1
chr135195365751953718-3'-UTR,CDS,intron-Distal,intron-Proximal3.084104.81700HepG2U2AF2
chr135195772251957763-3'-UTR,CDS,intron-Distal,intron-Proximal3.894446.39464HepG2BCLAF1
chr135195623251956259-3'-UTR,CDS,intron-Distal3.257164.34695HepG2BCLAF1
chr135195748051957567-3'-UTR,CDS,intron-Distal3.657383.02850K562YBX3
chr135202617652026245-5'-UTR,CDS,intron-Distal,intron-Proximal4.4350919.75513K562AQR
chr135202698552027143-5'-UTR,intron-Distal,intron-Proximal3.168257.06471HepG2HNRNPK
chr135202653852026552-5'-UTR,CDS,intron-Distal,intron-Proximal3.5959810.04871HepG2AQR
chr135202683452026868-5'-UTR,intron-Distal,intron-Proximal4.173474.79286HepG2PRPF4
chr135202707552027170-5'-UTR,intron-Distal,intron-Proximal3.8686416.48312HepG2NCBP2
chr135200441752004471-5'-UTR,CDS,intron-Distal,intron-Proximal3.437703.59112HepG2PPIG
chr135202611352026151-5'-UTR,CDS,intron-Distal,intron-Proximal3.222118.77723HepG2PPIG
chr135202650352026557-5'-UTR,CDS,intron-Distal,intron-Proximal3.703628.23064HepG2PRPF8
chr135202691552026986-5'-UTR,intron-Distal,intron-Proximal3.082076.61245HepG2RBFOX2
chr135202682752026888-5'-UTR,intron-Distal,intron-Proximal3.908865.09028HepG2U2AF2
chr135202523652025317-5'-UTR,CDS,intron-Distal,intron-Proximal3.918753.44423K562BUD13
chr135202616952026226-5'-UTR,CDS,intron-Distal,intron-Proximal3.823894.65237HepG2U2AF2
chr135202614252026241-5'-UTR,CDS,intron-Distal,intron-Proximal3.2178015.97617HepG2PRPF8
chr135202616952026248-5'-UTR,CDS,intron-Distal,intron-Proximal3.3906413.36659K562PRPF8
chr135200441252004459-5'-UTR,CDS,intron-Distal,intron-Proximal3.171633.94979HepG2BCLAF1
chr135202683852026891-5'-UTR,intron-Distal,intron-Proximal3.705613.23561HepG2U2AF1
chr135202607052026123-5'-UTR,CDS,intron-Distal,intron-Proximal3.0946110.72310HepG2PRPF8
chr135202634952026481-intron-Distal,intron-Proximal5.0101420.03760HepG2PRPF4
chr135202640352026485-intron-Distal,intron-Proximal3.7342916.98468HepG2EFTUD2
chr135194003751940086-intron-Distal,intron-Proximal4.151573.35169HepG2U2AF2
chr135198253551982593-intron-Distal3.649113.18711HepG2ILF3
chr135202597752026029-intron-Distal,intron-Proximal3.368236.57140HepG2PCBP2
chr135196476951964832-intron-Distal3.564554.76825K562KHSRP
chr135202624652026348-intron-Distal,intron-Proximal4.5226411.01307HepG2RBFOX2
chr135199836751998433-intron-Distal4.369004.30850HepG2QKI
chr135202292352022985-intron-Distal3.473573.10946HepG2SFPQ
chr135199031751990368-intron-Distal4.040863.41738HepG2PTBP1
chr135200384152003902-intron-Distal4.423814.84804HepG2HNRNPC
chr135196389851964011-intron-Distal3.582314.56724K562KHSRP
chr135201986952019940-intron-Distal3.249808.83187HepG2HNRNPC
chr135202651152026537-intron-Distal,intron-Proximal5.9932415.33739HepG2AQR
chr135201714552017228-intron-Distal3.855033.42844K562KHSRP
chr135197364251973694-intron-Distal4.314016.88352HepG2HNRNPL
chr135195298951953098-intron-Distal3.436383.55754HepG2U2AF2
chr135202640652026484-intron-Distal,intron-Proximal3.345846.12965HepG2AQR
chr135194046551940589-intron-Distal4.104073.49011K562KHSRP
chr135200456552004654-intron-Distal,intron-Proximal3.830573.42844K562KHSRP
chr135195795251958038-intron-Distal,intron-Proximal3.716036.58004HepG2U2AF2
chr135202593352025976-intron-Distal4.094053.82414HepG2HNRNPK
chr135196471351964769-intron-Distal4.329654.79379K562KHSRP
chr135199022451990317-intron-Distal4.603624.74221HepG2PTBP1
chr135202307652023102-intron-Distal4.204453.20552HepG2KHSRP
chr135196922951969340-intron-Distal,intron-Proximal4.313804.79379K562KHSRP
chr135202302552023076-intron-Distal3.127463.42827HepG2KHSRP
chr135202636252026477-intron-Distal,intron-Proximal3.6458214.19895K562AQR
chr135202634852026492-intron-Distal,intron-Proximal3.9226917.10527HepG2RBFOX2
chr135194030351940433-intron-Distal4.151574.77518HepG2U2AF2
chr135202597652026023-intron-Distal,intron-Proximal3.656943.59783HepG2HNRNPK
chr135202619452026248-intron-Distal,intron-Proximal4.2205210.54451HepG2AQR
chr135197355351973623-intron-Distal5.314017.76609HepG2HNRNPL
chr135200220052002264-intron-Distal3.280805.13070HepG2HNRNPM
chr135202602352026105-intron-Distal,intron-Proximal3.541058.82289HepG2HNRNPK
chr135200221252002323-intron-Distal3.556515.40624K562KHSRP
chr135202595152026023-intron-Distal,intron-Proximal4.020415.65933HepG2DDX59
chr135202632152026460-intron-Distal,intron-Proximal3.879847.49400HepG2GTF2F1
chr135202295252023025-intron-Distal3.023174.79429HepG2KHSRP
chr135196135851961457-intron-Distal,intron-Proximal3.437066.41380HepG2KHSRP
chr135202634952026487-intron-Distal,intron-Proximal3.094777.24044HepG2FAM120A
chr135196013351960223-intron-Distal4.656043.55640HepG2QKI
chr135199398551994063-intron-Distal3.719383.42785HepG2HNRNPM
chr135200220852002310-intron-Distal4.362204.83283HepG2KHSRP
chr135196135351961515-intron-Distal,intron-Proximal3.692587.50310K562KHSRP
chr135202620352026253-intron-Distal,intron-Proximal5.2644610.93557HepG2EFTUD2
chr135196221651962263-intron-Distal3.785923.06150K562KHSRP
chr135196472751964878-intron-Distal3.377087.77911HepG2KHSRP
chr135196201351962067-intron-Distal4.193684.29306HepG2KHSRP
chr135202633852026403-intron-Distal,intron-Proximal4.1001317.79918HepG2EFTUD2
chr135200047152000513-intron-Distal3.265933.42785HepG2HNRNPM
chr135202225152022310-intron-Distal3.609103.02234K562KHSRP
chr135202638152026481-intron-Distal,intron-Proximal3.9603410.06144HepG2CSTF2T
chr135202634252026402-intron-Distal,intron-Proximal3.4632517.46308HepG2PRPF8
chr135200003852000092-intron-Distal3.344863.66782HepG2HNRNPM
chr135202603752026093-intron-Distal,intron-Proximal5.3184514.89505HepG2PCBP2
chr135193748651937557-intron-Distal4.045983.39864HepG2SUGP2
chr135202640252026481-intron-Distal,intron-Proximal3.5164125.62895HepG2PRPF8
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for INTS6 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for INTS6 is not available on ENCORE database.

  • 83 RBPs can affect the levels of INTS6.  








The Knockdown/knockout RNA-Seq assay for INTS6 is not available on ENCORE database.





83 RBPs can affect the gene expression of INTS6 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
INTS6ENSG00000102786.10869.23470669.357600.376902.630401.58250HepG2AATF
INTS6ENSG00000102786.101259.59330958.104700.394605.657904.85040HepG2ACO1
INTS6ENSG00000102786.101104.54560850.781300.376502.493901.74530HepG2ASCC1
INTS6ENSG00000102786.101146.899101470.48980-0.358604.616003.76890HepG2AUH
INTS6ENSG00000102786.10683.474801053.25580-0.623903.633902.75170HepG2CNOT7
INTS6ENSG00000102786.101423.051101150.107700.307102.680401.59300HepG2CPSF7
INTS6ENSG00000102786.10870.485501037.83190-0.253702.729301.99190HepG2DAZAP1
INTS6ENSG00000102786.10516.71730738.77360-0.515804.309303.48230HepG2DDX21
INTS6ENSG00000102786.102139.15280846.048601.3381023.1833021.63470HepG2DDX6
INTS6ENSG00000102786.10633.06780807.13220-0.350402.382401.47220HepG2DHX30
INTS6ENSG00000102786.10736.36010916.63700-0.315902.877902.18800HepG2DKC1
INTS6ENSG00000102786.10622.64600836.81990-0.426504.251403.39580HepG2DNAJC21
INTS6ENSG00000102786.10620.19010829.51590-0.419605.194804.34630HepG2DNAJC2
INTS6ENSG00000102786.10590.16710898.94590-0.607104.572303.75370HepG2EIF4A3
INTS6ENSG00000102786.101252.09000875.178000.516603.167102.43390HepG2EIF4B
INTS6ENSG00000102786.102076.641801688.289300.298604.266903.54790HepG2ETF1
INTS6ENSG00000102786.10708.75420974.98210-0.460102.414701.37330HepG2GRSF1
INTS6ENSG00000102786.101111.87480914.693300.281502.914201.91610HepG2HDGF
INTS6ENSG00000102786.10556.18160844.83780-0.603105.889904.99570HepG2HNRNPA1
INTS6ENSG00000102786.10791.60210945.41010-0.256202.598301.94450HepG2HNRNPL
INTS6ENSG00000102786.10737.25830933.53910-0.340503.603502.92020HepG2HNRNPU
INTS6ENSG00000102786.10702.35780953.57440-0.441106.375005.30700HepG2ILF2
INTS6ENSG00000102786.101028.82360875.804800.232202.241001.32120HepG2KIF1C
INTS6ENSG00000102786.10556.86570763.24040-0.454803.252201.93690HepG2LIN28B
INTS6ENSG00000102786.101086.16860831.680500.385002.547301.85200HepG2PABPC4
INTS6ENSG00000102786.101069.36870819.342700.384104.485003.74400HepG2PCBP1
INTS6ENSG00000102786.10610.67710982.35070-0.685805.942205.11290HepG2PUF60
INTS6ENSG00000102786.101159.59440902.930500.360803.396502.71370HepG2QKI
INTS6ENSG00000102786.101460.05750859.904100.763704.837703.92010HepG2RAVER1
INTS6ENSG00000102786.101269.44870819.467500.631308.191407.08120HepG2RBM25
INTS6ENSG00000102786.10653.39260831.34110-0.347503.522802.81190HepG2SAFB2
INTS6ENSG00000102786.101110.47110868.001600.355303.767303.09370HepG2SF3B4
INTS6ENSG00000102786.102423.133901593.800600.6043016.2631015.31350HepG2SRFBP1
INTS6ENSG00000102786.10989.541801486.40260-0.587004.734903.39240HepG2SRSF3
INTS6ENSG00000102786.101139.92900969.896500.232901.896101.36460HepG2SRSF5
INTS6ENSG00000102786.101345.19430737.084000.8678022.8040021.50210HepG2SRSF9
INTS6ENSG00000102786.101087.191101383.81550-0.348004.501903.87960HepG2SSB
INTS6ENSG00000102786.101327.55480803.568200.724205.289903.62950HepG2SUB1
INTS6ENSG00000102786.101362.422301103.066700.304603.638402.94370HepG2SUCLG1
INTS6ENSG00000102786.101260.04390952.261900.403904.091902.95980HepG2SUPT6H
INTS6ENSG00000102786.10933.03440748.279800.318302.435501.64890HepG2TIA1
INTS6ENSG00000102786.10612.51170907.00120-0.566406.566005.85610HepG2TIAL1
INTS6ENSG00000102786.10748.69520915.22340-0.289702.736302.17390HepG2TRIM56
INTS6ENSG00000102786.101858.256401206.226100.623307.697506.65340HepG2U2AF1
INTS6ENSG00000102786.10316.41550435.19570-0.459802.177801.50390HepG2UCHL5
INTS6ENSG00000102786.101227.02470845.379000.537403.113301.76960HepG2XRCC5
INTS6ENSG00000102786.10516.72650725.12410-0.488802.574701.87430HepG2XRN2
INTS6ENSG00000102786.101556.990401316.720900.241703.100102.53120HepG2ZNF622
INTS6ENSG00000102786.101327.99350858.903300.628604.719602.98590HepG2ZRANB2
INTS6ENSG00000102786.10607.64020843.93470-0.473905.325304.57950K562AGGF1
INTS6ENSG00000102786.10715.14540878.14310-0.296201.878501.33600K562AKAP8L
INTS6ENSG00000102786.101941.34750813.263401.2552026.5768024.95560K562AQR
INTS6ENSG00000102786.101034.87080693.658800.577105.275204.05920K562BOP1
INTS6ENSG00000102786.10716.07340532.153500.428203.059901.70650K562CIRBP
INTS6ENSG00000102786.10957.18080737.557600.375903.020502.20170K562CPSF6
INTS6ENSG00000102786.101604.422001262.613100.345503.795002.64500K562CELF1
INTS6ENSG00000102786.101906.95260927.112601.0404034.2759032.25530K562DDX47
INTS6ENSG00000102786.10773.82860945.00230-0.288302.475301.65310K562DKC1
INTS6ENSG00000102786.10760.90990443.932400.777306.245904.60140K562EIF3D
INTS6ENSG00000102786.10581.46040448.995700.372902.514301.75610K562EIF3G
INTS6ENSG00000102786.10612.92170419.700600.546204.354203.32580K562EIF4A3
INTS6ENSG00000102786.10598.63330779.56490-0.381002.618601.79410K562FIP1L1
INTS6ENSG00000102786.101010.48880750.448800.429103.264402.33030K562FMR1
INTS6ENSG00000102786.10973.92150636.073600.614505.464804.13120K562FTO
INTS6ENSG00000102786.10590.20520436.469700.435203.522302.85190K562FXR1
INTS6ENSG00000102786.10682.55120464.809000.554203.309202.52280K562G3BP2
INTS6ENSG00000102786.10790.27150631.329400.323902.528201.44060K562GLRX3
INTS6ENSG00000102786.10916.50700704.185500.380102.799102.00000K562GPKOW
INTS6ENSG00000102786.10785.57570971.65050-0.306701.994201.34670K562GRSF1
INTS6ENSG00000102786.10792.23830427.297900.8906011.5745010.42670K562HNRNPC
INTS6ENSG00000102786.10727.16910931.96140-0.358002.760101.93580K562KIF1C
INTS6ENSG00000102786.10832.56000601.288000.469402.541701.64980K562KRR1
INTS6ENSG00000102786.101073.34080756.055900.505402.649701.44610K562PABPC1
INTS6ENSG00000102786.101182.54830758.934000.639805.944604.71940K562PCBP3
INTS6ENSG00000102786.10854.89520582.117400.554305.947804.77730K562POLR2G
INTS6ENSG00000102786.10627.50430403.368300.637405.123604.10380K562PRPF8
INTS6ENSG00000102786.10703.47440870.94260-0.308102.086101.60210K562PUS1
INTS6ENSG00000102786.10706.94250848.54800-0.263401.860201.35640K562RBM15
INTS6ENSG00000102786.10660.28940410.957300.684005.421804.27470K562RPS19
INTS6ENSG00000102786.101155.83520702.176700.718904.642002.54950K562RPS3A
INTS6ENSG00000102786.10902.67010669.707400.430602.664201.70890K562SF3B1
INTS6ENSG00000102786.10562.13160412.293100.447103.010901.35200K562SND1
INTS6ENSG00000102786.10912.32330745.537400.291202.755601.82150K562SRPK2
INTS6ENSG00000102786.10642.75550497.026100.370802.557101.87360K562SRSF1
INTS6ENSG00000102786.10628.04680390.693000.684705.467804.00160K562SUPV3L1
INTS6ENSG00000102786.101086.77320810.770500.422602.794701.58670K562UTP3
INTS6ENSG00000102786.101066.83530695.804100.6165011.090409.53050K562WDR43
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for INTS6 is not available on ENCORE database.





10 RBPs can affect the splicing of INTS6 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEINTS6ENSG00000102786.10chr13-519561645195625951953597519537085195746451957597-0.164000.004300.04109excludedK562AQR
SEINTS6ENSG00000102786.10chr13-519561645195625951953597519537085195746451957597-0.183000.001050.01773excludedK562PUS1
A3SSINTS6ENSG00000102786.10chr13-5195746451957630519574645195759751957724519578770.080000.000570.00418longerK562AQR
A3SSINTS6ENSG00000102786.10chr13-5193987151940112519398715193998151941940519420840.065000.002530.01587longerK562AQR
A3SSINTS6ENSG00000102786.10chr13-5200442952004616520044295200451952025160520253770.141000.000630.00457longerK562AQR
A3SSINTS6ENSG00000102786.10chr13-5195018351950420519501835195031051952374519525900.055000.002750.01709longerK562AQR
A3SSINTS6ENSG00000102786.10chr13-5195616451956344519561645195625951957464519576300.131000.000010.00010longerK562AQR
A3SSINTS6ENSG00000102786.10chr13-5195778951957996519577895195787751961521519616760.221000.000000.00000longerK562AQR
A3SSINTS6ENSG00000102786.10chr13-5194194051942128519419405194203451943074519434460.057000.002130.01363longerK562AQR
MXEINTS6ENSG00000102786.10chr13-51969435519696195200442952004519519634545196358052025160520253100.199000.002490.043981includedHepG2FTO
MXEINTS6ENSG00000102786.10chr13-5196345451963580519694355196961951961521519616765200442952004519-0.237000.000630.027212includedHepG2PTBP1
MXEINTS6ENSG00000102786.10chr13-51963454519635805196943551969619519615215196167652004429520045190.141000.006410.064991includedK562DROSHA
MXEINTS6ENSG00000102786.10chr13-5196345451963580519694355196961951961521519616765200442952004519-0.221000.003210.075272includedK562XRN2
MXEINTS6ENSG00000102786.10chr13-51953597519537085195616451956259519523745195259051957464519575970.183000.000880.007331includedHepG2U2AF2
MXEINTS6ENSG00000102786.10chr13-5196345451963580519694355196961951961521519616765200442952004519-0.220000.000340.014912includedHepG2PCBP1
MXEINTS6ENSG00000102786.10chr13-51963454519635805196943551969619519615215196167652004429520045190.270000.000300.058731includedHepG2DKC1
MXEINTS6ENSG00000102786.10chr13-51963454519635805196943551969619519615215196167652004429520045190.172000.001190.026341includedK562HNRNPUL1

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for INTS6 is not avaliable on ENCORE database.