GOLGA2B

General Information

Gene Name       : GOLGA2B
Gene ID             :
Essential Gene : No

Functions

Localization

Domains (AlphaFold: GOLGA2B)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for GOLGA2B is not avaliable on ENCORE database.



Proteins bound to RNA
  • GOLGA2B RNA is bound by 10 proteins.  







eCLIP assay for GOLGA2B is not avaliable on ENCORE database.





10 proteins are bound to GOLGA2B RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr12100560688100560797-intron-Distal,intron-Proximal4.454433.90256HepG2PRPF4
chr12100560224100560284-intron-Distal4.728304.34038HepG2BCLAF1
chr12100560211100560316-intron-Distal3.918193.80990HepG2SRSF1
chr12100559665100559751-intron-Distal,intron-Proximal3.357195.30777HepG2PPIG
chr12100561329100561419-intron-Distal,intron-Proximal3.632457.10944HepG2PPIG
chr12100561108100561197-intron-Distal,intron-Proximal3.761624.46864HepG2BCLAF1
chr12100564669100564751-intron-Distal,intron-Proximal4.4920412.81328HepG2PRPF8
chr12100560226100560337-intron-Distal4.4654413.35495HepG2PPIG
chr12100562574100562697-intron-Distal,intron-Proximal4.735596.11596HepG2PRPF4
chr12100550753100550827-intron-Distal,intron-Proximal4.229344.52184HepG2PABPN1
chr12100560355100560422-intron-Distal,intron-Proximal3.982175.94293HepG2BCLAF1
chr12100560385100560433-intron-Distal,intron-Proximal4.213195.47493HepG2BUD13
chr12100551776100551855-intron-Distal,intron-Proximal4.043457.55042HepG2PPIG
chr12100560645100560764-intron-Distal,intron-Proximal4.576384.65580K562GTF2F1
chr12100552908100553033-intron-Distal,intron-Proximal3.130623.20279HepG2LSM11
chr12100560391100560418-intron-Distal,intron-Proximal3.437704.13746HepG2PPIG
chr12100559851100559916-intron-Distal,intron-Proximal3.110913.99124HepG2PPIG
chr12100564342100564433-intron-Distal,intron-Proximal3.073096.09950HepG2BCLAF1
chr12100553540100553585-intron-Distal4.111843.45943HepG2BCLAF1
chr12100562570100562698-intron-Distal,intron-Proximal3.833936.35159HepG2RBFOX2
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for GOLGA2B is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for GOLGA2B is not available on ENCORE database.

  • 92 RBPs can affect the levels of GOLGA2B.  








The Knockdown/knockout RNA-Seq assay for GOLGA2B is not available on ENCORE database.





92 RBPs can affect the gene expression of GOLGA2B :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
GOLGA2BENSG00000238105.3386.15370612.88530-0.666408.608507.65790HepG2ACO1
GOLGA2BENSG00000238105.3814.71890442.395900.8809010.313308.55700HepG2ADAR
GOLGA2BENSG00000238105.3221.90130453.35010-1.030707.704906.86440HepG2AKAP1
GOLGA2BENSG00000238105.3291.85060447.05860-0.615204.247403.52360HepG2BOP1
GOLGA2BENSG00000238105.3473.71450356.377500.410502.044601.37310HepG2CIRBP
GOLGA2BENSG00000238105.3457.27450612.82280-0.422404.138203.35620HepG2CKAP4
GOLGA2BENSG00000238105.3639.46800830.16450-0.376503.551402.84160HepG2CELF1
GOLGA2BENSG00000238105.3594.57660454.297700.388102.966201.77120HepG2DDX1
GOLGA2BENSG00000238105.3343.06360488.48940-0.509902.254601.54950HepG2DDX55
GOLGA2BENSG00000238105.3682.96440429.651300.668504.721403.45390HepG2DHX30
GOLGA2BENSG00000238105.3927.18080586.383400.6609010.021908.89490HepG2DKC1
GOLGA2BENSG00000238105.3391.22920568.43210-0.539003.674202.38540HepG2EFTUD2
GOLGA2BENSG00000238105.3546.56000358.616900.607804.103103.39000HepG2EIF2S1
GOLGA2BENSG00000238105.3400.83440553.51580-0.465602.731401.83430HepG2EIF3D
GOLGA2BENSG00000238105.3923.98520396.305801.2212015.6820014.17680HepG2EIF4A3
GOLGA2BENSG00000238105.3888.03640602.759500.558904.841203.43790HepG2ESF1
GOLGA2BENSG00000238105.31200.82060963.947800.316903.336402.68540HepG2ETF1
GOLGA2BENSG00000238105.3708.36550310.429501.1901017.1109015.24040HepG2FUBP3
GOLGA2BENSG00000238105.3606.87790399.880200.601704.303203.45420HepG2FXR1
GOLGA2BENSG00000238105.3689.46250370.934800.894208.557407.42190HepG2G3BP1
GOLGA2BENSG00000238105.31015.43490393.811501.3664022.2164019.81410HepG2G3BP2
GOLGA2BENSG00000238105.3792.96660465.200700.769306.710405.74090HepG2GPKOW
GOLGA2BENSG00000238105.3879.90700500.247300.814609.485708.26490HepG2HNRNPC
GOLGA2BENSG00000238105.3684.42950507.642500.431003.904503.06670HepG2HNRNPF
GOLGA2BENSG00000238105.3664.09270375.634900.822007.927606.79220HepG2HNRNPK
GOLGA2BENSG00000238105.3253.37680496.93930-0.9718013.5992012.33800HepG2HNRNPU
GOLGA2BENSG00000238105.3837.66790379.248901.1431011.729809.58380HepG2KHSRP
GOLGA2BENSG00000238105.3608.09130914.22130-0.588304.003103.00070HepG2LARP4
GOLGA2BENSG00000238105.3395.35250596.74680-0.594004.881803.37570HepG2LARP7
GOLGA2BENSG00000238105.3589.48780400.019900.559303.698702.94050HepG2MAGOH
GOLGA2BENSG00000238105.3435.90150568.64730-0.383502.432801.67230HepG2MSI2
GOLGA2BENSG00000238105.3853.49270452.846800.914306.564705.03540HepG2MTPAP
GOLGA2BENSG00000238105.3545.56780411.727000.406002.065001.51370HepG2NCBP2
GOLGA2BENSG00000238105.3687.92870393.673100.805207.783806.57120HepG2NSUN2
GOLGA2BENSG00000238105.3532.43380366.655000.538103.360402.57000HepG2PABPC4
GOLGA2BENSG00000238105.3552.80450360.816400.615406.507505.63740HepG2PCBP1
GOLGA2BENSG00000238105.3550.77120443.228400.313302.080901.43380HepG2PPIL4
GOLGA2BENSG00000238105.3770.12300541.362100.508404.539403.57330HepG2PRPF4
GOLGA2BENSG00000238105.31362.41030844.943000.689103.232302.59420HepG2PUF60
GOLGA2BENSG00000238105.3589.52430896.93990-0.6055010.004609.02430HepG2PUM1
GOLGA2BENSG00000238105.3669.77060896.28750-0.420303.806603.02450HepG2PUM2
GOLGA2BENSG00000238105.3810.41200397.620601.0272016.5336015.19060HepG2QKI
GOLGA2BENSG00000238105.3348.11170805.67280-1.2106023.6852022.46820HepG2RBM22
GOLGA2BENSG00000238105.3464.21000360.870500.363202.003401.42290HepG2RBM25
GOLGA2BENSG00000238105.3550.34280719.58600-0.386802.433701.51010HepG2RBM27
GOLGA2BENSG00000238105.3606.21970408.597700.569105.381704.66740HepG2NELFE
GOLGA2BENSG00000238105.3806.00430380.561301.0826020.6490019.23180HepG2RECQL
GOLGA2BENSG00000238105.3258.94800538.59360-1.0565012.3457011.15970HepG2RPS19
GOLGA2BENSG00000238105.3440.23720663.63820-0.592104.676603.65110HepG2RPS2
GOLGA2BENSG00000238105.3236.26950372.88500-0.658303.169702.33590HepG2RRP9
GOLGA2BENSG00000238105.3571.62690442.540800.369203.057302.38630HepG2SAFB2
GOLGA2BENSG00000238105.3618.847301103.34960-0.834204.019403.20060HepG2SF3A3
GOLGA2BENSG00000238105.3323.34630439.40620-0.442502.401801.74220HepG2SF3B1
GOLGA2BENSG00000238105.3365.67160516.06780-0.497004.743303.93820HepG2SMN1
GOLGA2BENSG00000238105.3633.62340324.595000.9649016.1717015.03490HepG2SRSF9
GOLGA2BENSG00000238105.31091.76480790.033300.466603.586203.01930HepG2SSB
GOLGA2BENSG00000238105.3746.03540948.77990-0.346803.702303.00100HepG2SUCLG1
GOLGA2BENSG00000238105.3349.26260486.31620-0.477602.021301.43000HepG2SUPV3L1
GOLGA2BENSG00000238105.31380.33440358.629801.9444072.7077070.34420HepG2TAF15
GOLGA2BENSG00000238105.3216.98360325.98050-0.587202.392501.45850HepG2TFIP11
GOLGA2BENSG00000238105.3619.70550329.520400.9111011.605709.92830HepG2TIA1
GOLGA2BENSG00000238105.3772.97350482.833500.678803.907103.33420HepG2TIAL1
GOLGA2BENSG00000238105.3797.68580978.49860-0.294702.907402.19440HepG2UPF1
GOLGA2BENSG00000238105.3457.59360699.17600-0.611603.697202.47100HepG2XRCC6
GOLGA2BENSG00000238105.3745.81570478.724000.639505.406304.40310HepG2XRN2
GOLGA2BENSG00000238105.3588.010401076.16660-0.8720022.1719020.98760HepG2ZNF622
GOLGA2BENSG00000238105.368.19720204.99150-1.5878011.7708010.69440K562AGGF1
GOLGA2BENSG00000238105.3121.12980225.24070-0.894905.379603.90310K562AKAP8
GOLGA2BENSG00000238105.3111.44860213.29950-0.936505.274804.35910K562AKAP8L
GOLGA2BENSG00000238105.3125.99930203.83590-0.694002.871002.27360K562AQR
GOLGA2BENSG00000238105.3151.69160223.79600-0.561002.811601.89070K562ATP5C1
GOLGA2BENSG00000238105.3160.19620240.51090-0.586302.871401.38100K562DDX19B
GOLGA2BENSG00000238105.3136.46100243.17930-0.833505.696804.81190K562DDX47
GOLGA2BENSG00000238105.3102.32520229.54720-1.165609.053307.28310K562DKC1
GOLGA2BENSG00000238105.355.52110108.86670-0.971503.321002.31630K562EFTUD2
GOLGA2BENSG00000238105.3277.73250176.857900.651004.177003.32050K562EIF2S2
GOLGA2BENSG00000238105.385.10460144.58800-0.764602.888002.02110K562FIP1L1
GOLGA2BENSG00000238105.394.96250235.70770-1.311608.899007.52170K562GRSF1
GOLGA2BENSG00000238105.378.90670152.68990-0.952404.641803.26190K562HNRNPA1
GOLGA2BENSG00000238105.385.73920175.57710-1.034103.004001.71830K562HNRNPA2B1
GOLGA2BENSG00000238105.3299.51230111.696901.4229011.2690010.13290K562HNRNPC
GOLGA2BENSG00000238105.3130.87000196.02160-0.582902.237901.51920K562HSPD1
GOLGA2BENSG00000238105.3102.54510216.68790-1.079406.181204.32700K562MAK16
GOLGA2BENSG00000238105.3133.48330253.59680-0.925905.613704.22770K562MBNL1
GOLGA2BENSG00000238105.374.01060177.75190-1.264105.610504.19900K562NAA15
GOLGA2BENSG00000238105.366.21980153.68090-1.214603.652602.47050K562PABPN1
GOLGA2BENSG00000238105.362.27100118.37860-0.926803.252202.19010K562PCBP2
GOLGA2BENSG00000238105.336.58120105.93970-1.534105.578304.51170K562PRPF8
GOLGA2BENSG00000238105.369.81180129.29530-0.889103.481702.74750K562PTBP1
GOLGA2BENSG00000238105.369.77830211.55930-1.6002010.578709.56340K562PUS1
GOLGA2BENSG00000238105.3105.98130206.11220-0.959605.555704.74130K562RBM15
GOLGA2BENSG00000238105.361.12390107.91560-0.820102.199001.47430K562RPS19
GOLGA2BENSG00000238105.3121.32240222.50580-0.875002.345001.58890K562SF3A3
GOLGA2BENSG00000238105.352.75610102.89430-0.963803.517202.54940K562SF3B4
GOLGA2BENSG00000238105.384.54470161.38390-0.932702.490901.35010K562SNRNP200
GOLGA2BENSG00000238105.353.05460102.57990-0.951202.793501.77210K562SUPV3L1
GOLGA2BENSG00000238105.363.74140122.74770-0.945403.745802.79010K562SYNCRIP
GOLGA2BENSG00000238105.3184.63540128.266800.525401.960201.35810K562TARDBP
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for GOLGA2B is not available on ENCORE database.





4 RBPs can affect the splicing of GOLGA2B :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEGOLGA2BENSG00000238105.3chr12-100551126100551223100550942100551034100551305100551517-0.421000.000240.02510excludedHepG2TBRG4
SEGOLGA2BENSG00000238105.3chr12-100551126100551223100550942100551034100551305100551517-0.597000.001300.04753excludedHepG2HNRNPC
A3SSGOLGA2BENSG00000238105.3chr12-100550942100551223100550942100551034100551305100551517-0.409000.000150.05085shorterHepG2TBRG4
RIGOLGA2BENSG00000238105.3chr12-100550942100551517100550942100551034100551305100551517-0.402000.000220.02040excludedHepG2TBRG4
RIGOLGA2BENSG00000238105.3chr12-1005509421005515171005509421005512231005513051005515170.376000.009160.08051includedHepG2SF3A3
RIGOLGA2BENSG00000238105.3chr12-1005509421005515171005509421005512231005513051005515170.452000.002720.02806includedHepG2RBM22

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for GOLGA2B is not avaliable on ENCORE database.