COX20

General Information

Gene Name       : COX20
Gene ID             : ENSG00000203667.9
Essential Gene : Yes

Functions

Localization

Domains (AlphaFold: COX20)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878COX20ENSG00000203667.934.6337.0535.84ENCSR000AEF
HepG2COX20ENSG00000203667.930.7159.1044.91ENCSR985KAT
K562COX20ENSG00000203667.971.9071.0971.50ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for COX20 is not avaliable on ENCORE database.



Proteins bound to RNA
  • COX20 RNA is bound by 12 proteins.  







eCLIP assay for COX20 is not avaliable on ENCORE database.





12 proteins are bound to COX20 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr1245006584245006652+3'-UTR4.776546.83266HepG2CSTF2
chr1245006419245006526+3'-UTR,CDS3.365159.03865HepG2BCLAF1
chr1245006587245006625+3'-UTR3.631126.87411K562CSTF2T
chr1244998937244998981+5'-UTR3.345693.40641HepG2GTF2F1
chr1244998996244999120+5'-UTR,CDS,intron-Proximal3.403274.96115HepG2SRSF1
chr1244998989244999059+5'-UTR,CDS,intron-Proximal5.3174723.39234K562DDX3X
chr1245005492245005558+CDS,intron-Proximal4.225757.27704K562ZNF622
chr1244999056244999152+CDS,intron-Proximal3.114216.00630HepG2GTF2F1
chr1245006340245006393+CDS,intron-Proximal3.372824.61799HepG2BCLAF1
chr1245005495245005562+CDS,intron-Proximal3.013166.70604HepG2BCLAF1
chr1245004062245004185+intron-Distal4.0408611.35846HepG2PTBP1
chr1245003662245003747+intron-Distal4.572444.80665HepG2QKI
chr1244999515244999627+intron-Distal3.399084.59716HepG2HNRNPK
chr1245004164245004252+intron-Distal4.698489.10156HepG2QKI
chr1244999069244999146+intron-Proximal3.186417.46020HepG2PRPF4
chr1244999058244999150+intron-Proximal3.003715.53595HepG2FAM120A
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for COX20 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for COX20 is not available on ENCORE database.

  • 99 RBPs can affect the levels of COX20.  








The Knockdown/knockout RNA-Seq assay for COX20 is not available on ENCORE database.





99 RBPs can affect the gene expression of COX20 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
COX20ENSG00000203667.5571.047801277.04860-1.1611016.3048014.36900HepG2ABCF1
COX20ENSG00000203667.5490.09230697.88560-0.509903.794102.64960HepG2ADAR
COX20ENSG00000203667.51831.059401240.859500.561204.658003.99040HepG2AKAP1
COX20ENSG00000203667.5641.06060910.07010-0.505506.545205.41530HepG2AKAP8L
COX20ENSG00000203667.52156.469801026.693501.0706018.2656016.46130HepG2ASCC1
COX20ENSG00000203667.5513.169901134.05560-1.1440019.4858018.11390HepG2BOP1
COX20ENSG00000203667.5975.819601514.05160-0.633703.043702.01910HepG2CCAR1
COX20ENSG00000203667.5440.47210975.43390-1.1470016.1959014.51080HepG2CIRBP
COX20ENSG00000203667.5564.37150905.61460-0.6823012.3604011.15830HepG2CKAP4
COX20ENSG00000203667.5468.710401041.13620-1.1514017.6378016.07770HepG2CPSF6
COX20ENSG00000203667.51659.099001256.463800.400905.435504.58970HepG2CELF1
COX20ENSG00000203667.5958.038701351.11860-0.496009.664808.41260HepG2DAZAP1
COX20ENSG00000203667.5597.51880837.75370-0.487506.820605.60150HepG2DDX19B
COX20ENSG00000203667.5425.35700790.58560-0.8942011.3619010.09850HepG2DDX21
COX20ENSG00000203667.5592.47240773.49180-0.384602.928801.98600HepG2DDX24
COX20ENSG00000203667.51701.815301021.117900.736807.546706.57190HepG2DDX6
COX20ENSG00000203667.5558.22360866.62790-0.634608.851607.77750HepG2DKC1
COX20ENSG00000203667.5743.18320981.55760-0.401402.574602.00280HepG2EIF2S1
COX20ENSG00000203667.5870.13450682.202900.350902.122101.32190HepG2EIF3D
COX20ENSG00000203667.5561.69110746.47570-0.410303.267502.10310HepG2EIF3G
COX20ENSG00000203667.5545.108401084.70380-0.9927011.5180010.24160HepG2EIF4A3
COX20ENSG00000203667.5977.534101276.81690-0.385303.130902.26660HepG2EIF4G2
COX20ENSG00000203667.5830.315801106.45820-0.414202.926901.80470HepG2ESF1
COX20ENSG00000203667.5794.420201015.27550-0.353902.086201.50500HepG2G3BP1
COX20ENSG00000203667.5914.491601180.24020-0.368002.260901.67900HepG2GPKOW
COX20ENSG00000203667.5628.95380892.88440-0.505502.766101.65390HepG2GRSF1
COX20ENSG00000203667.5400.87220709.49480-0.823608.955707.89100HepG2HNRNPA1
COX20ENSG00000203667.5491.50380789.16220-0.683106.699705.66020HepG2HNRNPC
COX20ENSG00000203667.51523.963901028.180200.567606.043805.04060HepG2HNRNPK
COX20ENSG00000203667.51678.996401230.799500.447908.689607.55870HepG2HNRNPL
COX20ENSG00000203667.5864.180601126.32220-0.382202.613801.99890HepG2HNRNPLL
COX20ENSG00000203667.5750.092001115.81770-0.573004.038002.53840HepG2HSPD1
COX20ENSG00000203667.5778.942401082.02090-0.474104.982304.03730HepG2IGF2BP1
COX20ENSG00000203667.5995.70230828.030200.265902.722301.70920HepG2KIF1C
COX20ENSG00000203667.5656.141501597.69300-1.283908.549507.08170HepG2LARP4
COX20ENSG00000203667.5554.817901094.90240-0.9807012.4458011.09300HepG2MAGOH
COX20ENSG00000203667.5737.64310998.67730-0.437103.338402.51630HepG2NSUN2
COX20ENSG00000203667.51093.53660775.997000.494806.891205.64990HepG2PARN
COX20ENSG00000203667.51061.49260785.634900.434105.492504.43890HepG2PRPF4
COX20ENSG00000203667.5843.663401278.88760-0.600207.456106.53880HepG2PUF60
COX20ENSG00000203667.5757.789901356.59030-0.8401015.1706013.67820HepG2PUM2
COX20ENSG00000203667.52676.758701042.942201.3597014.5606013.06060HepG2RAVER1
COX20ENSG00000203667.51267.84600982.467600.367803.312202.57970HepG2RBM25
COX20ENSG00000203667.5637.383201112.41010-0.8035014.8594013.79310HepG2NELFE
COX20ENSG00000203667.5810.321701036.09940-0.354603.642502.94820HepG2RECQL
COX20ENSG00000203667.5420.24540663.80290-0.659506.334905.44590HepG2RPS19
COX20ENSG00000203667.5684.70450968.10630-0.499702.993102.16250HepG2RPS3A
COX20ENSG00000203667.5697.551501114.85450-0.676507.650506.52840HepG2SF3B1
COX20ENSG00000203667.5677.961101040.63960-0.618209.366508.37730HepG2SF3B4
COX20ENSG00000203667.5986.893501226.17930-0.313204.040603.21600HepG2SLBP
COX20ENSG00000203667.5973.76770814.180700.258102.529401.91010HepG2SMN1
COX20ENSG00000203667.5764.296501086.22220-0.507107.058906.38650HepG2SRSF1
COX20ENSG00000203667.51712.21010883.716600.9541029.0690027.64570HepG2SRSF9
COX20ENSG00000203667.51118.913401304.50070-0.221402.004201.54980HepG2SSB
COX20ENSG00000203667.51033.225801436.04290-0.474908.766807.76370HepG2SUCLG1
COX20ENSG00000203667.5622.77780871.04270-0.484004.046202.92020HepG2SUPT6H
COX20ENSG00000203667.5868.261401097.73260-0.338302.308701.63830HepG2TARDBP
COX20ENSG00000203667.5675.216601091.57140-0.693002.983201.87580HepG2TBRG4
COX20ENSG00000203667.5932.27070548.799600.764408.441306.88990HepG2TFIP11
COX20ENSG00000203667.5392.22060761.82370-0.9578014.4853013.49890HepG2TIAL1
COX20ENSG00000203667.51324.21670768.555000.7848018.4597017.17350HepG2TRIM56
COX20ENSG00000203667.5645.562401103.32240-0.773208.473907.37180HepG2U2AF1
COX20ENSG00000203667.5907.527001322.38860-0.543104.431303.35470HepG2UBE2L3
COX20ENSG00000203667.5874.49540483.695400.8543010.607009.12570HepG2UCHL5
COX20ENSG00000203667.5755.89390937.10730-0.310002.830901.77290HepG2UTP18
COX20ENSG00000203667.5551.99120880.21900-0.6732010.287509.24970HepG2UTP3
COX20ENSG00000203667.51452.035901025.528000.501602.921101.62470HepG2XRCC5
COX20ENSG00000203667.5538.03020775.31000-0.527106.857205.87670HepG2ZC3H8
COX20ENSG00000203667.51422.841301002.705200.5048010.374109.48500HepG2ZNF622
COX20ENSG00000203667.51484.397102183.29740-0.556606.628304.74350K562ABCF1
COX20ENSG00000203667.51562.803201198.780500.382505.321304.57570K562AGGF1
COX20ENSG00000203667.52571.688601801.138500.513706.953604.88590K562APOBEC3C
COX20ENSG00000203667.5771.853001843.53330-1.2561025.0951023.51750K562AQR
COX20ENSG00000203667.5742.383201007.59080-0.440705.285903.94100K562BCLAF1
COX20ENSG00000203667.51179.767501491.07020-0.337802.263401.48030K562BOP1
COX20ENSG00000203667.5787.297901158.20390-0.556905.756403.94440K562CIRBP
COX20ENSG00000203667.51440.948502210.78430-0.617503.760902.48900K562CNOT7
COX20ENSG00000203667.5789.521501585.43000-1.0058021.2658019.06950K562CPSF6
COX20ENSG00000203667.5546.57910764.40760-0.483904.333702.97200K562CSTF2
COX20ENSG00000203667.52595.296101924.907100.431007.948306.92100K562DDX47
COX20ENSG00000203667.5490.55200751.97920-0.616305.057403.80520K562EFTUD2
COX20ENSG00000203667.5763.21820509.420900.583102.755301.75540K562EIF3A
COX20ENSG00000203667.51338.11190873.053100.616006.247905.06950K562EIF3G
COX20ENSG00000203667.5366.03040765.88410-1.065207.863406.48040K562EIF4A3
COX20ENSG00000203667.51020.41570728.654200.485803.728102.39290K562FKBP4
COX20ENSG00000203667.51170.765501613.14780-0.462404.409203.32810K562FMR1
COX20ENSG00000203667.51126.26020857.341100.393502.182901.56540K562G3BP2
COX20ENSG00000203667.51016.719801513.69120-0.574106.884405.63050K562GPKOW
COX20ENSG00000203667.5690.026101039.31780-0.590907.142805.48160K562HNRNPA1
COX20ENSG00000203667.5427.99360839.46250-0.9719013.5987012.36020K562HNRNPC
COX20ENSG00000203667.51927.652501290.854100.578405.589404.20440K562HNRNPM
COX20ENSG00000203667.52150.501601150.936700.9018023.6464021.22010K562HNRNPU
COX20ENSG00000203667.51624.354901323.806300.295102.060701.35920K562KIF1C
COX20ENSG00000203667.5968.549101765.40220-0.866104.304401.67810K562LARP4
COX20ENSG00000203667.5593.031701135.71710-0.9374015.6140013.47940K562MAGOH
COX20ENSG00000203667.5599.665601477.53340-1.3010030.0463027.21420K562METAP2
COX20ENSG00000203667.53041.936202232.633700.446105.323103.20520K562NOL12
COX20ENSG00000203667.51097.169401344.45430-0.293204.025603.14360K562NSUN2
COX20ENSG00000203667.5620.155701010.54690-0.704408.373406.63600K562PCBP2
COX20ENSG00000203667.5537.01840752.65410-0.487003.687902.62350K562PSIP1
COX20ENSG00000203667.51377.345501103.403900.319802.844802.17220K562PTBP1
COX20ENSG00000203667.52903.875402368.689300.293803.349802.17160K562PUM1
COX20ENSG00000203667.52360.088301237.110900.9318016.3115015.03240K562PUS1
COX20ENSG00000203667.51583.602201205.333200.393704.703603.95080K562RBM15
COX20ENSG00000203667.5740.336701058.15220-0.515304.953103.78840K562RBM22
COX20ENSG00000203667.5969.66000745.481200.379202.344801.59550K562RPS19
COX20ENSG00000203667.51052.66910748.304400.492303.096301.68750K562RRP9
COX20ENSG00000203667.51186.78300852.864400.476604.170002.36050K562SDAD1
COX20ENSG00000203667.5952.649601439.58970-0.595605.358403.97200K562SF3B1
COX20ENSG00000203667.5498.84860891.81510-0.8381012.8725010.94280K562SF3B4
COX20ENSG00000203667.5794.918301081.67910-0.444404.274303.40110K562SRSF1
COX20ENSG00000203667.5784.441801056.02770-0.428904.014603.00180K562TIA1
COX20ENSG00000203667.51694.784201420.054700.255102.797501.51960K562TROVE2
COX20ENSG00000203667.51167.84080858.548400.443804.874903.81080K562U2AF2
COX20ENSG00000203667.51542.569701268.442900.282203.623602.66400K562WDR43
COX20ENSG00000203667.51470.59130794.974100.887305.586203.14210K562XRCC6
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for COX20 is not available on ENCORE database.





28 RBPs can affect the splicing of COX20 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SECOX20ENSG00000203667.5chr1+245005245245005360244998623244999058245005496245005560-0.199000.000000.00000excludedHepG2G3BP1
SECOX20ENSG00000203667.5chr1+245005245245005360244998623244999058245005496245005560-0.538000.000000.00000excludedK562SRSF1
SECOX20ENSG00000203667.5chr1+245005245245005360244998623244999058245005496245005560-0.114000.000940.01985excludedK562SF3B4
SECOX20ENSG00000203667.5chr1+245005245245005360244998960244999058245005496245005560-0.211000.000000.00000excludedK562PRPF8
SECOX20ENSG00000203667.5chr1+245005245245005360244998623244999058245005496245005560-0.205000.000000.00000excludedHepG2RBM22
SECOX20ENSG00000203667.5chr1+245005245245005360244998623244999058245005496245005560-0.094000.000230.03937excludedK562MATR3
SECOX20ENSG00000203667.5chr1+245005245245005360244998623244999058245005496245005560-0.192000.000080.08337excludedHepG2CSTF2
SECOX20ENSG00000203667.5chr1+245005245245005360244998960244999058245005496245005560-0.354000.000000.00000excludedHepG2PRPF8
SECOX20ENSG00000203667.5chr1+245005245245005360244998623244999058245005496245005560-0.144000.000360.05035excludedHepG2HNRNPM
SECOX20ENSG00000203667.5chr1+2450052452450053602449986232449990582450054962450055600.060000.003020.06517includedHepG2HNRNPK
SECOX20ENSG00000203667.5chr1+245005245245005360244998623244999058245005496245005560-0.127000.000430.03877excludedHepG2TBRG4
SECOX20ENSG00000203667.5chr1+245005245245005360244998960244999058245005496245005560-0.344000.000000.00006excludedHepG2U2AF2
SECOX20ENSG00000203667.5chr1+245005245245005360244998623244999058245005496245005560-0.134000.000000.00030excludedHepG2AKAP1
SECOX20ENSG00000203667.5chr1+245005245245005360244998623244999058245005496245005560-0.128000.000040.00068excludedK562AQR
SECOX20ENSG00000203667.5chr1+245005245245005360244998623244999058245005496245005560-0.103000.000560.02452excludedK562FXR1
SECOX20ENSG00000203667.5chr1+245005245245005360244998623244999058245005496245005560-0.202000.000000.00008excludedHepG2BCLAF1
SECOX20ENSG00000203667.5chr1+245005245245005360244998623244999058245005496245005560-0.162000.000020.00301excludedHepG2NCBP2
SECOX20ENSG00000203667.5chr1+245005245245005360244998623244999058245005496245005560-0.117000.000560.03224excludedHepG2PTBP1
SECOX20ENSG00000203667.5chr1+245005245245005360244998623244999058245005496245005560-0.259000.000000.00032excludedHepG2HNRNPA1
SECOX20ENSG00000203667.5chr1+245005245245005360244998623244999058245005496245005560-0.158000.000360.02841excludedHepG2FTO
SECOX20ENSG00000203667.5chr1+2450052452450053602449989602449990582450054962450055600.124000.000390.06168includedK562LARP4
SECOX20ENSG00000203667.5chr1+245005245245005360244998623244999058245005496245005560-0.141000.000080.00703excludedK562EFTUD2
SECOX20ENSG00000203667.5chr1+245005245245005360244998623244999058245005496245005560-0.266000.000000.00000excludedHepG2MATR3
SECOX20ENSG00000203667.5chr1+2450052452450053602449986232449990582450054962450055600.082000.000010.00149includedHepG2DDX6
SECOX20ENSG00000203667.5chr1+245005245245005360244998623244999058245005496245005560-0.133000.000290.03809excludedHepG2LARP4
SECOX20ENSG00000203667.5chr1+245005245245005360244998623244999058245005496245005560-0.617000.000000.00000excludedHepG2SRSF1
SECOX20ENSG00000203667.5chr1+245005245245005360244998623244999058245005496245005560-0.384000.000000.00000excludedHepG2SF3A3
SECOX20ENSG00000203667.5chr1+245005245245005360244998623244999058245005496245005560-0.245000.000000.00000excludedHepG2SSB
SECOX20ENSG00000203667.5chr1+245005245245005360244998623244999058245005496245005560-0.455000.000000.00000excludedHepG2TIAL1
SECOX20ENSG00000203667.5chr1+245005245245005360244998623244999058245005496245005560-0.207000.000000.00001excludedHepG2SF3B4
SECOX20ENSG00000203667.5chr1+245005245245005360244998623244999058245005496245005560-0.106000.000590.01296excludedK562U2AF2
SECOX20ENSG00000203667.5chr1+245005225245005360244998957244999058245005496245005560-0.176000.000360.09714excludedHepG2XRN2
SECOX20ENSG00000203667.5chr1+245005245245005360244998623244999058245005496245005560-0.144000.000090.02757excludedHepG2XRCC6
SECOX20ENSG00000203667.5chr1+245005245245005360244998960244999058245005496245005560-0.192000.000000.00128excludedHepG2PRPF4

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for COX20 is not avaliable on ENCORE database.