COPB2

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	COPB2	ENSG00000184432.9	83.29	79.26	81.28	ENCSR000AEF
HepG2	COPB2	ENSG00000184432.9	97.23	125.07	111.15	ENCSR985KAT
K562	COPB2	ENSG00000184432.9	84.51	87.55	86.03	ENCSR000AEO

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for COPB2 is not avaliable on ENCORE database.

Proteins bound to RNA

COPB2 RNA is bound by 38 proteins.

eCLIP assay for COPB2 is not avaliable on ENCORE database.

38 proteins are bound to COPB2 RNA:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr3	139102228	139102281	-	3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal	3.13711	5.48629	K562	BUD13
chr3	139076621	139076663	-	3'-UTR,intron-Distal,intron-Proximal	3.87634	9.90371	K562	PABPC4
chr3	139102154	139102213	-	3'-UTR,5'-UTR,CDS,intron-Distal	3.99225	8.70187	K562	ZNF622
chr3	139076632	139076802	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.89058	7.61375	HepG2	ZNF800
chr3	139076656	139076714	-	3'-UTR,CDS,intron-Distal,intron-Proximal	4.74130	24.95421	HepG2	BCLAF1
chr3	139076624	139076708	-	3'-UTR,intron-Distal,intron-Proximal	5.20798	6.81022	K562	IGF2BP1
chr3	139102139	139102201	-	3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal	3.31677	5.04716	K562	SND1
chr3	139076629	139076791	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.05757	8.98582	K562	PUM1
chr3	139102246	139102279	-	3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal	4.00440	4.03920	K562	FTO
chr3	139102258	139102277	-	3'-UTR,5'-UTR,CDS,intron-Distal	3.01908	5.75815	K562	DDX3X
chr3	139076562	139076638	-	3'-UTR,intron-Distal,intron-Proximal	4.81925	9.76393	HepG2	SUB1
chr3	139076621	139076656	-	3'-UTR,intron-Distal,intron-Proximal	5.16530	12.89578	HepG2	BCLAF1
chr3	139076464	139076546	-	3'-UTR,intron-Distal	5.52415	10.73555	HepG2	SUB1
chr3	139076529	139076588	-	3'-UTR,intron-Distal,intron-Proximal	4.57348	5.01757	K562	IGF2BP2
chr3	139108385	139108416	-	5'-UTR,CDS,intron-Distal,intron-Proximal	3.49841	3.10855	K562	FTO
chr3	139108388	139108485	-	5'-UTR,CDS,intron-Distal,intron-Proximal	3.51657	14.19097	K562	DDX3X
chr3	139077038	139077113	-	CDS,intron-Distal,intron-Proximal	3.81934	10.37952	HepG2	GRWD1
chr3	139092506	139092545	-	CDS,intron-Distal,intron-Proximal	3.20569	7.25123	K562	LIN28B
chr3	139094390	139094457	-	CDS,intron-Distal,intron-Proximal	4.39092	9.38999	HepG2	G3BP1
chr3	139090532	139090607	-	CDS,intron-Distal,intron-Proximal	3.93765	13.28834	HepG2	PRPF8
chr3	139087025	139087084	-	CDS,intron-Distal	3.54515	4.72530	HepG2	G3BP1
chr3	139092493	139092553	-	CDS,intron-Distal,intron-Proximal	3.11032	3.34872	HepG2	CDC40
chr3	139098221	139098279	-	CDS,intron-Distal,intron-Proximal	4.53034	12.43877	HepG2	BCLAF1
chr3	139092196	139092256	-	CDS,intron-Distal,intron-Proximal	3.02566	4.37901	HepG2	GRSF1
chr3	139077838	139077852	-	CDS,intron-Distal,intron-Proximal	3.77275	7.45042	K562	UCHL5
chr3	139080055	139080120	-	CDS,intron-Distal	3.69475	8.50755	HepG2	BCLAF1
chr3	139090632	139090741	-	CDS,intron-Distal,intron-Proximal	3.56134	17.35929	HepG2	U2AF2
chr3	139092239	139092255	-	CDS,intron-Distal,intron-Proximal	3.31996	5.23342	HepG2	G3BP1
chr3	139097997	139098016	-	CDS,intron-Distal,intron-Proximal	4.13543	4.15726	HepG2	G3BP1
chr3	139093334	139093429	-	CDS,intron-Distal	4.19122	6.46034	K562	SND1
chr3	139092515	139092533	-	CDS,intron-Distal	3.94459	8.78144	HepG2	PRPF8
chr3	139088148	139088207	-	CDS,intron-Distal,intron-Proximal	3.16911	7.43909	HepG2	BCLAF1
chr3	139079958	139080012	-	CDS,intron-Distal	4.01758	6.74775	HepG2	G3BP1
chr3	139081248	139081304	-	CDS,intron-Distal,intron-Proximal	3.09879	9.00124	K562	ZNF622
chr3	139078111	139078125	-	CDS,intron-Distal,intron-Proximal	3.02564	3.06971	K562	YBX3
chr3	139088348	139088411	-	CDS,intron-Distal,intron-Proximal	3.27657	3.21655	K562	U2AF2
chr3	139077839	139077898	-	CDS,intron-Distal,intron-Proximal	4.17578	4.99016	K562	ZNF800
chr3	139088359	139088403	-	CDS,intron-Distal,intron-Proximal	3.67781	6.26686	K562	SF3B4
chr3	139080108	139080138	-	CDS,intron-Distal,intron-Proximal	3.09840	7.60260	K562	ZNF622
chr3	139088352	139088387	-	CDS,intron-Distal,intron-Proximal	4.92224	6.00552	HepG2	G3BP1
chr3	139098219	139098276	-	CDS,intron-Distal,intron-Proximal	4.43096	4.84481	HepG2	PPIG
chr3	139080023	139080108	-	CDS,intron-Distal	3.14495	11.24782	K562	ZNF622
chr3	139094327	139094390	-	CDS,intron-Distal,intron-Proximal	3.57447	7.01771	HepG2	G3BP1
chr3	139092543	139092603	-	CDS,intron-Distal	3.57798	6.11569	K562	FMR1
chr3	139077938	139077976	-	CDS,intron-Distal,intron-Proximal	3.43215	4.04629	HepG2	G3BP1
chr3	139090615	139090723	-	CDS,intron-Distal,intron-Proximal	4.03856	13.25634	K562	U2AF2
chr3	139096963	139097031	-	CDS,intron-Distal,intron-Proximal	3.41747	6.03511	HepG2	G3BP1
chr3	139078168	139078205	-	CDS,intron-Distal,intron-Proximal	4.20318	8.73668	K562	FMR1
chr3	139079965	139080040	-	CDS,intron-Distal	3.61388	9.72069	K562	UCHL5
chr3	139074561	139074623	-	CDS,intron-Distal	3.96371	6.17334	HepG2	U2AF2
chr3	139092211	139092255	-	CDS,intron-Distal,intron-Proximal	3.32402	8.58659	K562	LIN28B
chr3	139092152	139092207	-	CDS,intron-Distal	4.22830	14.68146	HepG2	BCLAF1
chr3	139092211	139092239	-	CDS,intron-Distal	4.28442	9.37200	HepG2	G3BP1
chr3	139090563	139090594	-	CDS,intron-Distal,intron-Proximal	3.79648	3.04123	K562	LIN28B
chr3	139092054	139092141	-	CDS,intron-Distal,intron-Proximal	3.88418	7.94246	HepG2	G3BP1
chr3	139094318	139094445	-	CDS,intron-Distal,intron-Proximal	3.28897	8.70156	HepG2	GRWD1
chr3	139077044	139077100	-	CDS,intron-Distal	3.01897	12.09972	K562	ZNF622
chr3	139086986	139087024	-	CDS,intron-Distal,intron-Proximal	3.63551	3.04123	K562	LIN28B
chr3	139085513	139085561	-	CDS,intron-Distal	4.17374	6.90236	K562	RPS3
chr3	139085555	139085589	-	CDS,intron-Distal	3.13256	5.56979	K562	YBX3
chr3	139092473	139092515	-	CDS,intron-Distal,intron-Proximal	4.46319	13.10320	HepG2	PRPF8
chr3	139092149	139092211	-	CDS,intron-Distal	5.51086	13.70562	K562	LIN28B
chr3	139088356	139088375	-	CDS,intron-Distal	4.61184	5.23259	HepG2	BCLAF1
chr3	139078120	139078183	-	CDS,intron-Distal	5.97567	9.52979	K562	FXR2
chr3	139093317	139093431	-	CDS,intron-Distal,intron-Proximal	3.03862	7.54225	K562	DDX24
chr3	139079987	139079998	-	CDS,intron-Distal	4.82147	5.79022	K562	YBX3
chr3	139090563	139090629	-	CDS,intron-Distal,intron-Proximal	3.89906	7.66738	HepG2	G3BP1
chr3	139079922	139079936	-	CDS,intron-Distal,intron-Proximal	4.83969	6.86924	K562	LIN28B
chr3	139085937	139085990	-	CDS,intron-Distal,intron-Proximal	4.28580	7.39346	K562	DDX24
chr3	139077976	139078021	-	CDS,intron-Distal,intron-Proximal	4.65943	4.83675	HepG2	G3BP1
chr3	139080073	139080114	-	CDS,intron-Distal	3.42792	3.50786	HepG2	G3BP1
chr3	139077588	139077637	-	CDS,intron-Distal,intron-Proximal	3.48343	6.86395	HepG2	BCLAF1
chr3	139092059	139092152	-	CDS,intron-Distal	3.94882	13.36544	HepG2	BCLAF1
chr3	139076716	139076793	-	CDS,intron-Distal	3.43796	15.85918	K562	ZNF622
chr3	139086985	139087018	-	CDS,intron-Distal,intron-Proximal	3.73324	4.96751	K562	RPS3
chr3	139090566	139090613	-	CDS,intron-Distal	3.54550	9.41803	HepG2	BCLAF1
chr3	139081246	139081340	-	CDS,intron-Distal,intron-Proximal	4.45282	5.89812	K562	GRWD1
chr3	139086958	139087034	-	CDS,intron-Distal,intron-Proximal	5.80767	5.68502	HepG2	PRPF8
chr3	139079996	139080055	-	CDS,intron-Distal	3.11390	5.86176	HepG2	BCLAF1
chr3	139088183	139088262	-	CDS,intron-Distal,intron-Proximal	3.50081	4.28282	K562	EFTUD2
chr3	139096881	139096986	-	CDS,intron-Distal,intron-Proximal	3.85880	9.97366	K562	LIN28B
chr3	139078129	139078168	-	CDS,intron-Distal	3.04820	4.83540	K562	FMR1
chr3	139080020	139080063	-	CDS,intron-Distal	3.30800	4.19763	K562	DDX24
chr3	139079970	139079987	-	CDS,intron-Distal	4.88260	6.26288	K562	YBX3
chr3	139092507	139092542	-	CDS,intron-Distal,intron-Proximal	4.43934	5.79466	HepG2	RPS3
chr3	139085565	139085618	-	CDS,intron-Distal,intron-Proximal	3.24542	4.55847	HepG2	G3BP1
chr3	139092210	139092269	-	CDS,intron-Distal,intron-Proximal	3.75555	13.28567	K562	BUD13
chr3	139077852	139077884	-	CDS,intron-Distal	3.64990	9.66555	K562	UCHL5
chr3	139081247	139081348	-	CDS,intron-Distal,intron-Proximal	3.22562	7.43008	HepG2	G3BP1
chr3	139092204	139092266	-	CDS,intron-Distal,intron-Proximal	4.07409	14.18436	K562	SF3B4
chr3	139098220	139098250	-	CDS,intron-Distal,intron-Proximal	4.51445	4.96722	HepG2	G3BP1
chr3	139077585	139077619	-	CDS,intron-Distal,intron-Proximal	3.56854	5.52031	HepG2	GRWD1
chr3	139098302	139098357	-	CDS,intron-Distal,intron-Proximal	4.17001	4.69223	K562	SF3B4
chr3	139078183	139078203	-	CDS,intron-Distal	3.75657	3.12746	HepG2	GRWD1
chr3	139092148	139092205	-	CDS,intron-Distal	3.15255	5.43812	K562	UCHL5
chr3	139094309	139094330	-	CDS,intron-Distal,intron-Proximal	3.34836	7.13168	HepG2	BCLAF1
chr3	139092506	139092532	-	CDS,intron-Distal,intron-Proximal	3.49280	3.77614	HepG2	G3BP1
chr3	139092199	139092276	-	CDS,intron-Distal,intron-Proximal	3.70956	12.98788	K562	GPKOW
chr3	139092112	139092212	-	CDS,intron-Distal	3.32617	5.26845	K562	RPS3
chr3	139078183	139078205	-	CDS,intron-Distal,intron-Proximal	3.90063	4.19414	K562	FXR2
chr3	139076718	139076785	-	CDS,intron-Distal	3.17754	6.78893	HepG2	GRWD1
chr3	139097019	139097032	-	CDS,intron-Distal,intron-Proximal	3.40480	3.68829	K562	YBX3
chr3	139092544	139092593	-	CDS,intron-Distal	3.87282	6.97808	HepG2	BCLAF1
chr3	139092154	139092211	-	CDS,intron-Distal	3.49086	8.79196	HepG2	G3BP1
chr3	139080104	139080143	-	CDS,intron-Distal,intron-Proximal	3.08546	6.76988	K562	BUD13
chr3	139098226	139098286	-	CDS,intron-Distal	4.78580	8.08662	K562	DDX24
chr3	139080114	139080180	-	CDS,intron-Distal,intron-Proximal	4.08994	5.16342	K562	SF3B4
chr3	139078103	139078169	-	CDS,intron-Distal,intron-Proximal	4.35151	5.05356	HepG2	PRPF8
chr3	139079923	139079957	-	CDS,intron-Distal	5.44311	13.30071	K562	YBX3
chr3	139088302	139088328	-	CDS,intron-Distal,intron-Proximal	3.96159	4.76554	HepG2	BCLAF1
chr3	139092545	139092601	-	CDS,intron-Distal	4.51551	5.86049	K562	LIN28B
chr3	139098241	139098299	-	CDS,intron-Distal	3.11074	4.58595	K562	SND1
chr3	139076714	139076780	-	CDS,intron-Distal	4.38474	16.67904	HepG2	BCLAF1
chr3	139077585	139077625	-	CDS,intron-Distal,intron-Proximal	3.58906	8.44067	K562	UCHL5
chr3	139092509	139092544	-	CDS,intron-Distal	3.02069	5.86176	HepG2	BCLAF1
chr3	139078174	139078205	-	CDS,intron-Distal,intron-Proximal	5.15352	9.30647	K562	LIN28B
chr3	139077852	139077879	-	CDS,intron-Distal	3.13805	4.50748	HepG2	GRWD1
chr3	139078201	139078204	-	CDS,intron-Distal	4.24557	9.87532	K562	YBX3
chr3	139102080	139102155	-	CDS,intron-Distal,intron-Proximal	4.04440	5.51636	K562	GPKOW
chr3	139085940	139085984	-	CDS,intron-Distal,intron-Proximal	3.41363	4.31813	HepG2	G3BP1
chr3	139090513	139090597	-	CDS,intron-Distal,intron-Proximal	3.23816	12.16272	K562	PRPF8
chr3	139080100	139080137	-	CDS,intron-Distal	3.73569	3.45590	K562	GRWD1
chr3	139085955	139086011	-	CDS,intron-Distal,intron-Proximal	3.11607	4.77826	K562	AQR
chr3	139077807	139077855	-	CDS,intron-Distal,intron-Proximal	5.49651	21.49406	HepG2	PRPF8
chr3	139077840	139077932	-	CDS,intron-Distal	3.49225	12.56545	HepG2	BCLAF1
chr3	139074554	139074622	-	CDS,intron-Distal	4.23798	4.70109	K562	U2AF2
chr3	139087047	139087129	-	CDS,intron-Distal	4.42027	9.67356	K562	RPS3
chr3	139077623	139077654	-	CDS,intron-Distal,intron-Proximal	3.39314	3.77614	HepG2	G3BP1
chr3	139092507	139092544	-	CDS,intron-Distal,intron-Proximal	3.28935	3.82816	HepG2	GRSF1
chr3	139092075	139092149	-	CDS,intron-Distal	4.15485	8.58502	K562	LIN28B
chr3	139077635	139077654	-	CDS,intron-Distal,intron-Proximal	3.39110	4.30396	K562	UCHL5
chr3	139090702	139090735	-	intron-Distal,intron-Proximal	4.49077	9.29543	K562	AQR
chr3	139097078	139097167	-	intron-Distal,intron-Proximal	3.33108	4.14287	K562	KHSRP
chr3	139100448	139100668	-	intron-Distal	3.02201	3.31127	HepG2	MATR3
chr3	139097650	139097694	-	intron-Distal	3.80859	6.19377	K562	KHSRP
chr3	139088016	139088062	-	intron-Distal,intron-Proximal	3.30396	4.48980	K562	PRPF8
chr3	139098170	139098219	-	intron-Distal,intron-Proximal	3.99211	4.98250	K562	AQR
chr3	139085621	139085667	-	intron-Distal,intron-Proximal	5.23016	5.40008	K562	SF3B4
chr3	139079922	139079923	-	intron-Distal,intron-Proximal	5.17686	10.30743	K562	YBX3
chr3	139106051	139106101	-	intron-Distal	4.05164	5.16181	K562	PTBP1
chr3	139092266	139092293	-	intron-Distal,intron-Proximal	3.15862	4.19169	K562	SF3B4
chr3	139077483	139077529	-	intron-Distal,intron-Proximal	3.56631	7.16774	K562	AQR
chr3	139084320	139084397	-	intron-Distal	3.12365	3.46325	HepG2	SUGP2
chr3	139088403	139088452	-	intron-Distal,intron-Proximal	4.42311	5.63851	K562	SF3B4
chr3	139081050	139081137	-	intron-Distal	3.82116	3.37414	K562	CSTF2T
chr3	139106782	139106856	-	intron-Distal	3.97533	4.24993	K562	HNRNPL
chr3	139092843	139092869	-	intron-Distal	4.97249	5.85485	K562	KHSRP
chr3	139090791	139090873	-	intron-Distal	4.40999	8.55611	K562	KHSRP
chr3	139097696	139097715	-	intron-Distal	4.16568	7.22994	K562	KHSRP
chr3	139100446	139100545	-	intron-Distal	5.23388	6.08961	HepG2	PTBP1
chr3	139106040	139106102	-	intron-Distal	4.70182	6.08961	HepG2	PTBP1
chr3	139092779	139092802	-	intron-Distal	3.73845	8.43196	K562	KHSRP
chr3	139100199	139100258	-	intron-Distal	4.36337	3.79000	HepG2	U2AF2
chr3	139088853	139088956	-	intron-Distal	4.32457	4.07750	HepG2	HNRNPK
chr3	139091015	139091077	-	intron-Distal	3.24561	7.02852	K562	KHSRP
chr3	139100447	139100544	-	intron-Distal	4.32740	10.46906	K562	PTBP1
chr3	139083099	139083176	-	intron-Distal	4.63850	6.36848	HepG2	SUGP2
chr3	139092802	139092843	-	intron-Distal	3.62213	7.63715	K562	KHSRP
chr3	139090677	139090702	-	intron-Distal,intron-Proximal	3.70823	8.77060	K562	AQR
chr3	139098132	139098196	-	intron-Distal,intron-Proximal	4.72030	4.31512	K562	KHSRP
chr3	139081429	139081511	-	intron-Distal,intron-Proximal	3.32986	4.16517	K562	KHSRP
chr3	139092045	139092054	-	intron-Distal,intron-Proximal	5.49211	7.81430	K562	AQR
chr3	139091979	139092045	-	intron-Distal,intron-Proximal	3.92566	9.84476	K562	AQR
chr3	139084394	139084523	-	intron-Distal	4.55358	6.01663	K562	MATR3
chr3	139100448	139100599	-	intron-Distal	4.00203	9.86758	K562	MATR3
chr3	139097652	139097797	-	intron-Distal,intron-Proximal	5.01568	6.95802	HepG2	KHSRP
chr3	139090469	139090513	-	intron-Distal,intron-Proximal	3.15659	6.04213	K562	PRPF8
chr3	139083047	139083099	-	intron-Distal	4.60570	4.78128	HepG2	SUGP2
chr3	139091713	139091798	-	intron-Distal	4.08090	7.44395	HepG2	KHSRP
chr3	139081161	139081225	-	intron-Distal,intron-Proximal	4.23675	3.24603	K562	KHSRP
chr3	139093011	139093106	-	intron-Distal,intron-Proximal	4.75600	7.00602	HepG2	KHSRP
chr3	139088857	139088958	-	intron-Distal	5.78725	13.19203	HepG2	QKI
chr3	139092732	139092837	-	intron-Distal,intron-Proximal	5.59218	11.75209	HepG2	KHSRP
chr3	139077778	139077839	-	intron-Distal,intron-Proximal	4.52156	8.30573	K562	AQR
chr3	139092751	139092779	-	intron-Distal	3.35056	5.82594	K562	KHSRP
chr3	139080986	139081161	-	intron-Distal,intron-Proximal	3.65753	6.59733	K562	KHSRP
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

eCLIP assay for COPB2 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for COPB2 is not available on ENCORE database.
81 RBPs can affect the levels of COPB2.

The Knockdown/knockout RNA-Seq assay for COPB2 is not available on ENCORE database.

81 RBPs can affect the gene expression of COPB2 :

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
COPB2	ENSG00000184432.5	2224.33750	3981.60870	-0.84000	14.59730	12.58720	HepG2	ADAR
COPB2	ENSG00000184432.5	3695.25370	4568.92650	-0.30620	5.35930	4.32630	HepG2	AKAP8L
COPB2	ENSG00000184432.5	5724.10730	6858.60640	-0.26090	4.66420	3.81340	HepG2	AUH
COPB2	ENSG00000184432.5	3635.09840	5069.36200	-0.47980	6.27130	5.41240	HepG2	BOP1
COPB2	ENSG00000184432.5	4912.80450	6882.29890	-0.48630	2.46450	1.55140	HepG2	CCAR1
COPB2	ENSG00000184432.5	2927.77740	4205.77340	-0.52260	17.02400	15.36030	HepG2	DDX19B
COPB2	ENSG00000184432.5	3403.60150	5284.89040	-0.63480	3.87580	2.72890	HepG2	DDX59
COPB2	ENSG00000184432.5	3248.93300	4009.32500	-0.30340	4.45240	3.57620	HepG2	DNAJC21
COPB2	ENSG00000184432.5	3240.83040	3973.83470	-0.29420	6.47760	5.53830	HepG2	DNAJC2
COPB2	ENSG00000184432.5	3364.97440	4058.35060	-0.27030	2.61140	1.48160	HepG2	EIF2S2
COPB2	ENSG00000184432.5	2545.60350	4715.45790	-0.88940	12.59110	11.25620	HepG2	EIF4A3
COPB2	ENSG00000184432.5	5035.61550	7874.70920	-0.64510	24.36170	22.88150	HepG2	ETF1
COPB2	ENSG00000184432.5	4271.49620	3549.81790	0.26690	2.38250	1.31700	HepG2	FASTKD2
COPB2	ENSG00000184432.5	2602.04020	4661.94390	-0.84130	4.25620	3.00030	HepG2	FTO
COPB2	ENSG00000184432.5	3735.79930	4341.57740	-0.21680	2.94980	1.94450	HepG2	HDGF
COPB2	ENSG00000184432.5	2870.41700	4502.32750	-0.64940	11.16550	9.85130	HepG2	HNRNPC
COPB2	ENSG00000184432.5	4705.41880	5696.90880	-0.27590	4.99510	4.06740	HepG2	HNRNPF
COPB2	ENSG00000184432.5	4242.07150	5374.94140	-0.34150	9.70060	8.51400	HepG2	HNRNPL
COPB2	ENSG00000184432.5	3521.38960	5034.56460	-0.51570	6.15400	5.25480	HepG2	HNRNPLL
COPB2	ENSG00000184432.5	3062.46560	4472.56290	-0.54640	16.21300	14.84050	HepG2	HNRNPU
COPB2	ENSG00000184432.5	4720.31080	5609.80080	-0.24910	2.77030	2.04560	HepG2	IGF2BP1
COPB2	ENSG00000184432.5	2810.93180	4568.57990	-0.70070	35.38180	33.16980	HepG2	ILF2
COPB2	ENSG00000184432.5	3395.42280	4157.01050	-0.29200	6.52140	4.99050	HepG2	KIF1C
COPB2	ENSG00000184432.5	5317.98800	4372.23790	0.28240	3.01850	2.17390	HepG2	MSI2
COPB2	ENSG00000184432.5	3867.39990	4898.16190	-0.34090	2.53660	1.92850	HepG2	NCBP2
COPB2	ENSG00000184432.5	3987.08950	5850.99780	-0.55330	12.06220	10.51960	HepG2	NOL12
COPB2	ENSG00000184432.5	4346.21760	2904.17150	0.58150	3.39780	2.40790	HepG2	PABPC1
COPB2	ENSG00000184432.5	3942.86440	4453.53210	-0.17570	2.13280	1.58810	HepG2	PCBP1
COPB2	ENSG00000184432.5	2023.69250	2451.04060	-0.27640	2.81920	1.57810	HepG2	PKM
COPB2	ENSG00000184432.5	3083.79770	3989.17380	-0.37140	6.11410	5.05090	HepG2	PPIL4
COPB2	ENSG00000184432.5	3463.50770	4069.31130	-0.23260	3.22290	2.39370	HepG2	PRPF4
COPB2	ENSG00000184432.5	5284.64040	5929.08460	-0.16600	2.73290	2.14320	HepG2	PUM1
COPB2	ENSG00000184432.5	5431.88810	6581.77650	-0.27700	4.24800	3.64150	HepG2	RBM22
COPB2	ENSG00000184432.5	5610.40650	4454.20280	0.33280	3.35480	2.61770	HepG2	RBM25
COPB2	ENSG00000184432.5	4348.32950	5043.28960	-0.21390	2.99640	2.43770	HepG2	NELFE
COPB2	ENSG00000184432.5	3821.76150	4697.21600	-0.29760	5.38420	4.55980	HepG2	RECQL
COPB2	ENSG00000184432.5	4041.40990	6137.38580	-0.60280	10.35550	9.17830	HepG2	RPLP0
COPB2	ENSG00000184432.5	2107.40580	2883.92740	-0.45260	5.91430	5.05570	HepG2	RPS19
COPB2	ENSG00000184432.5	2629.46970	4314.71230	-0.71450	10.68370	8.61280	HepG2	RPS5
COPB2	ENSG00000184432.5	3951.18270	4983.20030	-0.33480	3.28960	2.52560	HepG2	SF3B1
COPB2	ENSG00000184432.5	4808.18140	5355.50200	-0.15550	2.28690	1.63920	HepG2	SLBP
COPB2	ENSG00000184432.5	3972.29200	4644.91700	-0.22570	4.68940	3.88840	HepG2	SMN1
COPB2	ENSG00000184432.5	6220.32830	7433.83340	-0.25710	5.31930	4.68660	HepG2	SRFBP1
COPB2	ENSG00000184432.5	7587.75350	4924.58610	0.62360	25.99680	24.86810	HepG2	SRSF1
COPB2	ENSG00000184432.5	4064.79500	5362.00920	-0.39960	2.90760	1.87660	HepG2	SRSF3
COPB2	ENSG00000184432.5	3831.04480	5514.71670	-0.52550	15.55670	14.24210	HepG2	SRSF5
COPB2	ENSG00000184432.5	4270.30610	5597.12150	-0.39030	9.31430	8.16760	HepG2	SRSF7
COPB2	ENSG00000184432.5	3417.69700	4006.44530	-0.22930	3.48520	2.88130	HepG2	SRSF9
COPB2	ENSG00000184432.5	7338.36210	6454.25580	0.18510	2.75200	2.23990	HepG2	SSB
COPB2	ENSG00000184432.5	1816.17480	2774.87730	-0.61150	5.27960	3.71650	HepG2	STIP1
COPB2	ENSG00000184432.5	5590.42200	6271.72370	-0.16590	2.68230	2.06760	HepG2	SUCLG1
COPB2	ENSG00000184432.5	3428.79530	4289.59210	-0.32310	2.00620	1.41650	HepG2	SUPV3L1
COPB2	ENSG00000184432.5	3716.21220	4426.51390	-0.25230	3.20780	2.61010	HepG2	TAF15
COPB2	ENSG00000184432.5	3883.98710	4907.25220	-0.33740	3.24870	2.46990	HepG2	TARDBP
COPB2	ENSG00000184432.5	2656.91770	4346.03840	-0.70990	17.19290	16.14040	HepG2	TIAL1
COPB2	ENSG00000184432.5	1799.23510	2534.10160	-0.49410	4.64830	3.66060	HepG2	UCHL5
COPB2	ENSG00000184432.5	2070.81470	4798.68290	-1.21240	74.15320	71.75850	HepG2	UTP3
COPB2	ENSG00000184432.5	2836.71390	4222.62830	-0.57390	6.44460	5.35290	HepG2	XRN2
COPB2	ENSG00000184432.5	3411.24480	4015.94960	-0.23540	4.29800	3.48990	HepG2	ZC3H8
COPB2	ENSG00000184432.5	6190.97780	5466.44100	0.17950	3.36430	2.77820	HepG2	ZNF622
COPB2	ENSG00000184432.5	12342.00230	10561.61600	0.22460	2.62610	1.73770	K562	ATP5C1
COPB2	ENSG00000184432.5	3998.59230	4644.93500	-0.21620	2.47620	1.57130	K562	BCLAF1
COPB2	ENSG00000184432.5	2094.14700	2580.06940	-0.30100	2.46660	1.48250	K562	CCAR1
COPB2	ENSG00000184432.5	2948.16030	3523.87450	-0.25730	3.17470	2.03230	K562	CSTF2
COPB2	ENSG00000184432.5	6918.36720	8168.46730	-0.23960	1.90700	1.34740	K562	DDX47
COPB2	ENSG00000184432.5	3803.88580	5124.15410	-0.42980	8.08950	6.73670	K562	EIF3G
COPB2	ENSG00000184432.5	4845.71660	6476.58830	-0.41850	2.62940	1.83010	K562	EIF4A3
COPB2	ENSG00000184432.5	7960.84390	10901.85030	-0.45360	12.16530	10.26960	K562	EIF4G2
COPB2	ENSG00000184432.5	6919.78690	5481.97610	0.33590	3.98420	2.04880	K562	FASTKD2
COPB2	ENSG00000184432.5	6666.73320	4530.11180	0.55730	10.99430	8.20420	K562	FUS
COPB2	ENSG00000184432.5	4536.45940	6735.41660	-0.57020	8.58460	7.58990	K562	FXR1
COPB2	ENSG00000184432.5	6110.18640	4407.65920	0.47110	6.53710	5.32090	K562	GPKOW
COPB2	ENSG00000184432.5	3732.14950	4709.93350	-0.33570	3.82590	3.13790	K562	HNRNPC
COPB2	ENSG00000184432.5	5325.15910	8190.15400	-0.62110	11.78200	9.96070	K562	MAGOH
COPB2	ENSG00000184432.5	6540.94750	8173.72230	-0.32150	3.80790	2.71100	K562	MATR3
COPB2	ENSG00000184432.5	6212.44370	6793.49770	-0.12900	2.26830	1.58670	K562	NSUN2
COPB2	ENSG00000184432.5	5447.32450	7287.42930	-0.41990	5.54070	4.14900	K562	PCBP2
COPB2	ENSG00000184432.5	5355.51120	7957.15740	-0.57120	10.96400	9.70450	K562	PTBP1
COPB2	ENSG00000184432.5	9819.27810	12396.00290	-0.33620	7.14200	5.57510	K562	PUM2
COPB2	ENSG00000184432.5	5557.00220	7630.62310	-0.45750	5.80380	4.52930	K562	RBM22
COPB2	ENSG00000184432.5	5842.35800	8029.85600	-0.45880	4.38760	2.97700	K562	NELFE
COPB2	ENSG00000184432.5	4591.35190	6391.40760	-0.47720	5.41220	3.94580	K562	RPS3
COPB2	ENSG00000184432.5	6198.14850	7571.97320	-0.28880	3.55420	2.58030	K562	SF3B4
COPB2	ENSG00000184432.5	5744.54760	7800.53170	-0.44140	6.91200	5.80230	K562	SRSF1
COPB2	ENSG00000184432.5	4565.76680	6170.41580	-0.43450	6.46170	4.73150	K562	SRSF4
COPB2	ENSG00000184432.5	6204.06990	7894.93890	-0.34770	3.29040	2.51740	K562	TARDBP
COPB2	ENSG00000184432.5	3070.56820	4061.74600	-0.40360	3.60860	2.53550	K562	TIAL1
COPB2	ENSG00000184432.5	7722.87870	6411.47500	0.26840	4.49760	2.87520	K562	TROVE2
COPB2	ENSG00000184432.5	8679.46870	7289.95730	0.25160	2.86250	2.04550	K562	U2AF2
COPB2	ENSG00000184432.5	4959.87220	4027.90030	0.30020	2.52460	1.55790	K562	UCHL5
COPB2	ENSG00000184432.5	9038.42780	7203.30670	0.32730	8.03690	6.89220	K562	UPF1
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for COPB2 is not available on ENCORE database.

21 RBPs can affect the splicing of COPB2 :

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	2ndExonStart	2ndExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
SE	COPB2	ENSG00000184432.5	chr3	-	139103845	139104042			139102139	139102277	139108389	139108512	-0.08500	0.00000	0.00001	excluded	K562	SRSF1
SE	COPB2	ENSG00000184432.5	chr3	-	139103845	139104042			139102139	139102277	139108389	139108512	0.17800	0.00000	0.00000	included	K562	SF3B4
SE	COPB2	ENSG00000184432.5	chr3	-	139092507	139092650			139092054	139092254	139093330	139093430	-0.13500	0.00000	0.00000	excluded	K562	SF3B4
SE	COPB2	ENSG00000184432.5	chr3	-	139103845	139104271			139102139	139102277	139108389	139108468	0.05200	0.00079	0.03154	included	K562	PRPF8
SE	COPB2	ENSG00000184432.5	chr3	-	139103845	139104042			139102139	139102277	139108389	139108512	-0.06900	0.00000	0.00000	excluded	HepG2	RBM22
SE	COPB2	ENSG00000184432.5	chr3	-	139103845	139104271			139102139	139102277	139108389	139108468	0.05700	0.00036	0.03668	included	K562	XRCC6
SE	COPB2	ENSG00000184432.5	chr3	-	139103845	139104042			139102139	139102277	139108389	139108512	0.19100	0.00000	0.00000	included	HepG2	ILF3
SE	COPB2	ENSG00000184432.5	chr3	-	139092507	139092650			139092054	139092254	139093330	139093430	-0.11100	0.00000	0.00000	excluded	K562	AQR
SE	COPB2	ENSG00000184432.5	chr3	-	139103845	139104271			139102139	139102277	139108389	139108468	0.06400	0.00046	0.02140	included	K562	FXR1
SE	COPB2	ENSG00000184432.5	chr3	-	139103845	139104042			139102139	139102277	139108389	139108512	-0.05600	0.00000	0.00001	excluded	HepG2	SRSF7
SE	COPB2	ENSG00000184432.5	chr3	-	139103845	139104042			139102139	139102277	139108389	139108512	0.10600	0.00000	0.00000	included	HepG2	DDX6
SE	COPB2	ENSG00000184432.5	chr3	-	139103845	139104271			139102139	139102277	139108389	139108468	-0.07300	0.00053	0.06023	excluded	HepG2	RBFOX2
SE	COPB2	ENSG00000184432.5	chr3	-	139103845	139104042			139102139	139102277	139108389	139108512	-0.07600	0.00001	0.00323	excluded	K562	EIF4G2
SE	COPB2	ENSG00000184432.5	chr3	-	139103845	139104042			139102139	139102277	139108389	139108512	-0.08600	0.00000	0.00002	excluded	K562	SRSF7
SE	COPB2	ENSG00000184432.5	chr3	-	139103845	139104042			139102139	139102277	139108389	139108512	0.10400	0.00000	0.00000	included	HepG2	SF3B4
SE	COPB2	ENSG00000184432.5	chr3	-	139103845	139104042			139102139	139102277	139108389	139108512	0.07500	0.00000	0.00041	included	HepG2	TAF15
SE	COPB2	ENSG00000184432.5	chr3	-	139103845	139104042			139102139	139102277	139108389	139108512	-0.09000	0.00000	0.00000	excluded	K562	HNRNPU
SE	COPB2	ENSG00000184432.5	chr3	-	139103845	139104271			139102139	139102277	139108389	139108468	0.05600	0.00072	0.02145	included	K562	AGGF1
SE	COPB2	ENSG00000184432.5	chr3	-	139103845	139104271			139102139	139102277	139108389	139108468	0.14300	0.00240	0.07836	included	K562	SF3B1
SE	COPB2	ENSG00000184432.5	chr3	-	139098613	139098749			139098221	139098308	139102139	139102277	0.08900	0.00036	0.01832	included	K562	SF3B1
SE	COPB2	ENSG00000184432.5	chr3	-	139092507	139092650			139092054	139092254	139093330	139093430	-0.05400	0.00000	0.00002	excluded	K562	SF3B1
SE	COPB2	ENSG00000184432.5	chr3	-	139103845	139104042			139102139	139102277	139108389	139108512	-0.09000	0.00000	0.00000	excluded	K562	HNRNPK
SE	COPB2	ENSG00000184432.5	chr3	-	139103845	139104271			139102139	139102277	139108389	139108468	0.06800	0.00003	0.01358	included	K562	SERBP1
SE	COPB2	ENSG00000184432.5	chr3	-	139092507	139092650			139092054	139092254	139093330	139093430	-0.05400	0.00001	0.00590	excluded	K562	SERBP1
SE	COPB2	ENSG00000184432.5	chr3	-	139092507	139092650			139092054	139092254	139093330	139093430	-0.06500	0.00000	0.00000	excluded	K562	HNRNPC
A3SS	COPB2	ENSG00000184432.5	chr3	-	139078111	139078309			139078111	139078204	139079922	139080168	0.09000	0.00000	0.00000	longer	K562	AQR
A3SS	COPB2	ENSG00000184432.5	chr3	-	139086986	139087218			139086986	139087130	139088102	139088209	0.14700	0.00000	0.00000	longer	K562	AQR
A3SS	COPB2	ENSG00000184432.5	chr3	-	139092582	139092793			139092582	139092675	139093330	139093430	-0.38800	0.01744	0.08491	shorter	K562	AQR
RI	COPB2	ENSG00000184432.5	chr3	-	139093081	139093430			139093081	139093243	139093330	139093430	-0.07900	0.00094	0.05666	excluded	K562	PPIL4
RI	COPB2	ENSG00000184432.5	chr3	-	139093081	139093430			139093081	139093243	139093330	139093430	-0.33200	0.00000	0.00000	excluded	HepG2	U2AF2
MXE	COPB2	ENSG00000184432.5	chr3	-	139092054	139092254	139092582	139092650	139090564	139090675	139093330	139093430	-0.10600	0.00064	0.00619	2included	K562	AQR

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

COPB2

General Information

Functions

Localization

Domains (AlphaFold: COPB2)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for COPB2 is not avaliable on ENCORE database.

38 proteins are bound to COPB2 RNA:

eCLIP assay for COPB2 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for COPB2 is not available on ENCORE database.

81 RBPs can affect the gene expression of COPB2 :

The Knockdown/knockout RNA-Seq assay for COPB2 is not available on ENCORE database.

21 RBPs can affect the splicing of COPB2 :

The Knockdown/knockout RNA-Seq assay for COPB2 is not avaliable on ENCORE database.