CNST

General Information

Gene Name       : CNST
Gene ID             : ENSG00000162852.13
Essential Gene : No

Functions

Localization

Domains (AlphaFold: CNST)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878CNSTENSG00000162852.139.978.269.12ENCSR000AEF
HepG2CNSTENSG00000162852.135.116.215.66ENCSR985KAT
K562CNSTENSG00000162852.1321.7120.7421.23ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for CNST is not avaliable on ENCORE database.



Proteins bound to RNA
  • CNST RNA is bound by 25 proteins.  







eCLIP assay for CNST is not avaliable on ENCORE database.





25 proteins are bound to CNST RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr1246829269246829317+3'-UTR3.466114.53005K562YBX3
chr1246829736246829802+3'-UTR3.379234.17049K562TARDBP
chr1246754854246754953+5'-UTR,CDS3.956803.88696K562GRWD1
chr1246805288246805339+CDS3.076134.00731K562UCHL5
chr1246810886246810954+CDS4.8594821.10281K562RBM15
chr1246784927246785012+CDS,intron-Distal,intron-Proximal3.203148.04989K562PRPF8
chr1246784752246784858+CDS,intron-Distal4.033764.23295HepG2GRWD1
chr1246797854246797893+CDS,intron-Proximal3.890887.65528K562ZNF622
chr1246795185246795229+CDS,intron-Proximal3.776723.76397K562SF3B4
chr1246810689246810764+CDS3.3972010.22929K562RBM15
chr1246797287246797368+CDS,intron-Proximal3.745488.61602K562AQR
chr1246755143246755237+CDS4.480269.19326K562ZNF622
chr1246754945246755054+CDS3.389983.36903K562MTPAP
chr1246810870246810933+CDS3.330784.74241K562YBX3
chr1246755114246755194+CDS3.051115.41277K562UCHL5
chr1246755136246755179+CDS4.767636.59918K562RBM15
chr1246805208246805288+CDS,intron-Proximal3.331157.70481K562AQR
chr1246823525246823607+CDS3.666213.29600K562LIN28B
chr1246810478246810579+CDS3.125316.77366K562YBX3
chr1246805044246805128+CDS,intron-Proximal4.123637.30031K562AQR
chr1246805039246805088+CDS,intron-Proximal3.769577.22344K562U2AF2
chr1246805229246805281+CDS,intron-Proximal4.016614.79983HepG2U2AF2
chr1246754953246755070+CDS3.366235.80673K562GRWD1
chr1246755080246755135+CDS3.181614.29172K562YBX3
chr1246810876246810955+CDS3.128376.50677K562UCHL5
chr1246784934246784997+CDS,intron-Distal,intron-Proximal4.699636.99120K562AQR
chr1246795191246795269+CDS,intron-Proximal3.998104.49024K562AQR
chr1246795188246795250+CDS,intron-Proximal4.499143.45799HepG2U2AF2
chr1246755070246755220+CDS4.558876.22426K562GRWD1
chr1246805039246805083+CDS,intron-Proximal4.952037.22462K562U2AF1
chr1246800501246800557+intron-Distal4.274893.62366HepG2HNRNPM
chr1246800033246800100+intron-Distal4.900326.73640K562EXOSC5
chr1246767722246767798+intron-Distal5.6866814.91517K562CSTF2T
chr1246814703246814782+intron-Distal3.197655.96357K562PTBP1
chr1246776957246777067+intron-Distal5.0716411.26688HepG2PCBP2
chr1246778132246778208+intron-Distal4.529355.97952K562ILF3
chr1246801447246801503+intron-Distal3.606677.26545K562EXOSC5
chr1246806133246806217+intron-Distal4.796227.20766K562TARDBP
chr1246776960246777068+intron-Distal6.2898822.33509K562ILF3
chr1246800994246801122+intron-Distal3.552635.14628K562TARDBP
chr1246801688246801753+intron-Distal5.3017510.28698K562HNRNPM
chr1246800269246800373+intron-Distal4.111319.08614K562EXOSC5
chr1246801000246801077+intron-Distal4.627165.02084HepG2HNRNPM
chr1246742231246742330+intron-Distal4.109103.26999K562KHSRP
chr1246776976246777064+intron-Distal3.077713.25653K562CSTF2T
chr1246767713246767795+intron-Distal6.313469.49599K562FMR1
chr1246800604246800625+intron-Distal3.346053.72952K562EXOSC5
chr1246797889246798001+intron-Distal,intron-Proximal4.459325.68841K562KHSRP
chr1246813670246813738+intron-Distal4.245034.30850HepG2QKI
chr1246767708246767785+intron-Distal4.419564.86595HepG2CSTF2
chr1246801701246801744+intron-Distal3.079153.11000HepG2HNRNPM
chr1246813807246813880+intron-Distal5.233566.36700K562QKI
chr1246801035246801116+intron-Distal4.5554514.87981K562EXOSC5
chr1246800406246800453+intron-Distal5.151776.41304K562EXOSC5
chr1246800239246800355+intron-Distal3.987193.00997K562TAF15
chr1246801004246801082+intron-Distal5.277078.41046K562HNRNPM
chr1246800277246800377+intron-Distal4.068328.29314K562HNRNPM
chr1246800474246800550+intron-Distal3.862446.25647K562HNRNPM
chr1246785359246785409+intron-Distal4.214494.24447K562FMR1
chr1246793665246793799+intron-Distal3.761723.37923K562KHDRBS1
chr1246755316246755393+intron-Distal,intron-Proximal4.622548.19380K562FMR1
chr1246805095246805151+intron-Proximal3.214913.07751K562KHSRP
chr1246795138246795185+intron-Proximal5.063166.40247K562SF3B4
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for CNST is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for CNST is not available on ENCORE database.

  • 92 RBPs can affect the levels of CNST.  








The Knockdown/knockout RNA-Seq assay for CNST is not available on ENCORE database.





92 RBPs can affect the gene expression of CNST :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
CNSTENSG00000162852.9367.79090452.93840-0.300401.879601.36040HepG2ACO1
CNSTENSG00000162852.9818.84130660.365900.310202.589101.92210HepG2AUH
CNSTENSG00000162852.9637.26300384.389300.729206.821605.93030HepG2BOP1
CNSTENSG00000162852.9540.93050423.905900.351602.141501.45730HepG2CALR
CNSTENSG00000162852.9584.82980452.804300.369003.191002.48630HepG2CKAP4
CNSTENSG00000162852.9711.68790476.991600.577202.909102.12470HepG2CNOT7
CNSTENSG00000162852.9229.70330382.11720-0.734206.300404.76380HepG2YBX3
CNSTENSG00000162852.91059.72530754.995500.489103.638002.93120HepG2DDX3X
CNSTENSG00000162852.9551.90610433.330100.348902.440401.79760HepG2DKC1
CNSTENSG00000162852.9270.10680371.88680-0.461303.423302.71180HepG2DNAJC2
CNSTENSG00000162852.9409.01820623.47190-0.608204.330203.59800HepG2EIF2S1
CNSTENSG00000162852.9467.92470302.393600.629704.238903.13700HepG2EIF3D
CNSTENSG00000162852.9782.55520594.646400.396103.573702.64200HepG2EIF4G1
CNSTENSG00000162852.91080.00840758.224100.510206.939306.06020HepG2ETF1
CNSTENSG00000162852.9258.75560407.64110-0.655704.751703.31440HepG2FASTKD2
CNSTENSG00000162852.9574.13940353.498700.699602.384501.44790HepG2FTO
CNSTENSG00000162852.9493.87740695.22670-0.493303.293802.54200HepG2FXR1
CNSTENSG00000162852.9508.45100684.67890-0.429302.663001.79050HepG2G3BP2
CNSTENSG00000162852.9649.50690400.016100.699205.264604.40010HepG2GPKOW
CNSTENSG00000162852.9257.11960421.36470-0.712604.976104.06600HepG2HNRNPC
CNSTENSG00000162852.9501.11170653.09130-0.382202.228501.59650HepG2HNRNPK
CNSTENSG00000162852.9611.90270381.743500.680605.356704.51060HepG2HNRNPLL
CNSTENSG00000162852.9519.09150405.686300.355502.182001.53490HepG2IGF2BP1
CNSTENSG00000162852.9321.38160427.56720-0.411903.321302.52400HepG2ILF2
CNSTENSG00000162852.9418.82200665.14840-0.667308.559307.58900HepG2PCBP1
CNSTENSG00000162852.9264.44100373.34160-0.497603.389702.58120HepG2PPIL4
CNSTENSG00000162852.9569.97250379.315700.587406.108705.00920HepG2PRPF4
CNSTENSG00000162852.9389.72230282.496000.464102.751001.94480HepG2PRPF8
CNSTENSG00000162852.9589.23670461.341900.352902.896202.26960HepG2PUS1
CNSTENSG00000162852.9886.63590733.007100.274401.910501.37630HepG2QKI
CNSTENSG00000162852.9828.17300633.727600.386003.296602.74470HepG2RBM22
CNSTENSG00000162852.9893.08550443.822901.0087013.8596012.54850HepG2RPLP0
CNSTENSG00000162852.9699.27610434.370900.686804.167003.01350HepG2RPS10
CNSTENSG00000162852.9538.50180404.427700.413002.029201.33720HepG2RPS2
CNSTENSG00000162852.9469.81830279.465800.749305.629404.54430HepG2RRP9
CNSTENSG00000162852.9219.04100372.77020-0.767107.248706.27670HepG2SAFB2
CNSTENSG00000162852.9808.96480558.154900.535303.175602.45210HepG2SF3A3
CNSTENSG00000162852.9651.81860420.421300.632503.338602.47560HepG2SNRNP70
CNSTENSG00000162852.91244.13040715.758800.7975017.4189016.44660HepG2SRFBP1
CNSTENSG00000162852.9674.61000406.577700.730405.028203.64140HepG2SRSF3
CNSTENSG00000162852.9972.86170621.425100.6466010.634309.75600HepG2SSB
CNSTENSG00000162852.9539.65160364.358600.566603.952803.16710HepG2SUPV3L1
CNSTENSG00000162852.9526.47740406.769400.372102.358401.88990HepG2TIAL1
CNSTENSG00000162852.9600.27810420.171900.514603.497102.79600HepG2U2AF1
CNSTENSG00000162852.91664.899802407.51050-0.532106.708505.85910K562AQR
CNSTENSG00000162852.91184.124501528.47610-0.368304.500102.76330K562BCCIP
CNSTENSG00000162852.91228.659601477.02550-0.265602.900701.91930K562BCLAF1
CNSTENSG00000162852.91434.361002018.15540-0.492606.733104.87860K562CCDC124
CNSTENSG00000162852.9943.393901223.99820-0.375703.440302.56330K562CPSF6
CNSTENSG00000162852.9850.065401120.54390-0.398604.057602.74550K562CSTF2
CNSTENSG00000162852.91288.972001668.11420-0.372004.490602.92370K562DDX21
CNSTENSG00000162852.92046.083402403.49450-0.232302.777602.12520K562DDX47
CNSTENSG00000162852.9964.913501328.77290-0.461606.281805.09970K562EIF3G
CNSTENSG00000162852.91652.143201361.940600.278602.817501.64800K562EIF4B
CNSTENSG00000162852.91204.009601598.81470-0.409203.723102.72880K562FIP1L1
CNSTENSG00000162852.9813.643301055.51590-0.375502.548701.67380K562FTO
CNSTENSG00000162852.9906.437001168.63760-0.366502.899002.08620K562GPKOW
CNSTENSG00000162852.91629.921002465.18380-0.596908.846307.47520K562GRSF1
CNSTENSG00000162852.91101.908601887.41510-0.7764014.3134012.17410K562HNRNPA1
CNSTENSG00000162852.9486.375501308.35820-1.4276030.6131028.70090K562HNRNPC
CNSTENSG00000162852.9793.999501168.21450-0.557103.990902.58850K562HNRNPF
CNSTENSG00000162852.92653.963301930.862600.458804.386202.79760K562HNRNPK
CNSTENSG00000162852.91519.432102090.10400-0.460007.129005.69410K562HNRNPU
CNSTENSG00000162852.91489.042102167.56390-0.541706.250005.06480K562HSPD1
CNSTENSG00000162852.91479.684701933.04700-0.385602.578401.59910K562IGF2BP2
CNSTENSG00000162852.9707.73920997.81690-0.495602.953001.98450K562KRR1
CNSTENSG00000162852.91447.054902027.63810-0.486706.305204.83100K562MATR3
CNSTENSG00000162852.9923.146101140.71200-0.305302.297201.50100K562METAP2
CNSTENSG00000162852.91452.377401828.90230-0.332604.749603.71310K562MTPAP
CNSTENSG00000162852.92144.739901464.313200.550502.354301.55590K562NAA15
CNSTENSG00000162852.91384.592002032.02820-0.5535015.9911014.40330K562NSUN2
CNSTENSG00000162852.9979.641301592.21050-0.700707.753106.35820K562PCBP3
CNSTENSG00000162852.9820.435201221.27310-0.573907.099705.82910K562POLR2G
CNSTENSG00000162852.9888.387701173.03810-0.401003.357602.34730K562PSIP1
CNSTENSG00000162852.91503.192101973.94260-0.393104.455603.63350K562PTBP1
CNSTENSG00000162852.92653.317303521.21460-0.408304.745803.68020K562PUF60
CNSTENSG00000162852.93080.442603669.72570-0.252502.907201.92390K562PUM2
CNSTENSG00000162852.92064.732001697.980800.282003.025102.40970K562RBM15
CNSTENSG00000162852.9745.308001070.04290-0.521805.681704.25420K562RCC2
CNSTENSG00000162852.92685.119101991.922200.430704.087302.72790K562NELFE
CNSTENSG00000162852.9757.531401320.84350-0.802108.511507.06390K562RPS19
CNSTENSG00000162852.91218.062901824.30380-0.582805.276902.81550K562SAFB2
CNSTENSG00000162852.91422.563002094.38220-0.558003.316001.63180K562SBDS
CNSTENSG00000162852.9733.990301111.34100-0.598505.079703.74020K562SF3B1
CNSTENSG00000162852.91830.543101543.560000.245902.232001.46600K562SF3B4
CNSTENSG00000162852.9561.74880740.15930-0.397902.765801.50040K562SLBP
CNSTENSG00000162852.9772.500101014.39300-0.393003.035201.95020K562SRFBP1
CNSTENSG00000162852.9974.129701294.77380-0.410503.307701.48970K562SRP68
CNSTENSG00000162852.91565.085001935.10210-0.306202.809102.09790K562SRSF1
CNSTENSG00000162852.91127.921001488.50940-0.400205.062203.46410K562SRSF7
CNSTENSG00000162852.9925.033401255.52260-0.440703.106002.02890K562SUPV3L1
CNSTENSG00000162852.91574.512901224.977900.362003.782802.82110K562SYNCRIP
CNSTENSG00000162852.91530.429201958.49230-0.355802.882702.16150K562TARDBP
CNSTENSG00000162852.9645.028701128.29110-0.806709.031307.26930K562TIAL1
CNSTENSG00000162852.9946.441901198.43740-0.340602.532201.63370K562TRIM56
CNSTENSG00000162852.91771.032402128.24320-0.265103.298001.90380K562TROVE2
CNSTENSG00000162852.91445.137301843.62250-0.351303.481002.50140K562WDR3
CNSTENSG00000162852.91355.896001917.19480-0.4998010.879409.33400K562WDR43
CNSTENSG00000162852.9964.139301353.02700-0.488904.251402.63820K562XRN2
CNSTENSG00000162852.92225.411302712.12570-0.285402.429101.62890K562ZC3H8
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for CNST is not available on ENCORE database.





6 RBPs can affect the splicing of CNST :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SECNSTENSG00000162852.9chr1+246784730246784936246754813246755243246795195246795226-0.124000.002310.04080excludedK562SF3B4
SECNSTENSG00000162852.9chr1+2467815592467817032467548132467552432467847302467849360.066000.000010.00378includedK562MATR3
SECNSTENSG00000162852.9chr1+246805050246805072246797774246797889246810440246811545-0.342000.000000.00000excludedK562TARDBP
A3SSCNSTENSG00000162852.9chr1+2468234802468236362468235002468236362468104402468113390.070000.000400.00309longerK562AQR
RICNSTENSG00000162852.9chr1+2467972252467978892467972252467973122467977742467978890.096000.000000.00000includedK562PUS1
MXECNSTENSG00000162852.9chr1+2467548132467552432467847302467849362467297452467299652467951952467952260.238000.000190.009211includedK562EFTUD2

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for CNST is not avaliable on ENCORE database.