RBP | Antibody Info | Primary-HepG2 | Secondary-HepG2 | Primary-K562 | Secondary-K562 | Primary-UBERON | Primary-Hela |
---|
Chr | Start | End | Strand | Matched Area | log2(fold change) | -log(p-value) | Cell Line | Binding Protein Name |
---|---|---|---|---|---|---|---|---|
chr6 | 42897341 | 42897419 | + | CDS | 4.07494 | 71.33527 | HepG2 | DDX3X |
chr6 | 42897220 | 42897317 | + | 5'-UTR,CDS | 5.69227 | 60.55041 | HepG2 | DDX3X |
chr6 | 42906730 | 42906814 | + | 3'-UTR | 5.20349 | 26.95933 | HepG2 | PCBP2 |
chr6 | 42906721 | 42906894 | + | 3'-UTR | 5.23279 | 25.68369 | HepG2 | AKAP1 |
chr6 | 42906715 | 42906794 | + | 3'-UTR | 4.32109 | 18.85908 | HepG2 | UPF1 |
chr6 | 42906715 | 42906782 | + | 3'-UTR | 3.32310 | 15.51606 | HepG2 | LARP4 |
chr6 | 42906351 | 42906416 | + | 3'-UTR,CDS | 5.04033 | 15.38904 | HepG2 | UPF1 |
chr6 | 42905485 | 42905570 | + | 3'-UTR,CDS | 4.75895 | 14.10758 | HepG2 | LIN28B |
chr6 | 42897336 | 42897414 | + | CDS | 3.19373 | 13.85189 | HepG2 | UPF1 |
chr6 | 42905454 | 42905568 | + | 3'-UTR,CDS,intron-Proximal | 5.47283 | 12.97306 | K562 | LIN28B |
Chr | Start | End | Strand | Matched Area | log2(fold change) | -log(p-value) | Cell Line | Binding Protein Name |
Gene Name | Gene ID | KDMean | CNMean | log2(fold change) * | -log(pval) ** | -log(padj) ** | Cell Line | Affected by RBP | Bound by RBP |
---|---|---|---|---|---|---|---|---|---|
CNPY3 | ENSG00000137161.12 | 590.00530 | 1387.07120 | -1.23320 | 47.92110 | 46.37110 | HepG2 | ZNF622 | |
CNPY3 | ENSG00000137161.12 | 641.79990 | 1609.32260 | -1.32630 | 38.38060 | 36.58040 | HepG2 | PCBP1 | |
CNPY3 | ENSG00000137161.12 | 766.08550 | 1779.54690 | -1.21590 | 33.08870 | 31.85070 | HepG2 | SRSF1 | |
CNPY3 | ENSG00000137161.12 | 3292.68400 | 1517.14040 | 1.11780 | 30.66900 | 28.97220 | HepG2 | PUF60 | |
CNPY3 | ENSG00000137161.12 | 1125.67250 | 1914.74890 | -0.76640 | 22.61330 | 21.54010 | HepG2 | SRFBP1 | |
CNPY3 | ENSG00000137161.12 | 698.80100 | 1535.79670 | -1.13600 | 20.56030 | 18.81790 | HepG2 | HNRNPK | |
CNPY3 | ENSG00000137161.12 | 1007.99430 | 1704.95130 | -0.75820 | 18.82290 | 17.49690 | HepG2 | SF3B4 | |
CNPY3 | ENSG00000137161.12 | 975.69120 | 1637.47330 | -0.74700 | 18.01880 | 16.85230 | HepG2 | PTBP1 | |
CNPY3 | ENSG00000137161.12 | 691.80280 | 1217.63160 | -0.81560 | 17.40890 | 16.09670 | HepG2 | UTP3 | |
CNPY3 | ENSG00000137161.12 | 533.99740 | 1086.66830 | -1.02500 | 16.01980 | 13.39620 | HepG2 | DDX47 | |
Gene Name | Gene ID | KDMean | CNMean | log2(fold change) | -log(pval) | -log(padj) | Cell Line | Affected by RBP | Bound by RBP |
*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".
Event Type | Gene Name | Gene ID | chr | Strand | ExonStart | ExonEnd | 2ndExonStart | 2ndExonEnd | upstreamES | upstreamEE | downstreamES | downstreamEE | dPSI | p-value | FDR | is_included | Cell Line | Affected by RBP | Bound by RBP |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
SE | CNPY3 | ENSG00000137161.12 | chr6 | + | 42903149 | 42903211 | 42902212 | 42902336 | 42903311 | 42903408 | -0.12500 | 0.00000 | 0.00013 | excluded | K562 | AKAP8L | |||
SE | CNPY3 | ENSG00000137161.12 | chr6 | + | 42903149 | 42903211 | 42902212 | 42902336 | 42903311 | 42903408 | 0.19200 | 0.00000 | 0.00000 | included | HepG2 | HNRNPK | |||
SE | CNPY3 | ENSG00000137161.12 | chr6 | + | 42903149 | 42903211 | 42902115 | 42902336 | 42903311 | 42903408 | -0.06600 | 0.00000 | 0.00000 | excluded | HepG2 | DDX59 | |||
SE | CNPY3 | ENSG00000137161.12 | chr6 | + | 42903149 | 42903211 | 42902212 | 42902336 | 42903311 | 42903408 | -0.05200 | 0.00000 | 0.00001 | excluded | HepG2 | U2AF2 | |||
SE | CNPY3 | ENSG00000137161.12 | chr6 | + | 42905454 | 42905577 | 42903311 | 42903408 | 42905827 | 42905945 | -0.06700 | 0.00000 | 0.00000 | excluded | HepG2 | U2AF2 | |||
SE | CNPY3 | ENSG00000137161.12 | chr6 | + | 42903149 | 42903211 | 42902212 | 42902336 | 42903311 | 42903408 | 0.06900 | 0.00000 | 0.00221 | included | HepG2 | RBM15 | |||
SE | CNPY3 | ENSG00000137161.12 | chr6 | + | 42902212 | 42902336 | 42896937 | 42897459 | 42903311 | 42903408 | -0.16300 | 0.00000 | 0.00004 | excluded | HepG2 | SRSF1 | |||
SE | CNPY3 | ENSG00000137161.12 | chr6 | + | 42903149 | 42903211 | 42902212 | 42902336 | 42903311 | 42903408 | 0.16800 | 0.00000 | 0.00001 | included | HepG2 | PCBP1 | |||
SE | CNPY3 | ENSG00000137161.12 | chr6 | + | 42903149 | 42903211 | 42902115 | 42902336 | 42903311 | 42903408 | -0.11800 | 0.00000 | 0.00011 | excluded | K562 | RBM15 | |||
SE | CNPY3 | ENSG00000137161.12 | chr6 | + | 42903149 | 42903211 | 42902212 | 42902336 | 42903311 | 42903408 | 0.13100 | 0.00001 | 0.00528 | included | K562 | UPF1 |
*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".