C16orf70

General Information

Gene Name       : C16orf70
Gene ID             : ENSG00000125149.11
Essential Gene : No

Functions

Localization

Domains (AlphaFold: C16orf70)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878C16orf70ENSG00000125149.116.669.588.12ENCSR000AEF
HepG2C16orf70ENSG00000125149.1169.8553.1861.52ENCSR985KAT
K562C16orf70ENSG00000125149.1110.7513.1511.95ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for C16orf70 is not avaliable on ENCORE database.



Proteins bound to RNA
  • C16orf70 RNA is bound by 34 proteins.  







eCLIP assay for C16orf70 is not avaliable on ENCORE database.





34 proteins are bound to C16orf70 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr166718223967182294+3'-UTR3.933056.43352HepG2PABPN1
chr166718114167181230+3'-UTR,CDS,intron-Proximal4.979545.93974HepG2UPF1
chr166718209867182208+3'-UTR3.8307210.90448HepG2ZC3H11A
chr166718178767181899+3'-UTR5.5543012.35287HepG2PABPN1
chr166718212167182202+3'-UTR3.163124.39148HepG2PABPN1
chr166718178067181881+3'-UTR4.534068.49053HepG2AKAP1
chr166718201967182074+3'-UTR5.959019.17142K562PUM2
chr166718202467182205+3'-UTR3.8837722.64822HepG2FUBP3
chr166718179567181872+3'-UTR4.473928.73365HepG2UPF1
chr166718209467182195+3'-UTR5.4301341.72154K562PUM2
chr166718109767181234+3'-UTR,CDS,intron-Distal,intron-Proximal3.782883.66457HepG2IGF2BP3
chr166718137567181440+3'-UTR,CDS3.463693.73678HepG2UPF1
chr166718224767182308+3'-UTR3.761209.01013HepG2DDX55
chr166718115167181221+3'-UTR,CDS,intron-Proximal3.524354.27313HepG2PABPN1
chr166718156867181607+3'-UTR4.015323.87385HepG2AKAP1
chr166718211467182200+3'-UTR4.6135817.28754HepG2DDX55
chr166718236967182418+3'-UTR4.943217.65809K562PABPC4
chr166714394867144053+5'-UTR,intron-Proximal5.7796811.77419HepG2AQR
chr166714396167144021+5'-UTR,intron-Proximal4.5429315.66089HepG2SF3B4
chr166714400167144061+5'-UTR,intron-Proximal4.458808.31500HepG2PRPF8
chr166714401767144082+5'-UTR,CDS,intron-Proximal3.372463.67794HepG2DDX3X
chr166714388067143954+5'-UTR,intron-Proximal3.633025.90285HepG2PRPF8
chr166714387267143975+5'-UTR,intron-Proximal5.0346513.59775HepG2NCBP2
chr166714391367143961+5'-UTR,intron-Proximal3.729083.84691HepG2SF3B4
chr166714398467144133+5'-UTR,CDS,intron-Proximal4.1599214.43945HepG2NCBP2
chr166718023367180299+CDS,intron-Proximal4.138839.68077HepG2PRPF8
chr166717381767173917+CDS,intron-Proximal4.227755.16342K562SF3B4
chr166717388567173941+CDS,intron-Proximal5.2983216.55152HepG2PPIG
chr166716642367166468+CDS,intron-Proximal3.391265.76243HepG2BUD13
chr166718094667180966+CDS,intron-Proximal3.758645.52342HepG2PPIG
chr166716801267168153+CDS,intron-Proximal3.1577619.64708HepG2BUD13
chr166716675767166818+CDS,intron-Proximal3.731426.51082HepG2PPIG
chr166716836367168372+CDS,intron-Proximal3.110918.52439HepG2PPIG
chr166714408267144142+CDS3.917513.76880HepG2DDX3X
chr166716813267168181+CDS,intron-Proximal5.5785010.43516HepG2PRPF8
chr166716835667168446+CDS,intron-Proximal5.014697.46464K562PRPF8
chr166716806767168127+CDS,intron-Proximal3.077367.22938HepG2PPIG
chr166715988767159935+CDS,intron-Distal3.911556.20582HepG2PRPF8
chr166716831067168363+CDS3.0028910.16782HepG2PPIG
chr166716805667168139+CDS,intron-Proximal3.263716.60938HepG2AQR
chr166717819567178225+CDS,intron-Proximal3.258594.47973K562YBX3
chr166716641967166486+CDS,intron-Proximal3.834436.22597HepG2EFTUD2
chr166717952467179604+CDS,intron-Proximal4.998105.17615K562AQR
chr166718095167181014+CDS,intron-Proximal3.490794.51483HepG2PABPN1
chr166716816067168303+CDS,intron-Proximal3.969394.23459K562PRPF8
chr166717947467179531+CDS3.022223.09811HepG2GRWD1
chr166716812767168169+CDS,intron-Proximal3.559668.43905HepG2PPIG
chr166717926367179324+CDS,intron-Proximal3.8782310.01959HepG2PRPF8
chr166716640867166480+CDS,intron-Proximal3.9534415.19376HepG2PRPF8
chr166717396467174001+CDS3.771414.13746HepG2PPIG
chr166717447067174522+CDS,intron-Proximal3.658093.40928HepG2UCHL5
chr166717447367174498+CDS,intron-Proximal3.200854.31744K562YBX3
chr166716680667166886+CDS,intron-Proximal5.067436.03362HepG2AQR
chr166717872367178795+CDS,intron-Proximal3.3443813.72658HepG2EFTUD2
chr166716823767168294+CDS,intron-Proximal4.273998.69552HepG2PRPF8
chr166716514567165195+CDS,intron-Proximal4.113777.26932HepG2BUD13
chr166716825767168268+CDS,intron-Proximal3.627124.68902HepG2PPIG
chr166718020167180254+CDS,intron-Proximal3.269107.17118HepG2PPIG
chr166717387367173934+CDS,intron-Proximal3.095468.26020HepG2U2AF2
chr166716678867166856+CDS,intron-Proximal4.1941313.02279HepG2PRPF8
chr166717447467174520+CDS,intron-Proximal3.998934.58579HepG2TIA1
chr166717442467174472+CDS3.381334.48818HepG2GRWD1
chr166717827567178345+CDS,intron-Proximal5.8227026.77714HepG2PRPF8
chr166717952467179572+CDS,intron-Proximal3.863645.99700HepG2AQR
chr166717827867178285+CDS,intron-Proximal4.465679.90527HepG2AQR
chr166716832967168420+CDS,intron-Proximal4.3546118.42957HepG2PRPF8
chr166718024867180289+CDS,intron-Proximal3.785724.90219HepG2AQR
chr166716031967160365+intron-Distal3.471623.35585HepG2QKI
chr166715959767159659+intron-Distal3.968643.47425HepG2U2AF1
chr166716042767160472+intron-Distal3.207586.91567HepG2QKI
chr166716795367168001+intron-Distal,intron-Proximal4.280314.60713HepG2XPO5
chr166716906367169116+intron-Distal,intron-Proximal3.914155.20418HepG2HNRNPC
chr166715958667159662+intron-Distal5.8224822.45026HepG2U2AF2
chr166715172367151781+intron-Distal3.649113.18711HepG2ILF3
chr166717802467178132+intron-Distal,intron-Proximal3.583539.67886HepG2GRWD1
chr166714540267145455+intron-Distal4.127163.62366HepG2HNRNPM
chr166717326767173318+intron-Distal3.767026.73249HepG2HNRNPC
chr166716691767166979+intron-Distal4.020319.23722HepG2CDC40
chr166716857467168593+intron-Distal4.474705.18660HepG2PPIG
chr166715996967160010+intron-Distal,intron-Proximal3.568045.43815HepG2PRPF8
chr166716039867160427+intron-Distal5.4617510.79727HepG2QKI
chr166716683467166930+intron-Distal,intron-Proximal4.245663.49003K562PRPF8
chr166717801167178116+intron-Distal,intron-Proximal4.1449812.82496HepG2BCLAF1
chr166716036567160398+intron-Distal5.153608.20307HepG2QKI
chr166715941267159470+intron-Distal4.487833.37054HepG2XPO5
chr166717802367178074+intron-Distal3.474708.43905HepG2PPIG
chr166717802467178106+intron-Distal,intron-Proximal3.063263.30791HepG2SRSF9
chr166717418867174223+intron-Distal4.201343.35169HepG2U2AF2
chr166717731867177409+intron-Distal3.940955.31375HepG2ILF3
chr166717890967178957+intron-Distal5.967839.61799HepG2EFTUD2
chr166717245267172473+intron-Distal3.9942111.47616HepG2HNRNPC
chr166717829767178346+intron-Proximal6.1269211.09551HepG2EFTUD2
chr166717379767173859+intron-Proximal3.356843.98726HepG2RBFOX2
chr166717384967173882+intron-Proximal4.062214.09623HepG2SF3B4
chr166717452967174583+intron-Proximal4.853189.20986HepG2TIA1
chr166716642867166508+intron-Proximal5.7119210.48996K562AQR
chr166717816567178197+intron-Proximal5.4347511.28995HepG2RBM5
chr166716818867168237+intron-Proximal4.008299.97647HepG2PRPF8
chr166717827967178283+intron-Proximal3.874884.98250K562AQR
chr166717865067178730+intron-Proximal5.135774.83371K562EFTUD2
chr166717828367178328+intron-Proximal4.585048.69247K562AQR
chr166715412067154175+intron-Proximal4.587316.04020HepG2TIAL1
chr166718012867180175+intron-Proximal4.507495.80027HepG2SF3B4
chr166717380167173849+intron-Proximal5.5222720.03171HepG2SF3B4
chr166716799567168046+intron-Proximal4.522074.95965HepG2RBM5
chr166717878967178830+intron-Proximal3.548066.55814HepG2PRPF8
chr166717866967178727+intron-Proximal4.248424.32536HepG2SF3B4
chr166717813067178165+intron-Proximal4.4553715.00776HepG2RBM5
chr166717865467178723+intron-Proximal4.3368818.03900HepG2EFTUD2
chr166717828567178316+intron-Proximal5.4408910.32702HepG2AQR
chr166717812867178196+intron-Proximal4.383743.56713HepG2SF3B4
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for C16orf70 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for C16orf70 is not available on ENCORE database.

  • 94 RBPs can affect the levels of C16orf70.  








The Knockdown/knockout RNA-Seq assay for C16orf70 is not available on ENCORE database.





94 RBPs can affect the gene expression of C16orf70 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
C16orf70ENSG00000125149.72040.617602698.93740-0.403403.324502.29520HepG2ABCF1
C16orf70ENSG00000125149.71080.947102188.02600-1.0173036.1440034.55510HepG2ACO1
C16orf70ENSG00000125149.7882.550003265.66830-1.8876046.0279044.25380HepG2AKAP1
C16orf70ENSG00000125149.73731.061202702.020200.465404.581603.58350HepG2ASCC1
C16orf70ENSG00000125149.73568.402903079.182600.212602.615601.94610HepG2AUH
C16orf70ENSG00000125149.72555.113301676.812600.607608.500907.52130HepG2BOP1
C16orf70ENSG00000125149.72641.441301921.404700.459106.528005.40860HepG2CALR
C16orf70ENSG00000125149.71595.073502560.35150-0.682706.321904.82400HepG2CCAR1
C16orf70ENSG00000125149.73273.088302567.120100.350402.887802.09780HepG2CIRBP
C16orf70ENSG00000125149.72708.989702222.703700.285302.620901.54520HepG2CPSF7
C16orf70ENSG00000125149.72050.716502699.34990-0.396506.557905.64840HepG2CELF1
C16orf70ENSG00000125149.72552.451702902.40600-0.185402.463501.75840HepG2DAZAP1
C16orf70ENSG00000125149.71712.136902023.48280-0.241003.276002.37560HepG2DDX19B
C16orf70ENSG00000125149.72113.920901790.522700.239402.444801.35880HepG2DDX1
C16orf70ENSG00000125149.71171.218601723.15840-0.557006.723905.71490HepG2DDX21
C16orf70ENSG00000125149.71135.117301627.69740-0.520004.674103.69680HepG2DDX55
C16orf70ENSG00000125149.72534.011001748.112900.535502.730501.75890HepG2DDX59
C16orf70ENSG00000125149.72100.541602687.39100-0.355402.364701.79010HepG2DDX6
C16orf70ENSG00000125149.72387.504301693.382400.495506.066804.65280HepG2DHX30
C16orf70ENSG00000125149.72188.887001755.696000.318102.097401.47640HepG2DNAJC21
C16orf70ENSG00000125149.71269.717701755.98610-0.467804.168003.05840HepG2EEF2
C16orf70ENSG00000125149.73180.531202583.222600.300002.085001.56270HepG2EIF2S1
C16orf70ENSG00000125149.71742.609102779.61870-0.673605.761804.79340HepG2EIF4B
C16orf70ENSG00000125149.73765.010402863.451600.394808.071206.78190HepG2EIF4G1
C16orf70ENSG00000125149.72983.586703535.33910-0.244803.659602.98400HepG2ETF1
C16orf70ENSG00000125149.71785.621102725.29230-0.610006.096104.99650HepG2FIP1L1
C16orf70ENSG00000125149.71345.262902108.96080-0.648605.050803.56820HepG2FUS
C16orf70ENSG00000125149.71973.894002880.56380-0.545305.866104.88410HepG2FXR1
C16orf70ENSG00000125149.7729.169701269.22400-0.7996010.004208.36570HepG2GEMIN5
C16orf70ENSG00000125149.71351.778401762.28050-0.382602.947701.89380HepG2GNB2L1
C16orf70ENSG00000125149.72428.613102088.769900.217402.572401.62530HepG2HDGF
C16orf70ENSG00000125149.72292.214402667.42220-0.218702.415101.53390HepG2HNRNPA2B1
C16orf70ENSG00000125149.72645.375001871.960500.498809.813108.56690HepG2HNRNPF
C16orf70ENSG00000125149.72357.736602643.85210-0.165202.066201.47290HepG2HNRNPL
C16orf70ENSG00000125149.72842.065201665.341500.771009.154308.08300HepG2HNRNPLL
C16orf70ENSG00000125149.71382.014501958.58160-0.5030010.443109.32790HepG2HNRNPU
C16orf70ENSG00000125149.72651.631801843.323200.524502.138401.49610HepG2IGF2BP1
C16orf70ENSG00000125149.73399.130102715.932600.323602.499401.85430HepG2IGF2BP2
C16orf70ENSG00000125149.71650.723302549.04110-0.626902.193801.32740HepG2IGF2BP3
C16orf70ENSG00000125149.72304.420002000.622600.203903.040802.27500HepG2ILF2
C16orf70ENSG00000125149.72326.577501999.957200.218103.126102.04440HepG2KIF1C
C16orf70ENSG00000125149.71783.127102704.65020-0.601005.241804.08710HepG2LARP4
C16orf70ENSG00000125149.71343.548101726.48610-0.361803.144001.93330HepG2LARP7
C16orf70ENSG00000125149.72223.216402897.64360-0.382202.774902.14300HepG2MATR3
C16orf70ENSG00000125149.71304.012402205.73180-0.7583013.6132011.96550HepG2MSI2
C16orf70ENSG00000125149.72393.983002878.02290-0.265702.837002.06420HepG2NOL12
C16orf70ENSG00000125149.71811.517001476.631300.294802.091501.43690HepG2NSUN2
C16orf70ENSG00000125149.73593.855302641.080900.444304.022803.16230HepG2PABPC4
C16orf70ENSG00000125149.71129.965901938.63400-0.7788021.0309019.13080HepG2PARN
C16orf70ENSG00000125149.72407.431902826.74360-0.231602.984502.35760HepG2PCBP1
C16orf70ENSG00000125149.71476.889001746.89460-0.242202.332201.64950HepG2PPIL4
C16orf70ENSG00000125149.71476.685802107.21510-0.5130010.117308.77280HepG2PRPF4
C16orf70ENSG00000125149.71240.796702098.71760-0.758206.070204.32690HepG2PRPF6
C16orf70ENSG00000125149.72111.242202876.35330-0.446108.761807.89900HepG2PTBP1
C16orf70ENSG00000125149.72108.533102916.44210-0.4680013.3174012.22220HepG2PUM1
C16orf70ENSG00000125149.72437.590702914.30020-0.257702.548901.90470HepG2PUM2
C16orf70ENSG00000125149.73134.217602228.605700.4919013.0263011.85960HepG2PUS1
C16orf70ENSG00000125149.71023.122701926.53900-0.913006.834605.75240HepG2RAVER1
C16orf70ENSG00000125149.72151.029602924.23860-0.443006.178704.96030HepG2RBM15
C16orf70ENSG00000125149.72225.635402954.88400-0.408906.854706.12520HepG2RBM22
C16orf70ENSG00000125149.71389.180502081.85700-0.583606.519504.99080HepG2RBM27
C16orf70ENSG00000125149.71941.831903201.07520-0.7211022.4841021.23130HepG2NELFE
C16orf70ENSG00000125149.72355.798802981.42060-0.339805.820604.96970HepG2RECQL
C16orf70ENSG00000125149.7633.883601387.04990-1.1297023.7318022.21470HepG2RPS19
C16orf70ENSG00000125149.71374.058601920.03300-0.482704.749503.71590HepG2RPS2
C16orf70ENSG00000125149.71448.048701744.19100-0.268403.542502.82970HepG2SAFB2
C16orf70ENSG00000125149.74196.341202897.152600.534403.921903.11320HepG2SF3A3
C16orf70ENSG00000125149.72831.092501648.369100.7802013.3361011.90650HepG2SF3B1
C16orf70ENSG00000125149.71250.380302034.00050-0.7020023.4999021.92360HepG2SMN1
C16orf70ENSG00000125149.72559.456201834.096100.480702.858402.06410HepG2SNRNP70
C16orf70ENSG00000125149.72220.597103337.42340-0.5878018.1425017.15800HepG2SRFBP1
C16orf70ENSG00000125149.71991.436403125.73060-0.6504020.3312019.29800HepG2SRSF1
C16orf70ENSG00000125149.72650.493101839.220500.527106.082705.11480HepG2SRSF7
C16orf70ENSG00000125149.72569.338302897.65730-0.173501.938701.48980HepG2SSB
C16orf70ENSG00000125149.72017.667803084.97840-0.6126020.3423018.90270HepG2SUCLG1
C16orf70ENSG00000125149.71879.634402809.60150-0.5799012.0460011.00410HepG2TAF15
C16orf70ENSG00000125149.72027.877301623.146700.321102.580801.87660HepG2TARDBP
C16orf70ENSG00000125149.71305.053901903.04880-0.544208.425507.63820HepG2TIAL1
C16orf70ENSG00000125149.72934.016802331.343700.331602.861502.22290HepG2U2AF1
C16orf70ENSG00000125149.71971.963802480.58690-0.331005.423704.63260HepG2UTP3
C16orf70ENSG00000125149.71360.463702118.73660-0.639104.929103.53850HepG2XRCC6
C16orf70ENSG00000125149.73462.756502825.771800.293206.433105.68940HepG2ZNF622
C16orf70ENSG00000125149.7568.42360400.237400.506004.547703.85210K562AGGF1
C16orf70ENSG00000125149.7602.43560416.463700.532504.081603.28610K562AKAP8L
C16orf70ENSG00000125149.71171.21900640.014200.8717011.3641010.29350K562AQR
C16orf70ENSG00000125149.7836.66800516.407900.696003.797302.51750K562CNOT7
C16orf70ENSG00000125149.7396.26080604.42560-0.609106.346005.32210K562EIF2S2
C16orf70ENSG00000125149.7491.58830309.618100.666905.360304.22000K562EIF4A3
C16orf70ENSG00000125149.7515.60500321.988100.679206.668205.78700K562FXR1
C16orf70ENSG00000125149.7576.40860786.97350-0.449203.283702.41990K562HSPD1
C16orf70ENSG00000125149.7500.62960347.046600.528502.615801.76220K562NAA15
C16orf70ENSG00000125149.7746.30870496.121300.589002.889001.62410K562PABPC1
C16orf70ENSG00000125149.7665.10850413.028200.687205.989405.22810K562PUS1
C16orf70ENSG00000125149.7563.01520402.425000.484403.888403.20220K562RBM15
C16orf70ENSG00000125149.7273.67060373.79410-0.449802.042201.34590K562RPS19
C16orf70ENSG00000125149.7461.69350273.148100.757207.180605.76260K562SF3B4
C16orf70ENSG00000125149.7477.05220343.526600.473603.179502.42610K562SRSF1
C16orf70ENSG00000125149.7509.26660696.55670-0.451802.775901.52550K562STAU1
C16orf70ENSG00000125149.7589.70670758.26460-0.362702.556701.32080K562WRN
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for C16orf70 is not available on ENCORE database.





4 RBPs can affect the splicing of C16orf70 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEC16orf70ENSG00000125149.7chr16+671787366717878067178196671782796717927867179322-0.117000.000000.00000excludedHepG2U2AF1
SEC16orf70ENSG00000125149.7chr16+671598616715994567153997671540976716518867165232-0.064000.000870.01830excludedHepG2U2AF1
SEC16orf70ENSG00000125149.7chr16+6716853067168696671682576716837067173886671739770.094000.000070.00299includedHepG2HNRNPK
SEC16orf70ENSG00000125149.7chr16+671787366717878067178196671782796717927867179322-0.113000.004480.04870excludedHepG2U2AF2
SEC16orf70ENSG00000125149.7chr16+671598616715994567153997671540976716518867165232-0.066000.000040.00080excludedHepG2U2AF2
MXEC16orf70ENSG00000125149.7chr16+6715986167159945671651886716523267154014671540976716807067168168-0.104000.001270.025642includedHepG2U2AF1
MXEC16orf70ENSG00000125149.7chr16+6717488867174984671775406717767767174413671744976717819667178279-0.208000.002970.019942includedHepG2U2AF2
MXEC16orf70ENSG00000125149.7chr16+6716518867165232671663486716642867159861671599456716671967166814-0.080000.000070.000882includedHepG2U2AF2
MXEC16orf70ENSG00000125149.7chr16+67178736671787806717927867179322671781966717827967179472671795310.206000.001510.097471includedK562PUM1

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for C16orf70 is not avaliable on ENCORE database.