BORA

General Information

Gene Name       : BORA
Gene ID             : ENSG00000136122.15
Essential Gene : Yes

Functions

Localization

Domains (AlphaFold: BORA)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878BORAENSG00000136122.1525.6721.0923.38ENCSR000AEF
HepG2BORAENSG00000136122.158.6816.3112.49ENCSR985KAT
K562BORAENSG00000136122.1513.9314.4714.20ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for BORA is not avaliable on ENCORE database.



Proteins bound to RNA
  • BORA RNA is bound by 6 proteins.  







eCLIP assay for BORA is not avaliable on ENCORE database.





6 proteins are bound to BORA RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr137330549873305577+CDS,intron-Distal,intron-Proximal4.559684.85612K562PRPF8
chr137331210073312185+CDS,intron-Proximal3.586177.42773K562BUD13
chr137332083273320975+CDS3.138083.68829K562YBX3
chr137332294873323086+intron-Distal6.4181712.53103K562QKI
chr137331556673315622+intron-Distal4.210036.83037K562KHSRP
chr137332294073323050+intron-Distal5.6018312.57135HepG2QKI
chr137332317373323262+intron-Distal5.278599.77283HepG2QKI
chr137332318773323252+intron-Distal4.998813.78039K562QKI
chr137330323173303271+intron-Distal,intron-Proximal3.860594.00320K562AQR
chr137331544073315503+intron-Distal3.998323.45805K562KHSRP
chr137331236873312461+intron-Distal3.614715.35459K562KHSRP
chr137331562273315725+intron-Distal3.7026410.29051K562KHSRP
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for BORA is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for BORA is not available on ENCORE database.

  • 116 RBPs can affect the levels of BORA.  








The Knockdown/knockout RNA-Seq assay for BORA is not available on ENCORE database.





116 RBPs can affect the gene expression of BORA :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
BORAENSG00000136122.11193.81330267.81680-0.466602.572301.98260HepG2ACO1
BORAENSG00000136122.11196.38040300.68410-0.614603.338102.24980HepG2ADAR
BORAENSG00000136122.11151.59290269.08240-0.827806.226405.11970HepG2AKAP8L
BORAENSG00000136122.1174.95590179.89400-1.263006.664805.47210HepG2ASCC1
BORAENSG00000136122.11197.38730461.18470-1.2243017.3328015.88260HepG2AUH
BORAENSG00000136122.11101.58540279.08680-1.4580010.914909.28060HepG2BCLAF1
BORAENSG00000136122.1155.33180340.55090-2.6217033.1153031.44370HepG2BOP1
BORAENSG00000136122.11218.65240377.13260-0.786404.553303.59480HepG2CALR
BORAENSG00000136122.11124.62790267.76740-1.1034010.180909.06850HepG2CKAP4
BORAENSG00000136122.1193.31750166.35940-0.834102.837302.06230HepG2CNOT7
BORAENSG00000136122.11129.23980312.64310-1.2745010.154408.91730HepG2CPSF6
BORAENSG00000136122.11189.29900333.13580-0.815402.567601.50270HepG2CPSF7
BORAENSG00000136122.11217.97420308.34320-0.500402.857701.82250HepG2YBX3
BORAENSG00000136122.11118.00300198.39150-0.749503.450302.26160HepG2CSTF2
BORAENSG00000136122.11232.37670432.45170-0.896109.876508.80410HepG2CELF1
BORAENSG00000136122.11205.52800465.06320-1.1781018.4696016.86220HepG2DAZAP1
BORAENSG00000136122.11159.92500308.78190-0.949207.499505.72380HepG2DDX1
BORAENSG00000136122.1192.06200208.25910-1.177706.603805.67930HepG2DDX3X
BORAENSG00000136122.11137.63190315.80270-1.198208.220106.96690HepG2DDX55
BORAENSG00000136122.11115.62380355.02960-1.6185011.195709.31180HepG2DDX59
BORAENSG00000136122.1158.05020178.94820-1.624209.119208.06710HepG2DDX6
BORAENSG00000136122.11173.48590302.78200-0.803506.143805.12900HepG2DNAJC21
BORAENSG00000136122.11162.09620300.09090-0.888508.324707.26940HepG2DNAJC2
BORAENSG00000136122.11114.47950201.04860-0.812502.507301.46040HepG2AGO1
BORAENSG00000136122.1157.42620171.97830-1.582408.774007.75760HepG2EIF2S1
BORAENSG00000136122.11118.27820190.03250-0.684102.678302.04950HepG2EIF4A3
BORAENSG00000136122.11290.09760458.75190-0.661206.479905.29410HepG2EIF4G1
BORAENSG00000136122.11203.12370439.46600-1.1134011.213009.63910HepG2EIF4G2
BORAENSG00000136122.11180.33630529.47840-1.5539026.9934025.44350HepG2ETF1
BORAENSG00000136122.11190.27460261.71270-0.459902.082501.35920HepG2EWSR1
BORAENSG00000136122.11274.55330408.27600-0.572502.320101.61110HepG2FIP1L1
BORAENSG00000136122.11135.91870313.18130-1.204304.674703.36110HepG2FTO
BORAENSG00000136122.11391.81370191.806501.030408.149107.00900HepG2FXR1
BORAENSG00000136122.11161.05310354.40230-1.137908.463407.38570HepG2GPKOW
BORAENSG00000136122.11142.86290305.68250-1.097408.107107.08510HepG2HNRNPA1
BORAENSG00000136122.11303.40090427.37190-0.494303.800602.73240HepG2HNRNPA2B1
BORAENSG00000136122.11166.65560340.00950-1.028707.755606.64190HepG2HNRNPC
BORAENSG00000136122.11202.85340369.34790-0.864507.939206.80190HepG2HNRNPF
BORAENSG00000136122.11208.18320423.65860-1.0250013.1948011.82530HepG2HNRNPL
BORAENSG00000136122.11109.26590338.21300-1.6301015.2854013.97230HepG2HNRNPLL
BORAENSG00000136122.11200.52220337.76200-0.752206.599505.69780HepG2HNRNPU
BORAENSG00000136122.11208.49800363.70610-0.802706.263205.21800HepG2IGF2BP1
BORAENSG00000136122.1161.03290180.80880-1.566809.332108.17370HepG2IGF2BP2
BORAENSG00000136122.11216.25810345.01360-0.673906.555205.47440HepG2ILF2
BORAENSG00000136122.11331.05910510.22590-0.624003.619002.67010HepG2LARP4
BORAENSG00000136122.11284.21340191.873800.566702.499601.87520HepG2MAGOH
BORAENSG00000136122.11109.41240227.78820-1.057903.642702.44220HepG2METAP2
BORAENSG00000136122.11188.63680344.93980-0.870704.257503.04260HepG2MTPAP
BORAENSG00000136122.11183.46410290.00290-0.660602.361801.35990HepG2NONO
BORAENSG00000136122.11210.35320299.89270-0.511602.217701.54560HepG2NSUN2
BORAENSG00000136122.11109.22140175.81750-0.686802.645801.93860HepG2PABPC4
BORAENSG00000136122.11215.31930334.33380-0.634804.682503.61450HepG2PARN
BORAENSG00000136122.11113.80540231.40990-1.023905.365903.95400HepG2PCBP2
BORAENSG00000136122.11221.25780301.25770-0.445302.453201.75440HepG2PPIL4
BORAENSG00000136122.1199.38190243.60210-1.293508.335907.01760HepG2PRPF8
BORAENSG00000136122.11216.18420156.463200.466302.126201.63440HepG2PTBP1
BORAENSG00000136122.11179.86910440.19000-1.291209.650408.62920HepG2PUF60
BORAENSG00000136122.11279.39440467.25790-0.741908.971508.03360HepG2PUM1
BORAENSG00000136122.11298.57990466.93100-0.645105.501204.57080HepG2PUM2
BORAENSG00000136122.11145.83620442.55090-1.6015022.9545021.75340HepG2RBM22
BORAENSG00000136122.11258.75260160.686600.687202.983501.38120HepG2RBM47
BORAENSG00000136122.11310.10400174.126900.832506.006105.26010HepG2NELFE
BORAENSG00000136122.11338.01810162.178501.059409.945808.88910HepG2RECQL
BORAENSG00000136122.1193.24000397.81960-2.0931027.7632026.09180HepG2RPLP0
BORAENSG00000136122.11109.61410219.37520-1.001004.780303.55310HepG2RPS10
BORAENSG00000136122.1176.93750211.79110-1.4609010.619109.51010HepG2RPS19
BORAENSG00000136122.11193.12280286.79840-0.570502.662701.87630HepG2RPS2
BORAENSG00000136122.1188.55430167.08460-0.915903.733602.80510HepG2RPS3A
BORAENSG00000136122.1159.22180240.97150-2.0247015.6278014.03140HepG2RRP9
BORAENSG00000136122.11141.53760212.55530-0.586702.399601.52160HepG2SERBP1
BORAENSG00000136122.11142.72670334.76230-1.2299010.306609.02390HepG2SF3B1
BORAENSG00000136122.11226.56210422.02590-0.8974010.500209.27580HepG2SLBP
BORAENSG00000136122.11108.31750217.89460-1.008403.529401.72740HepG2SLTM
BORAENSG00000136122.11226.15080350.78400-0.633305.401004.55310HepG2SMN1
BORAENSG00000136122.11138.42660372.48240-1.4281010.145908.65340HepG2SNRNP70
BORAENSG00000136122.11126.59800499.85350-1.9813037.8645036.56660HepG2SRFBP1
BORAENSG00000136122.11423.08590170.028401.3151015.0611014.14640HepG2SRSF1
BORAENSG00000136122.11208.11180360.21030-0.791504.261002.99090HepG2SRSF3
BORAENSG00000136122.11228.45230434.59570-0.9278010.681609.55910HepG2SRSF5
BORAENSG00000136122.11164.81840362.85860-1.1385012.5221011.22610HepG2SRSF7
BORAENSG00000136122.1173.41020138.32840-0.914004.100603.45350HepG2SRSF9
BORAENSG00000136122.11297.43470434.00610-0.545104.453403.83430HepG2SSB
BORAENSG00000136122.11157.66750272.86210-0.791302.490101.30760HepG2STAU1
BORAENSG00000136122.11347.73520494.27880-0.507304.748803.97290HepG2SUCLG1
BORAENSG00000136122.11136.78440275.83820-1.011905.516404.21420HepG2SUPT6H
BORAENSG00000136122.1136.06450314.37260-3.1238034.9517033.07290HepG2SUPV3L1
BORAENSG00000136122.11219.95840152.832200.525202.339001.81650HepG2TAF15
BORAENSG00000136122.11131.54880329.66090-1.3254011.4707010.14610HepG2TARDBP
BORAENSG00000136122.1190.06990210.71040-1.226107.092405.62180HepG2TFIP11
BORAENSG00000136122.11199.77790140.427700.508502.191101.44480HepG2TIA1
BORAENSG00000136122.1190.25530328.22060-1.8626022.8627021.68600HepG2TIAL1
BORAENSG00000136122.11134.61320331.13130-1.2986015.7234014.53300HepG2TRIM56
BORAENSG00000136122.11309.38980430.00910-0.474902.999402.08480HepG2TUFM
BORAENSG00000136122.11202.12520349.35360-0.789404.077203.32070HepG2U2AF1
BORAENSG00000136122.1182.87850344.19390-2.054207.951206.19470HepG2U2AF2
BORAENSG00000136122.11201.44030455.13290-1.175909.141407.58190HepG2UBE2L3
BORAENSG00000136122.1164.65340185.70680-1.522209.966308.52540HepG2UCHL5
BORAENSG00000136122.1198.39730235.05940-1.2563010.577609.37150HepG2UPF1
BORAENSG00000136122.11152.32880241.60610-0.665503.922902.69740HepG2UTP18
BORAENSG00000136122.11106.64060258.52000-1.2775012.5749011.62120HepG2ZNF622
BORAENSG00000136122.11984.25870674.309800.545507.923807.03320K562AGGF1
BORAENSG00000136122.11886.97150701.664400.338002.529801.90460K562AKAP8L
BORAENSG00000136122.11914.02150736.242100.311902.745301.83580K562ATP5C1
BORAENSG00000136122.11318.30180467.20120-0.553604.074403.12330K562CPSF6
BORAENSG00000136122.111054.05060791.151100.413803.556601.88730K562DDX19B
BORAENSG00000136122.11351.92860479.13270-0.445102.918801.84680K562DDX3X
BORAENSG00000136122.11960.97790754.950600.348003.384302.40210K562DKC1
BORAENSG00000136122.11294.32910402.87580-0.452902.191101.38210K562FTO
BORAENSG00000136122.11379.70820520.58350-0.455203.490102.82230K562FXR1
BORAENSG00000136122.111114.03270586.260100.926109.239607.79560K562G3BP2
BORAENSG00000136122.11344.56990451.53350-0.390002.051001.52630K562HNRNPC
BORAENSG00000136122.111204.29480744.590700.693602.943502.08970K562KIF1C
BORAENSG00000136122.11267.51750380.85870-0.509602.168401.35330K562KRR1
BORAENSG00000136122.11959.42850712.797500.428603.339702.12590K562MAK16
BORAENSG00000136122.111205.13590834.136700.530702.623001.74170K562MBNL1
BORAENSG00000136122.111069.80600584.673900.871506.351704.80770K562NAA15
BORAENSG00000136122.11642.43790499.852800.362002.523901.35270K562NCBP2
BORAENSG00000136122.111431.208401063.983100.427703.788502.02020K562NOL12
BORAENSG00000136122.111433.74210695.755401.0430017.0252015.71930K562PUS1
BORAENSG00000136122.111075.38540677.994300.6654010.270109.15250K562RBM15
BORAENSG00000136122.11391.60200569.01490-0.539103.164702.08410K562RPS3
BORAENSG00000136122.11615.29170451.503200.446403.164701.77470K562SSB
BORAENSG00000136122.11441.86610608.18300-0.460903.085502.33700K562TARDBP
BORAENSG00000136122.11892.97250568.543200.651205.545703.88990K562U2AF1
BORAENSG00000136122.11818.89130587.094100.480004.747103.69900K562U2AF2
BORAENSG00000136122.11862.714801196.58350-0.472004.323902.56710K562UBE2L3
BORAENSG00000136122.111048.19510705.527800.571002.584601.35010K562UTP18
BORAENSG00000136122.11644.73650527.408700.289702.242801.47350K562WDR43
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for BORA is not available on ENCORE database.





16 RBPs can affect the splicing of BORA :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEBORAENSG00000136122.11chr13+7330541873305525733030637330323173309097733091740.308000.000000.00015includedK562SRSF1
SEBORAENSG00000136122.11chr13+733054187330552573303063733032317331209973312181-0.311000.000000.00003excludedK562SF3B4
SEBORAENSG00000136122.11chr13+733054187330552573303063733032317331209973312181-0.316000.000000.00024excludedK562AKAP8L
SEBORAENSG00000136122.11chr13+7330541873305525733030637330323173309097733091430.241000.000820.06645includedK562XRCC6
SEBORAENSG00000136122.11chr13+733054187330552573303063733032317331209973312181-0.519000.000020.00046excludedHepG2U2AF2
SEBORAENSG00000136122.11chr13+733054187330552573303063733032317331209973312181-0.301000.000070.00118excludedK562AQR
SEBORAENSG00000136122.11chr13+7330541873305525733030637330323173309097733091430.273000.000720.03010includedK562FXR1
SEBORAENSG00000136122.11chr13+733054187330552573303063733032317331209973312181-0.402000.001040.05230excludedK562EFTUD2
SEBORAENSG00000136122.11chr13+733054187330552573303063733032317331209973312181-0.249000.000300.00846excludedK562U2AF1
SEBORAENSG00000136122.11chr13+733054187330552573303063733032317331209973312181-0.348000.000000.00000excludedK562U2AF2
SEBORAENSG00000136122.11chr13+733054187330552573303063733032317330909773309143-0.390000.000180.00995excludedK562HNRNPU
SEBORAENSG00000136122.11chr13+733054187330552573303063733032317330909773309143-0.353000.000290.01050excludedK562AGGF1
SEBORAENSG00000136122.11chr13+7330541873305525733030637330323173309097733091740.269000.000630.02787includedK562PTBP1
SEBORAENSG00000136122.11chr13+733090977330914373305418733055257331209973312181-0.703000.000580.01220excludedK562HNRNPC
A3SSBORAENSG00000136122.11chr13+7332926773329466733292887332946673327789733279590.101000.000000.00000longerK562AQR
A5SSBORAENSG00000136122.11chr13+733030637330327173303063733032317330541873305525-0.137000.000520.04763shorterK562FXR1
MXEBORAENSG00000136122.11chr13+7330306373303231733054187330552573302060733021457330909773309143-0.183000.000350.060462includedK562MATR3
MXEBORAENSG00000136122.11chr13+7330306373303231733054187330552573302060733021457330909773309143-0.469000.000370.013402includedHepG2MATR3
MXEBORAENSG00000136122.11chr13+73305418733055257330909773309174733030637330323173312099733121810.223000.001480.045311includedK562PTBP1
MXEBORAENSG00000136122.11chr13+7330306373303231733054187330552573302060733021457330909773309143-0.270000.000000.000492includedK562PTBP1
MXEBORAENSG00000136122.11chr13+73303063733032317330541873305525733020607330214573309097733091430.151000.002220.037871includedK562PUS1
MXEBORAENSG00000136122.11chr13+73303063733032317331209973312181733020627330214573317674733177400.258000.003450.080021includedK562XRN2
MXEBORAENSG00000136122.11chr13+73303063733032317330541873305525733020607330214573309097733091430.210000.000050.003671includedK562AGGF1
MXEBORAENSG00000136122.11chr13+73305418733055257330909773309174733030637330323173312099733121810.265000.000000.000051includedK562SRSF1
MXEBORAENSG00000136122.11chr13+73305418733055257330909773309143733030637330323173312099733121810.264000.000080.002481includedK562SRSF1
MXEBORAENSG00000136122.11chr13+7330306373303231733054187330552573302060733021457330909773309143-0.201000.000090.002612includedK562SRSF1
MXEBORAENSG00000136122.11chr13+73305418733055257330909773309143733030637330323173312099733121810.260000.003390.098791includedK562FXR1
MXEBORAENSG00000136122.11chr13+73303063733032317330541873305525733020607330214573309097733091430.175000.003950.029481includedK562AQR
MXEBORAENSG00000136122.11chr13+73303063733032317330541873305525733020607330214573309097733091430.390000.000100.003291includedK562HNRNPC
MXEBORAENSG00000136122.11chr13+73303063733032317330541873305525733020607330214573309097733091430.177000.001180.046171includedK562HNRNPU
MXEBORAENSG00000136122.11chr13+7330541873305525733090977330914373303063733032317331209973312181-0.350000.000110.007492includedK562HNRNPU
MXEBORAENSG00000136122.11chr13+7330541873305525733090977330914373303063733032317331209973312181-0.253000.003540.049822includedK562SF3B4

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for BORA is not avaliable on ENCORE database.