ZRANB3

General Information

Gene Name       : ZRANB3
Gene ID             : ENSG00000121988.17
Essential Gene : No

Functions

Localization

Domains (AlphaFold: ZRANB3)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878ZRANB3ENSG00000121988.176.155.565.86ENCSR000AEF
HepG2ZRANB3ENSG00000121988.177.6112.6310.12ENCSR985KAT
K562ZRANB3ENSG00000121988.178.549.358.95ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for ZRANB3 is not avaliable on ENCORE database.



Proteins bound to RNA
  • ZRANB3 RNA is bound by 21 proteins.  







eCLIP assay for ZRANB3 is not avaliable on ENCORE database.





21 proteins are bound to ZRANB3 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr2135988157135988308-3'-UTR,CDS,intron-Distal4.593084.91614HepG2GRWD1
chr2135985383135985437-3'-UTR,CDS,intron-Distal,intron-Proximal4.241303.89826HepG2BCLAF1
chr2135965019135965080-3'-UTR,CDS,intron-Distal3.045143.55800HepG2BCLAF1
chr2136262026136262082-5'-UTR,CDS,intron-Distal,intron-Proximal3.516613.55754HepG2U2AF2
chr2136111040136111140-CDS,intron-Distal4.246449.80976HepG2BCLAF1
chr2136072926136073001-CDS,intron-Distal,intron-Proximal3.952013.56019HepG2GRWD1
chr2136261744136261822-CDS,intron-Distal,intron-Proximal4.422543.80512K562CSTF2T
chr2136107697136107759-CDS,intron-Distal4.533787.53358HepG2BCLAF1
chr2136107759136107786-CDS,intron-Distal,intron-Proximal5.091525.23259HepG2BCLAF1
chr2136148368136148393-CDS,intron-Distal,intron-Proximal3.308413.64266HepG2PPIG
chr2136111140136111198-CDS,intron-Distal3.337624.74886HepG2BCLAF1
chr2136072918136072994-CDS,intron-Distal,intron-Proximal3.054105.00905HepG2BCLAF1
chr2136111018136111040-CDS,intron-Distal,intron-Proximal3.728303.68471HepG2BCLAF1
chr2136286379136286449-intron-Distal3.172844.40834HepG2QKI
chr2136243110136243218-intron-Distal4.034533.47043HepG2KHSRP
chr2136257258136257348-intron-Distal3.459784.51091HepG2HNRNPL
chr2136250065136250144-intron-Distal3.029084.63410HepG2SUGP2
chr2136249912136249960-intron-Distal4.290864.51299HepG2SUGP2
chr2136202482136202578-intron-Distal3.411325.60020HepG2QKI
chr2136248040136248090-intron-Distal4.040373.16986HepG2QKI
chr2136248779136248882-intron-Distal4.400339.40001K562KHSRP
chr2136251118136251155-intron-Distal3.321563.69184HepG2SUGP2
chr2136236280136236355-intron-Distal3.110213.02891HepG2HNRNPL
chr2136276348136276484-intron-Distal3.391385.34137K562SAFB2
chr2136244369136244471-intron-Distal3.141373.27418HepG2HLTF
chr2136257041136257088-intron-Distal3.309763.59351HepG2MATR3
chr2136249960136249999-intron-Distal3.472514.14346HepG2SUGP2
chr2135964180135964350-intron-Distal5.7183011.94006HepG2PTBP1
chr2136258079136258166-intron-Distal4.440585.41654K562KHSRP
chr2136184983136185045-intron-Distal4.355724.05620HepG2MATR3
chr2136249464136249578-intron-Distal3.638559.10611K562KHSRP
chr2136251607136251670-intron-Distal3.811236.34081K562ILF3
chr2136270586136270669-intron-Distal3.699884.76004K562KHSRP
chr2136249578136249688-intron-Distal4.057189.06934K562KHSRP
chr2135964171135964347-intron-Distal5.190168.17201HepG2PCBP2
chr2136261479136261542-intron-Distal3.279064.41834HepG2HNRNPC
chr2136183569136183638-intron-Distal4.390493.78432HepG2MATR3
chr2136076079136076166-intron-Distal3.614913.17661HepG2HNRNPL
chr2136251606136251672-intron-Distal4.2802211.97743HepG2PTBP1
chr2136251593136251650-intron-Distal5.309247.70131HepG2PCBP2
chr2136245411136245527-intron-Distal3.018394.00731K562UCHL5
chr2136244413136244474-intron-Distal3.638953.12651K562SAFB2
chr2136251279136251354-intron-Distal4.915527.15419HepG2MATR3
chr2136249688136249769-intron-Distal4.211799.40001K562KHSRP
chr2136251650136251670-intron-Distal6.8275418.94347HepG2PCBP2
chr2136076015136076079-intron-Distal3.342753.41538HepG2HNRNPL
chr2136184714136184748-intron-Distal4.482415.16513HepG2HNRNPM
chr2136250300136250451-intron-Distal3.246444.82768K562MATR3
chr2136248509136248600-intron-Distal3.268785.54538HepG2PCBP2
chr2136251601136251708-intron-Distal4.8817211.73060K562PTBP1
chr2136183478136183541-intron-Distal4.466924.31720HepG2MATR3
chr2136131304136131392-intron-Distal4.650414.97123HepG2PCBP2
chr2136250527136250596-intron-Distal3.620925.78794HepG2SUGP2
chr2136251373136251455-intron-Distal4.623055.42395HepG2HNRNPM
chr2136018900136018997-intron-Distal4.182383.86368HepG2HNRNPM
chr2136250789136250835-intron-Distal4.283254.03915HepG2SUGP2
chr2136238104136238163-intron-Distal4.270063.93850HepG2CSTF2
chr2136251670136251721-intron-Distal5.4411116.52088HepG2PCBP2
chr2136251622136251687-intron-Distal4.444115.26569K562MATR3
chr2136250274136250420-intron-Distal3.874409.18834HepG2MATR3
chr2136105232136105460-intron-Distal3.042233.28806K562KHSRP
chr2136268282136268363-intron-Distal3.698743.01412K562SAFB2
chr2136140647136140724-intron-Distal3.936303.29248HepG2SUGP2
chr2136140649136140728-intron-Distal3.868963.24322HepG2MATR3
chr2136261588136261758-intron-Distal,intron-Proximal3.366074.13575K562KHSRP
chr2136121581136121718-intron-Distal6.0085114.93344HepG2PCBP2
chr2136245882136246009-intron-Distal4.3801215.31230K562KHSRP
chr2136130968136131040-intron-Distal3.972103.03891HepG2PTBP1
chr2136251618136251713-intron-Distal3.551884.67490HepG2MATR3
chr2136248637136248746-intron-Distal3.817096.83037K562KHSRP
chr2136250420136250487-intron-Distal4.639244.66737HepG2MATR3
chr2136268114136268259-intron-Distal3.789904.49353K562SLTM
chr2136245230136245301-intron-Distal3.687733.19638K562SAFB2
chr2136226742136226832-intron-Distal3.033893.20028K562TARDBP
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for ZRANB3 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for ZRANB3 is not available on ENCORE database.

  • 103 RBPs can affect the levels of ZRANB3.  








The Knockdown/knockout RNA-Seq assay for ZRANB3 is not available on ENCORE database.





103 RBPs can affect the gene expression of ZRANB3 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
ZRANB3ENSG00000121988.13188.11520314.41950-0.741104.039502.78700HepG2AKAP8
ZRANB3ENSG00000121988.13461.43240692.33140-0.585306.765305.76570HepG2AUH
ZRANB3ENSG00000121988.13271.71900436.36760-0.683403.898702.78590HepG2BCCIP
ZRANB3ENSG00000121988.13254.92830379.16500-0.572703.031802.08930HepG2BCLAF1
ZRANB3ENSG00000121988.13213.34000368.54830-0.788705.594504.77970HepG2BOP1
ZRANB3ENSG00000121988.13327.66570414.17090-0.338002.168601.56890HepG2CKAP4
ZRANB3ENSG00000121988.13238.51520374.35490-0.650302.676601.59070HepG2CPSF7
ZRANB3ENSG00000121988.13314.22050586.61700-0.9006011.9096010.75450HepG2CELF1
ZRANB3ENSG00000121988.13517.24170630.70770-0.286102.198001.52570HepG2DAZAP1
ZRANB3ENSG00000121988.13285.11610393.18110-0.463602.891601.70790HepG2DDX1
ZRANB3ENSG00000121988.13207.46570424.88650-1.0342010.010808.80720HepG2DDX21
ZRANB3ENSG00000121988.13341.79410638.87820-0.902405.206904.37240HepG2DDX3X
ZRANB3ENSG00000121988.13223.99930429.04230-0.937606.593405.46130HepG2DDX55
ZRANB3ENSG00000121988.13188.97680548.64690-1.5377011.3584010.20660HepG2DDX6
ZRANB3ENSG00000121988.13284.51210385.53040-0.438402.789302.08440HepG2DNAJC21
ZRANB3ENSG00000121988.13241.81670382.15460-0.660206.218305.29690HepG2DNAJC2
ZRANB3ENSG00000121988.13294.15920403.12640-0.454602.144401.33260HepG2EEF2
ZRANB3ENSG00000121988.13183.38410527.58900-1.5245010.483809.37600HepG2EIF2S1
ZRANB3ENSG00000121988.13214.03740327.23640-0.612502.981102.04780HepG2EIF3D
ZRANB3ENSG00000121988.13352.57910583.12600-0.725903.703302.96730HepG2EIF4A3
ZRANB3ENSG00000121988.13422.16220596.09150-0.497703.326202.43820HepG2EIF4G2
ZRANB3ENSG00000121988.13186.74750292.49260-0.647304.101502.65010HepG2FAM120A
ZRANB3ENSG00000121988.13244.26170458.80980-0.909505.508504.45740HepG2FIP1L1
ZRANB3ENSG00000121988.13372.09350545.68570-0.552402.224301.62480HepG2G3BP1
ZRANB3ENSG00000121988.13206.14360291.35810-0.499102.560201.70380HepG2GEMIN5
ZRANB3ENSG00000121988.13276.49440432.94940-0.646904.299103.44890HepG2HNRNPC
ZRANB3ENSG00000121988.13429.00650574.51130-0.421303.733202.95810HepG2HNRNPL
ZRANB3ENSG00000121988.13304.27070403.53730-0.407302.359201.68840HepG2IGF2BP1
ZRANB3ENSG00000121988.13295.49950554.72180-0.908605.280304.37440HepG2IGF2BP2
ZRANB3ENSG00000121988.13317.00040439.31730-0.470804.387303.48320HepG2ILF2
ZRANB3ENSG00000121988.13162.42380267.56650-0.720103.197001.76410HepG2ILF3
ZRANB3ENSG00000121988.13407.34130725.98860-0.833704.324203.27930HepG2LARP4
ZRANB3ENSG00000121988.13316.46570452.19790-0.514903.262302.03090HepG2LARP7
ZRANB3ENSG00000121988.13407.82670588.31760-0.528602.387601.77670HepG2MAGOH
ZRANB3ENSG00000121988.13341.85110591.64880-0.791404.209503.44800HepG2MATR3
ZRANB3ENSG00000121988.13204.43270342.47360-0.744403.075101.96370HepG2METAP2
ZRANB3ENSG00000121988.13252.94140371.51230-0.554602.745401.94020HepG2MSI2
ZRANB3ENSG00000121988.13350.35990605.61670-0.789603.916303.16660HepG2NCBP2
ZRANB3ENSG00000121988.13238.98280393.98370-0.721203.079901.92280HepG2NONO
ZRANB3ENSG00000121988.13147.74270250.83900-0.763703.047502.11340HepG2PABPC1
ZRANB3ENSG00000121988.13303.10450539.48470-0.831804.579603.66250HepG2PABPC4
ZRANB3ENSG00000121988.13279.88220497.59650-0.830202.537201.54360HepG2PCBP2
ZRANB3ENSG00000121988.13287.36870383.60100-0.416702.584501.87100HepG2PPIL4
ZRANB3ENSG00000121988.13229.01060330.96010-0.531202.456101.69330HepG2PRPF8
ZRANB3ENSG00000121988.13405.98740597.02330-0.556404.310503.58600HepG2PUF60
ZRANB3ENSG00000121988.13408.52110591.60690-0.534204.666203.88660HepG2QKI
ZRANB3ENSG00000121988.13222.51310480.35570-1.110203.526202.73300HepG2RAVER1
ZRANB3ENSG00000121988.13401.68160556.91020-0.471403.674402.70190HepG2RBM15
ZRANB3ENSG00000121988.13386.99120536.90210-0.472403.388602.64840HepG2RBM25
ZRANB3ENSG00000121988.13264.75840441.47340-0.737705.823504.88450HepG2RPLP0
ZRANB3ENSG00000121988.13276.58960471.55720-0.769702.325301.45890HepG2RPS10
ZRANB3ENSG00000121988.13223.81620318.42880-0.508702.680702.07470HepG2RPS19
ZRANB3ENSG00000121988.13189.35860327.38690-0.789904.315803.35650HepG2RRP9
ZRANB3ENSG00000121988.13265.77730383.00530-0.527103.997403.24640HepG2SAFB2
ZRANB3ENSG00000121988.13226.74190319.57180-0.495102.408401.52870HepG2SERBP1
ZRANB3ENSG00000121988.13299.14360513.48350-0.779505.229904.28390HepG2SF3A3
ZRANB3ENSG00000121988.13428.32590568.71520-0.409003.260202.62450HepG2SF3B4
ZRANB3ENSG00000121988.13452.78610572.48530-0.338402.513601.84050HepG2SLBP
ZRANB3ENSG00000121988.13362.22000446.63950-0.302201.913601.36220HepG2SMN1
ZRANB3ENSG00000121988.13201.25890403.08720-1.002005.837704.69480HepG2SNRNP70
ZRANB3ENSG00000121988.13715.34220593.598100.269001.770801.36870HepG2SRSF1
ZRANB3ENSG00000121988.13381.14030589.49290-0.629206.668105.75370HepG2SRSF5
ZRANB3ENSG00000121988.13297.65120402.62100-0.435803.035902.31210HepG2SRSF7
ZRANB3ENSG00000121988.13269.23470482.90870-0.8429010.551509.59680HepG2SRSF9
ZRANB3ENSG00000121988.13158.66220239.63050-0.594902.571801.51520HepG2STIP1
ZRANB3ENSG00000121988.13308.79750427.10170-0.467902.188901.57730HepG2SUPV3L1
ZRANB3ENSG00000121988.13374.47970490.26580-0.388702.491301.69510HepG2TIA1
ZRANB3ENSG00000121988.13249.78450417.87360-0.742406.501805.79490HepG2TIAL1
ZRANB3ENSG00000121988.13234.23950421.64730-0.848109.559108.60740HepG2TRIM56
ZRANB3ENSG00000121988.13428.38280583.29280-0.445302.967202.05850HepG2TUFM
ZRANB3ENSG00000121988.13144.93060252.29990-0.799804.495903.52700HepG2UCHL5
ZRANB3ENSG00000121988.13270.22600455.38290-0.752908.165907.07100HepG2UPF1
ZRANB3ENSG00000121988.13264.53150391.08570-0.564002.213101.32030HepG2UPF2
ZRANB3ENSG00000121988.13299.76110439.65200-0.552504.578903.83970HepG2UTP3
ZRANB3ENSG00000121988.13238.97420500.83190-1.0675016.8105015.74540HepG2ZNF622
ZRANB3ENSG00000121988.13338.94640453.16360-0.419002.353001.45850K562AKAP8
ZRANB3ENSG00000121988.13265.95660429.16860-0.690403.889903.11360K562AKAP8L
ZRANB3ENSG00000121988.13270.31630623.21960-1.2051014.4082013.21470K562AQR
ZRANB3ENSG00000121988.13315.55250412.16500-0.385302.327601.44840K562BCLAF1
ZRANB3ENSG00000121988.13183.98360320.92460-0.802704.929803.75150K562BOP1
ZRANB3ENSG00000121988.13348.87590492.97150-0.498802.906701.69470K562CCDC124
ZRANB3ENSG00000121988.13367.97230524.78900-0.512103.007001.49590K562CKAP4
ZRANB3ENSG00000121988.13345.33690517.71730-0.584202.542401.53140K562CNOT7
ZRANB3ENSG00000121988.13681.28870953.23820-0.484604.355103.12290K562CELF1
ZRANB3ENSG00000121988.13203.72540284.48840-0.481702.456401.47720K562DDX3X
ZRANB3ENSG00000121988.13450.16470564.18300-0.325702.228101.63350K562DDX47
ZRANB3ENSG00000121988.13118.81440350.32380-1.5600016.0864013.67400K562EFTUD2
ZRANB3ENSG00000121988.13213.38660375.15250-0.814005.091703.63530K562EIF3D
ZRANB3ENSG00000121988.13253.07940397.82870-0.652604.433303.34200K562FIP1L1
ZRANB3ENSG00000121988.13200.14990347.18960-0.794605.367304.16950K562FMR1
ZRANB3ENSG00000121988.13183.33700294.26640-0.682603.615202.55760K562FTO
ZRANB3ENSG00000121988.13179.97290325.81240-0.856305.985704.81820K562GPKOW
ZRANB3ENSG00000121988.13367.27890568.09930-0.629304.434203.48130K562GRSF1
ZRANB3ENSG00000121988.13196.37770318.19340-0.696304.261903.53740K562HNRNPC
ZRANB3ENSG00000121988.13298.77510472.68270-0.661802.824101.38640K562ILF2
ZRANB3ENSG00000121988.13128.13500278.18290-1.118406.298204.82680K562KRR1
ZRANB3ENSG00000121988.13206.37620318.02600-0.623902.606701.76060K562METAP2
ZRANB3ENSG00000121988.13572.84890826.48180-0.528803.674202.37120K562MSI2
ZRANB3ENSG00000121988.13335.67500467.94570-0.479303.894302.94910K562MTPAP
ZRANB3ENSG00000121988.13229.07570357.66700-0.642803.147902.19680K562NAA15
ZRANB3ENSG00000121988.13237.30920345.03190-0.540002.607601.36540K562NONO
ZRANB3ENSG00000121988.13387.46780519.96060-0.424303.719402.86890K562NSUN2
ZRANB3ENSG00000121988.13139.02880307.27440-1.144105.142003.67760K562PABPN1
ZRANB3ENSG00000121988.13253.50240388.78810-0.617004.079702.88580K562PCBP2
ZRANB3ENSG00000121988.13243.69370340.80220-0.483902.045101.33050K562PCBP3
ZRANB3ENSG00000121988.13177.57080261.41810-0.558002.762601.96170K562POLR2G
ZRANB3ENSG00000121988.13149.33900340.90380-1.190809.225407.85020K562PRPF8
ZRANB3ENSG00000121988.13324.40570424.51940-0.388002.308001.69430K562PTBP1
ZRANB3ENSG00000121988.13604.57210845.99740-0.484703.958302.98710K562PUF60
ZRANB3ENSG00000121988.13270.70700425.74120-0.653202.412001.89720K562PUS1
ZRANB3ENSG00000121988.13298.66870414.71810-0.473602.499301.93100K562RBM15
ZRANB3ENSG00000121988.13247.77950407.09660-0.716305.544204.30630K562RBM22
ZRANB3ENSG00000121988.13188.64310297.49140-0.657203.955802.32160K562RBM25
ZRANB3ENSG00000121988.13194.34900378.02230-0.959803.804801.92980K562RBM39
ZRANB3ENSG00000121988.13227.67240347.29370-0.609202.912202.07210K562RPS19
ZRANB3ENSG00000121988.13324.75410513.02250-0.659706.757305.53100K562SF3A3
ZRANB3ENSG00000121988.13140.51000309.83100-1.140807.857406.16910K562SF3B1
ZRANB3ENSG00000121988.13176.12500326.14000-0.888907.558106.09870K562SF3B4
ZRANB3ENSG00000121988.13141.09190322.73860-1.193705.394703.48960K562SNRNP200
ZRANB3ENSG00000121988.13387.24620525.59850-0.440703.779502.70470K562SRPK2
ZRANB3ENSG00000121988.13255.51970416.16370-0.703705.397004.41610K562SRSF1
ZRANB3ENSG00000121988.13256.88270393.01840-0.613504.163902.83280K562SRSF5
ZRANB3ENSG00000121988.13251.84950343.90620-0.449502.799301.62600K562SRSF7
ZRANB3ENSG00000121988.13197.24640330.14870-0.743104.107102.84970K562SUPV3L1
ZRANB3ENSG00000121988.13312.24400421.19950-0.431802.322301.67130K562TARDBP
ZRANB3ENSG00000121988.13276.53590406.29060-0.555003.753602.78010K562TIA1
ZRANB3ENSG00000121988.13171.08650274.41150-0.681603.393902.35250K562TIAL1
ZRANB3ENSG00000121988.13237.65800349.38170-0.555902.802001.77610K562UCHL5
ZRANB3ENSG00000121988.13385.02840551.32280-0.517904.967304.03450K562UPF1
ZRANB3ENSG00000121988.13295.27940471.75350-0.676005.776904.48850K562WDR3
ZRANB3ENSG00000121988.13342.27240490.54150-0.519204.941203.83950K562WDR43
ZRANB3ENSG00000121988.13557.38880702.06370-0.332902.108001.36480K562ZC3H8
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for ZRANB3 is not available on ENCORE database.





4 RBPs can affect the splicing of ZRANB3 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEZRANB3ENSG00000121988.13chr2-1362677571362679241362618981362620661362886961362887690.094000.003920.06777includedK562U2AF1
MXEZRANB3ENSG00000121988.13chr2-136072928136073100136103119136103205136071058136071175136107553136107785-0.409000.000150.015982includedHepG2NOLC1
MXEZRANB3ENSG00000121988.13chr2-1361031191361032051361075531361077851360729281360731001361110191361111980.350000.001460.027231includedK562HNRNPC
MXEZRANB3ENSG00000121988.13chr2-1361031191361032051361075531361077851360729281360731001361110191361111980.302000.000430.014561includedK562FXR2

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for ZRANB3 is not avaliable on ENCORE database.