VPS28

General Information

Gene Name       : VPS28
Gene ID             : ENSG00000160948.13
Essential Gene : Yes

Functions

Localization

Domains (AlphaFold: VPS28)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878VPS28ENSG00000160948.1324.0044.4534.23ENCSR000AEF
HepG2VPS28ENSG00000160948.1344.6523.6334.14ENCSR985KAT
K562VPS28ENSG00000160948.1371.4854.7563.12ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for VPS28 is not avaliable on ENCORE database.



Proteins bound to RNA
  • VPS28 RNA is bound by 26 proteins.  







eCLIP assay for VPS28 is not avaliable on ENCORE database.





26 proteins are bound to VPS28 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr8145649430145649462-3'-UTR,CDS,intron-Distal3.384419.01025HepG2PPIG
chr8145650723145650761-3'-UTR,5'-UTR,intron-Distal,intron-Proximal5.481967.00086K562DDX24
chr8145650975145651014-3'-UTR,5'-UTR,intron-Distal,intron-Proximal3.837227.67169K562SF3B4
chr8145650171145650279-3'-UTR,CDS,intron-Distal,intron-Proximal4.6176325.62353K562SF3B4
chr8145649816145649886-3'-UTR,intron-Distal4.676875.69037K562RBFOX2
chr8145650841145650907-3'-UTR,5'-UTR,intron-Distal4.7369915.17092K562DDX24
chr8145650841145650897-3'-UTR,5'-UTR,intron-Distal4.0781610.42818K562SF3B4
chr8145649422145649449-3'-UTR,CDS,intron-Distal,intron-Proximal3.777785.21096K562DDX55
chr8145650592145650653-3'-UTR,5'-UTR,intron-Distal3.5521511.36537K562BUD13
chr8145650958145651032-3'-UTR,5'-UTR,intron-Distal,intron-Proximal5.7649412.32249K562ZNF622
chr8145650728145650767-3'-UTR,5'-UTR,intron-Distal,intron-Proximal4.042986.75234K562PRPF8
chr8145649993145650071-3'-UTR,intron-Distal,intron-Proximal3.147955.01757HepG2RBFOX2
chr8145650824145650911-3'-UTR,5'-UTR,intron-Distal3.8464911.24100K562RBFOX2
chr8145650602145650649-3'-UTR,5'-UTR,intron-Distal3.152383.04054K562GTF2F1
chr8145650850145650927-3'-UTR,5'-UTR,intron-Distal3.388324.92664K562DDX51
chr8145650855145650909-3'-UTR,5'-UTR,intron-Distal4.718444.79197K562ZC3H11A
chr8145650830145650910-3'-UTR,5'-UTR,intron-Distal3.283784.24083K562NCBP2
chr8145650825145650916-3'-UTR,5'-UTR,intron-Distal4.320209.79046K562PRPF8
chr8145650216145650303-3'-UTR,intron-Distal,intron-Proximal4.6395925.11260K562AQR
chr8145650840145650920-3'-UTR,5'-UTR,intron-Distal3.886289.20548HepG2RBFOX2
chr8145650603145650649-3'-UTR,5'-UTR,intron-Distal3.662136.46304K562SF3B4
chr8145650603145650650-3'-UTR,5'-UTR,intron-Distal3.720985.69590K562DDX24
chr8145649273145649307-3'-UTR,CDS,intron-Distal3.048264.80218K562UCHL5
chr8145650615145650669-3'-UTR,5'-UTR,intron-Distal3.857448.17775HepG2RBFOX2
chr8145650161145650200-3'-UTR,CDS,intron-Distal3.296584.89070K562UCHL5
chr8145649668145649724-3'-UTR,intron-Distal,intron-Proximal3.948273.31322HepG2SF3B4
chr8145650168145650216-3'-UTR,CDS,intron-Distal,intron-Proximal3.3451010.67768K562AQR
chr8145650964145651020-3'-UTR,5'-UTR,intron-Distal,intron-Proximal3.848595.82228HepG2RBFOX2
chr8145650974145651042-3'-UTR,5'-UTR,intron-Distal,intron-Proximal4.244154.61288HepG2PRPF4
chr8145652289145652344-3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal3.462694.72321K562SRSF1
chr8145650192145650282-3'-UTR,CDS,intron-Distal,intron-Proximal4.088229.86309HepG2AQR
chr8145649830145649893-3'-UTR,intron-Distal5.8775416.08527HepG2RBFOX2
chr8145649147145649211-3'-UTR,CDS,intron-Distal,intron-Proximal3.012743.32520K562APOBEC3C
chr8145650534145650581-3'-UTR,5'-UTR,intron-Distal4.762287.30117HepG2SF3B4
chr8145650579145650658-3'-UTR,5'-UTR,intron-Distal3.590289.91500K562RBFOX2
chr8145649094145649156-3'-UTR,intron-Distal,intron-Proximal4.4857315.90101K562PABPC4
chr8145650619145650665-3'-UTR,5'-UTR,intron-Distal4.404534.57682HepG2SF3B4
chr8145650711145650779-3'-UTR,5'-UTR,intron-Distal,intron-Proximal5.140049.48522K562RBFOX2
chr8145650435145650496-3'-UTR,5'-UTR,intron-Distal,intron-Proximal3.573499.61299K562BUD13
chr8145650607145650660-3'-UTR,5'-UTR,intron-Distal3.805015.99324K562MTPAP
chr8145650961145651031-3'-UTR,5'-UTR,intron-Distal,intron-Proximal3.5496613.83203K562BUD13
chr8145649156145649205-3'-UTR,CDS,intron-Distal,intron-Proximal4.2014011.09436K562PABPC4
chr8145650610145650654-3'-UTR,5'-UTR,intron-Distal3.329183.14061K562LSM11
chr8145650082145650101-3'-UTR,intron-Distal,intron-Proximal4.2683810.30697K562AQR
chr8145650827145650926-3'-UTR,5'-UTR,intron-Distal3.1657218.57716K562BUD13
chr8145650551145650581-3'-UTR,5'-UTR,intron-Distal4.377536.59856K562SF3B4
chr8145649148145649216-3'-UTR,CDS,intron-Distal,intron-Proximal3.029383.18660HepG2PABPN1
chr8145649414145649518-3'-UTR,CDS,intron-Distal,intron-Proximal3.113986.45121HepG2PABPN1
chr8145649899145649952-3'-UTR,intron-Distal4.058296.50806K562RBFOX2
chr8145649893145649966-3'-UTR,intron-Distal5.2623827.58978HepG2RBFOX2
chr8145650767145650805-3'-UTR,5'-UTR,intron-Distal,intron-Proximal3.823305.25185K562PRPF8
chr8145650982145651042-3'-UTR,5'-UTR,intron-Distal,intron-Proximal4.2251010.58560K562AQR
chr8145650222145650279-3'-UTR,intron-Distal,intron-Proximal4.068997.26711HepG2EFTUD2
chr8145650058145650082-3'-UTR,intron-Distal,intron-Proximal3.842338.67867K562AQR
chr8145650233145650280-3'-UTR,intron-Distal,intron-Proximal3.664938.55260K562BUD13
chr8145650201145650268-3'-UTR,CDS,intron-Distal,intron-Proximal3.105906.49379K562EFTUD2
chr8145649019145649053-3'-UTR,intron-Distal,intron-Proximal4.608285.94584K562PABPC4
chr8145650368145650435-3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal3.239636.61971K562YBX3
chr8145651068145651132-5'-UTR,CDS,intron-Distal,intron-Proximal3.932478.69525HepG2PPIG
chr8145651399145651436-5'-UTR,CDS,intron-Distal,intron-Proximal3.003953.21309HepG2GRWD1
chr8145651159145651212-5'-UTR,intron-Distal,intron-Proximal4.320983.82050HepG2SF3B4
chr8145651165145651207-5'-UTR,intron-Distal,intron-Proximal4.633849.04180K562SF3B4
chr8145651378145651446-5'-UTR,CDS,intron-Distal,intron-Proximal3.528928.66760K562UCHL5
chr8145651066145651151-5'-UTR,CDS,intron-Distal,intron-Proximal4.153739.28811HepG2GRWD1
chr8145653827145653894-5'-UTR,intron-Distal3.1247510.98267HepG2PRPF8
chr8145653849145653876-5'-UTR,intron-Distal3.708287.18622K562PRPF8
chr8145652290145652325-CDS,intron-Distal,intron-Proximal3.521017.50590K562DDX3X
chr8145652289145652325-CDS,intron-Distal,intron-Proximal4.374308.63879K562UCHL5
chr8145651571145651624-CDS,intron-Distal,intron-Proximal4.124695.72723HepG2EFTUD2
chr8145651537145651565-CDS,intron-Distal,intron-Proximal4.201525.31213HepG2PRPF8
chr8145651552145651640-CDS,intron-Distal,intron-Proximal3.007489.66390HepG2AQR
chr8145651577145651592-CDS,intron-Distal,intron-Proximal3.217958.20368K562ZNF622
chr8145651561145651592-CDS,intron-Distal,intron-Proximal3.173813.80299HepG2GRWD1
chr8145651565145651644-CDS,intron-Distal,intron-Proximal3.5931721.43761K562SF3B4
chr8145652236145652299-CDS,intron-Distal,intron-Proximal4.4001917.48691HepG2PRPF8
chr8145651557145651628-CDS,intron-Distal,intron-Proximal3.1484714.02679K562BUD13
chr8145651536145651624-CDS,intron-Distal,intron-Proximal5.2812441.59406K562AQR
chr8145651571145651611-CDS,intron-Distal,intron-Proximal3.458806.69747HepG2PRPF8
chr8145652209145652234-intron-Distal,intron-Proximal4.331157.30031K562AQR
chr8145652018145652030-intron-Distal4.021033.32022K562UCHL5
chr8145652155145652209-intron-Distal,intron-Proximal4.3108320.92172K562AQR
chr8145653176145653351-intron-Distal3.454104.52780K562HNRNPK
chr8145653825145653849-intron-Distal3.733728.91060K562PRPF8
chr8145652156145652219-intron-Distal,intron-Proximal3.4452410.10040K562PRPF8
chr8145652011145652060-intron-Distal4.239725.68247K562SF3B4
chr8145652246145652287-intron-Distal,intron-Proximal5.8583935.97100K562AQR
chr8145652113145652156-intron-Distal3.546466.14054K562PRPF8
chr8145652014145652049-intron-Distal3.788114.95247K562PRPF8
chr8145652287145652291-intron-Distal,intron-Proximal5.5405427.89973K562AQR
chr8145652234145652246-intron-Distal,intron-Proximal5.353348.03507K562AQR
chr8145652279145652292-intron-Distal,intron-Proximal3.585117.07622HepG2AQR
chr8145652186145652211-intron-Distal,intron-Proximal3.541136.63359K562BUD13
chr8145652255145652279-intron-Distal,intron-Proximal5.452438.88638HepG2AQR
chr8145652128145652224-intron-Distal,intron-Proximal5.3768511.78873K562EFTUD2
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for VPS28 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for VPS28 is not available on ENCORE database.

  • 96 RBPs can affect the levels of VPS28.  








The Knockdown/knockout RNA-Seq assay for VPS28 is not available on ENCORE database.





96 RBPs can affect the gene expression of VPS28 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
VPS28ENSG00000160948.9778.16810486.089200.6788010.433109.41000HepG2ACO1
VPS28ENSG00000160948.9638.28720488.394800.386103.315902.48550HepG2AKAP8L
VPS28ENSG00000160948.9877.40650562.735700.640705.496904.40770HepG2ASCC1
VPS28ENSG00000160948.9519.63490229.112401.1813013.6579012.47020HepG2BOP1
VPS28ENSG00000160948.9663.17110350.898200.918206.157505.01730HepG2CNOT7
VPS28ENSG00000160948.9341.64260210.338600.699704.224603.39070HepG2CPSF6
VPS28ENSG00000160948.9557.44640391.450500.509904.443403.66300HepG2CELF1
VPS28ENSG00000160948.9562.58010420.948300.418303.574402.75140HepG2DAZAP1
VPS28ENSG00000160948.9915.49040651.449000.490803.433502.74560HepG2DDX3X
VPS28ENSG00000160948.9362.20650197.992600.871306.611005.55930HepG2DNAJC21
VPS28ENSG00000160948.9320.82280196.237800.709106.188605.27000HepG2DNAJC2
VPS28ENSG00000160948.9406.83250285.110900.512802.241801.41040HepG2EEF2
VPS28ENSG00000160948.9801.84640537.957400.575704.379003.64290HepG2EIF2S1
VPS28ENSG00000160948.9885.77040594.390700.575404.094003.32060HepG2EIF4A3
VPS28ENSG00000160948.9677.33500397.793700.767707.362706.06230HepG2EIF4G2
VPS28ENSG00000160948.9802.55280556.464200.528203.657602.89680HepG2G3BP1
VPS28ENSG00000160948.9481.32730297.131800.695804.049902.37280HepG2HNRNPA0
VPS28ENSG00000160948.9604.07350383.464700.655505.678304.74350HepG2HNRNPL
VPS28ENSG00000160948.9373.06780227.545500.713204.379703.60280HepG2HNRNPLL
VPS28ENSG00000160948.9375.95000220.868000.767307.206106.26440HepG2HNRNPU
VPS28ENSG00000160948.9413.06930301.668300.453302.748502.02700HepG2IGF2BP1
VPS28ENSG00000160948.9801.01570565.568300.502003.558002.80180HepG2IGF2BP2
VPS28ENSG00000160948.9348.33370225.609700.626505.402004.40490HepG2ILF2
VPS28ENSG00000160948.9532.05500342.159900.636803.424901.93410HepG2ILF3
VPS28ENSG00000160948.9562.87820376.154300.581402.774001.94210HepG2LARP4
VPS28ENSG00000160948.91116.17480617.750000.853409.337008.21350HepG2NCBP2
VPS28ENSG00000160948.9375.07350231.320100.697203.093701.59880HepG2NIP7
VPS28ENSG00000160948.9673.32540417.409100.689707.778406.51600HepG2NOL12
VPS28ENSG00000160948.9249.09100143.621400.794303.137201.59440HepG2NOLC1
VPS28ENSG00000160948.9558.43600320.850700.799404.367003.23650HepG2PABPC1
VPS28ENSG00000160948.9435.60110196.997001.1447014.8813013.24770HepG2PPIL4
VPS28ENSG00000160948.9651.01260526.003400.307502.429401.91090HepG2PTBP1
VPS28ENSG00000160948.9588.65200398.441600.562904.353403.62560HepG2PUF60
VPS28ENSG00000160948.9738.60400422.949400.8042013.9949012.87580HepG2PUM1
VPS28ENSG00000160948.9611.62770495.117300.304802.347401.76890HepG2PUS1
VPS28ENSG00000160948.9872.12940569.580300.614504.122603.38090HepG2QKI
VPS28ENSG00000160948.9805.88140645.087000.321001.969001.51230HepG2RBM22
VPS28ENSG00000160948.9689.58010516.966400.415502.474801.83320HepG2RBM25
VPS28ENSG00000160948.9506.51430308.553800.715002.895901.87980HepG2RBM27
VPS28ENSG00000160948.9426.27290250.561600.766503.384802.21130HepG2RCC2
VPS28ENSG00000160948.9817.44040585.354500.481703.114202.54640HepG2NELFE
VPS28ENSG00000160948.9496.87040330.046300.590102.174201.55970HepG2RPLP0
VPS28ENSG00000160948.9433.53420212.712701.027104.305203.13220HepG2RPS10
VPS28ENSG00000160948.9314.44330225.208600.481402.333001.76360HepG2RPS19
VPS28ENSG00000160948.9477.66230284.525800.747303.639302.72590HepG2RPS2
VPS28ENSG00000160948.9381.89060196.694000.9571010.623509.48740HepG2SAFB2
VPS28ENSG00000160948.9617.31160446.477200.467302.647101.98790HepG2SF3A3
VPS28ENSG00000160948.9701.28000547.558000.356902.557801.98510HepG2SF3B4
VPS28ENSG00000160948.9500.61430382.014800.390002.904302.18650HepG2SLBP
VPS28ENSG00000160948.9334.83180229.380500.545603.834003.09690HepG2SMN1
VPS28ENSG00000160948.9375.22700221.267600.761903.369202.30060HepG2SMNDC1
VPS28ENSG00000160948.9593.57680393.386300.593406.262105.37380HepG2SRSF5
VPS28ENSG00000160948.9409.43150300.988400.443803.058802.33310HepG2SRSF7
VPS28ENSG00000160948.9374.12020465.02600-0.313801.889301.41710HepG2SRSF9
VPS28ENSG00000160948.9937.43700632.544200.567508.158707.36740HepG2SSB
VPS28ENSG00000160948.9732.78850447.403000.7117010.231609.16260HepG2SUCLG1
VPS28ENSG00000160948.9217.92860513.83430-1.2374013.9242012.80910HepG2TAF15
VPS28ENSG00000160948.9397.69990214.622500.889805.832705.15790HepG2TIAL1
VPS28ENSG00000160948.9335.11660216.532500.630004.999704.28660HepG2TRIM56
VPS28ENSG00000160948.9541.11530389.237800.475202.334601.53870HepG2TUFM
VPS28ENSG00000160948.9714.41690411.987100.794102.339601.57470HepG2UBE2L3
VPS28ENSG00000160948.9323.51190179.033700.853503.532302.67820HepG2UCHL5
VPS28ENSG00000160948.9507.97340315.983400.684803.488302.24740HepG2XPO5
VPS28ENSG00000160948.9579.98280298.423200.958605.138604.15870HepG2XRN2
VPS28ENSG00000160948.9402.60850279.443100.526704.128803.33320HepG2ZC3H8
VPS28ENSG00000160948.9549.81930435.477000.336302.697902.15610HepG2ZNF622
VPS28ENSG00000160948.92049.982601296.508300.6609016.7144015.44340K562AGGF1
VPS28ENSG00000160948.91067.65600867.841900.298802.893701.35170K562AKAP1
VPS28ENSG00000160948.91932.267401424.733800.439503.045502.00050K562AKAP8
VPS28ENSG00000160948.91938.287201349.092100.522703.091402.39990K562AKAP8L
VPS28ENSG00000160948.91798.538901415.553600.345403.836602.74600K562ATP5C1
VPS28ENSG00000160948.9482.98510367.511600.394102.353301.62400K562CPSF6
VPS28ENSG00000160948.91209.64760879.372600.459904.918803.47420K562DDX3X
VPS28ENSG00000160948.91201.35060939.000300.355401.951001.38590K562DDX47
VPS28ENSG00000160948.91145.26620891.576200.361203.834502.22100K562DDX6
VPS28ENSG00000160948.9867.91720590.130300.556403.344601.93110K562EEF2
VPS28ENSG00000160948.91180.24040965.952600.289002.965001.70490K562EIF2S1
VPS28ENSG00000160948.91142.01390824.215200.470404.958704.03590K562EIF2S2
VPS28ENSG00000160948.9540.12490360.229700.584305.007803.95220K562EIF3G
VPS28ENSG00000160948.91083.30350827.389900.388704.152202.68680K562EIF4B
VPS28ENSG00000160948.91084.10890801.976500.434804.595402.86050K562EWSR1
VPS28ENSG00000160948.9685.60050451.085300.603905.339204.13400K562FIP1L1
VPS28ENSG00000160948.9715.10100955.45480-0.418004.380603.64340K562FXR1
VPS28ENSG00000160948.980.49980313.40510-1.9610013.6368011.80920K562G3BP2
VPS28ENSG00000160948.9488.17480350.871800.476402.966202.14420K562GPKOW
VPS28ENSG00000160948.91527.641901098.179100.476104.066003.15200K562GRSF1
VPS28ENSG00000160948.9426.85270670.44770-0.651402.456401.89010K562HNRNPC
VPS28ENSG00000160948.9497.47650371.051000.422902.169901.34980K562HNRNPM
VPS28ENSG00000160948.91051.06450611.538300.781209.421507.97340K562HSPD1
VPS28ENSG00000160948.91168.54640613.432600.929603.100501.99410K562IGF2BP2
VPS28ENSG00000160948.91716.501501431.666000.261702.303101.55930K562KIF1C
VPS28ENSG00000160948.91752.034701370.503600.354203.614302.33150K562MAK16
VPS28ENSG00000160948.91605.31650878.488700.869704.987103.54690K562PABPN1
VPS28ENSG00000160948.9540.01470676.07320-0.324202.210001.49430K562POLR2G
VPS28ENSG00000160948.9852.48150512.109800.735105.178203.99940K562PPIG
VPS28ENSG00000160948.9729.86160554.731300.395702.204301.53100K562PRPF8
VPS28ENSG00000160948.9890.47650601.205300.566604.202603.05370K562PSIP1
VPS28ENSG00000160948.91385.492901802.71380-0.379803.038601.91740K562PUM1
VPS28ENSG00000160948.92134.958501337.811100.674207.137206.31110K562PUS1
VPS28ENSG00000160948.9526.78210350.525400.587605.194102.63610K562QKI
VPS28ENSG00000160948.91951.064301303.593300.581706.448605.56980K562RBM15
VPS28ENSG00000160948.9492.46290325.711200.596305.061703.88630K562SF3B4
VPS28ENSG00000160948.91027.74530579.686700.8260010.789808.56200K562SRSF5
VPS28ENSG00000160948.91137.94470620.927000.873804.368803.47260K562TARDBP
VPS28ENSG00000160948.91045.53880598.986900.803605.049803.89210K562TIA1
VPS28ENSG00000160948.91004.03640588.078600.771607.590305.55850K562TRA2A
VPS28ENSG00000160948.9216.64520313.61150-0.533603.187902.32740K562U2AF2
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for VPS28 is not available on ENCORE database.





34 RBPs can affect the splicing of VPS28 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEVPS28ENSG00000160948.9chr8-145651408145651488145651065145651155145651562145651591-0.061000.003380.09159excludedK562PRPF8
A3SSVPS28ENSG00000160948.9chr8-1456522911456526741456522911456523621456538711456539270.457000.000000.00000longerK562AQR
A3SSVPS28ENSG00000160948.9chr8-1456513041456514881456513041456514461456515621456516190.081000.000000.00000longerK562AQR
A3SSVPS28ENSG00000160948.9chr8-1456510431456512001456510431456511551456514081456514460.067000.000010.00007longerK562AQR
A3SSVPS28ENSG00000160948.9chr8-145650328145650434145650328145650423145651065145651167-0.086000.000150.00127shorterK562AQR
A3SSVPS28ENSG00000160948.9chr8-1456522911456526741456522911456523621456538711456539270.247000.000820.04180longerK562PUS1
A3SSVPS28ENSG00000160948.9chr8-1456495971456497901456495971456496511456501001456502020.085000.001600.05863longerHepG2U2AF1
A3SSVPS28ENSG00000160948.9chr8-145650328145650434145650328145650423145651065145651155-0.074000.000820.09264shorterHepG2PCBP1
A5SSVPS28ENSG00000160948.9chr8-1456512571456514461456514081456514461456510431456511550.063000.000000.00000longerK562AQR
RIVPS28ENSG00000160948.9chr8-1456503281456511551456503281456504341456510651456511550.168000.000020.00057includedK562SF3B4
RIVPS28ENSG00000160948.9chr8-1456501001456511551456501001456502021456503281456511550.080000.000000.00006includedK562PUS1
RIVPS28ENSG00000160948.9chr8-1456510651456515911456510651456511551456514081456515910.069000.000000.00001includedK562PUS1
RIVPS28ENSG00000160948.9chr8-1456489991456495151456489991456493051456494231456495150.103000.007640.04451includedK562PUS1
RIVPS28ENSG00000160948.9chr8-1456503281456511551456503281456504341456510651456511550.180000.001660.02050includedHepG2SF3A3
RIVPS28ENSG00000160948.9chr8-1456510651456515911456510651456511551456514081456515910.144000.000000.00004includedHepG2SF3A3
RIVPS28ENSG00000160948.9chr8-1456501001456511551456501001456502021456503281456511550.089000.000350.00570includedHepG2SF3A3
RIVPS28ENSG00000160948.9chr8-1456489991456495151456489991456493051456494231456495150.311000.004660.08069includedK562HNRNPC
RIVPS28ENSG00000160948.9chr8-1456489991456495151456489991456493051456494231456495150.249000.000000.00000includedK562HNRNPU
RIVPS28ENSG00000160948.9chr8-1456495971456502021456495971456496511456501001456502020.068000.000620.05180includedK562HNRNPU
RIVPS28ENSG00000160948.9chr8-145650100145651155145650100145650202145650328145651155-0.110000.000040.00326excludedK562SF3B1
RIVPS28ENSG00000160948.9chr8-1456510651456515911456510651456511551456514081456515910.123000.000000.00001includedHepG2U2AF2
RIVPS28ENSG00000160948.9chr8-1456489991456495151456489991456493051456494231456495150.446000.006290.04113includedHepG2U2AF2
RIVPS28ENSG00000160948.9chr8-1456514081456515911456514081456514461456515621456515910.069000.002490.01940includedHepG2U2AF2
RIVPS28ENSG00000160948.9chr8-1456501001456511551456501001456502021456503281456511550.152000.004990.03421includedHepG2U2AF2
RIVPS28ENSG00000160948.9chr8-1456503281456511551456503281456504341456510651456511550.199000.000070.00158includedHepG2PRPF8
RIVPS28ENSG00000160948.9chr8-1456510651456515911456510651456511551456514081456515910.109000.000840.01281includedHepG2PRPF8
RIVPS28ENSG00000160948.9chr8-1456514081456515911456514081456514461456515621456515910.085000.000000.00010includedHepG2PRPF8
RIVPS28ENSG00000160948.9chr8-1456495971456502021456495971456496511456501001456502020.151000.000020.00877includedHepG2XPO5
RIVPS28ENSG00000160948.9chr8-1456501001456511551456501001456502021456503281456511550.068000.000420.08060includedK562LARP7
RIVPS28ENSG00000160948.9chr8-1456501001456511551456501001456502021456503281456511550.082000.003390.03944includedK562PRPF8
RIVPS28ENSG00000160948.9chr8-1456503281456511551456503281456504341456510651456511550.149000.000010.00017includedK562PRPF8
RIVPS28ENSG00000160948.9chr8-1456510651456515911456510651456511551456514081456515910.127000.000000.00000includedK562PRPF8
RIVPS28ENSG00000160948.9chr8-1456514081456515911456514081456514461456515621456515910.056000.000000.00013includedK562PRPF8
RIVPS28ENSG00000160948.9chr8-1456495971456502021456495971456496511456501001456502020.177000.000000.00000includedK562PRPF8
RIVPS28ENSG00000160948.9chr8-1456489991456495151456489991456493051456494231456495150.305000.000560.00900includedK562PRPF8
RIVPS28ENSG00000160948.9chr8-1456503281456511551456503281456504341456510651456511550.098000.004650.05176includedHepG2PCBP1
RIVPS28ENSG00000160948.9chr8-1456489991456495151456489991456493051456494231456495150.655000.000000.00000includedHepG2PCBP1
RIVPS28ENSG00000160948.9chr8-1456514081456515911456514081456514461456515621456515910.102000.000000.00000includedHepG2PCBP1
RIVPS28ENSG00000160948.9chr8-1456495971456502021456495971456496511456501001456502020.172000.000000.00004includedHepG2PCBP1
RIVPS28ENSG00000160948.9chr8-145650328145651155145650328145650423145651065145651155-0.101000.002750.03537excludedHepG2PCBP1
RIVPS28ENSG00000160948.9chr8-1456503281456511551456503281456504341456510651456511550.103000.000720.01874includedK562RBM22
RIVPS28ENSG00000160948.9chr8-1456495971456502021456495971456496511456501001456502020.082000.003550.06422includedK562RBM22
RIVPS28ENSG00000160948.9chr8-1456510651456515911456510651456511551456514081456515910.056000.000110.00166includedK562AKAP8L
RIVPS28ENSG00000160948.9chr8-1456489991456495151456489991456493051456494231456495150.301000.001720.01824includedHepG2U2AF1
RIVPS28ENSG00000160948.9chr8-1456495971456502021456495971456496511456501001456502020.185000.000000.00001includedHepG2U2AF1
RIVPS28ENSG00000160948.9chr8-1456501001456511551456501001456502021456503281456511550.089000.013510.09932includedHepG2U2AF1
RIVPS28ENSG00000160948.9chr8-1456510651456515911456510651456511551456514081456515910.067000.000000.00009includedK562RBM15
RIVPS28ENSG00000160948.9chr8-1456510651456515911456510651456511551456514081456515910.090000.000640.01447includedHepG2TIAL1
RIVPS28ENSG00000160948.9chr8-145650328145651155145650328145650434145651065145651155-0.173000.000310.02313excludedK562SBDS
RIVPS28ENSG00000160948.9chr8-1456503281456511551456503281456504341456510651456511550.081000.000990.01424includedHepG2NCBP2
RIVPS28ENSG00000160948.9chr8-1456503281456511551456503281456504341456510651456511550.167000.000000.00000includedHepG2SF3B4
RIVPS28ENSG00000160948.9chr8-1456489991456495151456489991456493051456494231456495150.184000.000440.00468includedHepG2SF3B4
RIVPS28ENSG00000160948.9chr8-1456514081456515911456514081456514461456515621456515910.063000.000010.00013includedHepG2SF3B4
RIVPS28ENSG00000160948.9chr8-1456495971456502021456495971456496511456501001456502020.182000.000000.00000includedHepG2SF3B4
RIVPS28ENSG00000160948.9chr8-1456501001456511551456501001456502021456503281456511550.055000.007700.04991includedHepG2SF3B4
RIVPS28ENSG00000160948.9chr8-1456503281456511551456503281456504341456510651456511550.148000.002200.03732includedHepG2FUBP3
RIVPS28ENSG00000160948.9chr8-1456510651456515911456510651456511551456514081456515910.061000.003610.03526includedHepG2RBM22
RIVPS28ENSG00000160948.9chr8-1456495971456502021456495971456496511456501001456502020.139000.000240.00395includedHepG2RBM22
RIVPS28ENSG00000160948.9chr8-1456503281456511551456503281456504341456510651456511550.119000.000700.01404includedHepG2SRSF9
RIVPS28ENSG00000160948.9chr8-1456489991456495151456489991456493051456494231456495150.239000.000630.01295includedHepG2SRSF9
RIVPS28ENSG00000160948.9chr8-1456514081456515911456514081456514461456515621456515910.051000.000230.00619includedHepG2SRSF9
RIVPS28ENSG00000160948.9chr8-1456501001456511551456501001456502021456503281456511550.064000.006500.07881includedHepG2SRSF9
RIVPS28ENSG00000160948.9chr8-1456503281456511551456503281456504341456510651456511550.141000.000300.00498includedHepG2HNRNPK
RIVPS28ENSG00000160948.9chr8-1456510651456515911456510651456511551456514081456515910.072000.000400.00631includedHepG2HNRNPK
RIVPS28ENSG00000160948.9chr8-1456489991456495151456489991456493051456494231456495150.232000.005830.05553includedHepG2HNRNPK
RIVPS28ENSG00000160948.9chr8-1456495971456502021456495971456496511456501001456502020.097000.000770.02060includedHepG2PTBP1
RIVPS28ENSG00000160948.9chr8-1456501001456511551456501001456502021456503281456511550.064000.002760.05628includedHepG2PTBP1
RIVPS28ENSG00000160948.9chr8-1456510651456515911456510651456511551456514081456515910.053000.000300.00526includedK562UTP18
RIVPS28ENSG00000160948.9chr8-1456501001456511551456501001456502021456503281456511550.153000.000000.00002includedK562EFTUD2
RIVPS28ENSG00000160948.9chr8-1456503281456511551456503281456504341456510651456511550.300000.000000.00000includedK562EFTUD2
RIVPS28ENSG00000160948.9chr8-1456510651456515911456510651456511551456514081456515910.173000.000000.00000includedK562EFTUD2
RIVPS28ENSG00000160948.9chr8-1456489991456495151456489991456493051456494231456495150.296000.006900.05995includedK562EFTUD2
RIVPS28ENSG00000160948.9chr8-1456514081456515911456514081456514461456515621456515910.085000.000000.00000includedK562EFTUD2
RIVPS28ENSG00000160948.9chr8-1456495971456502021456495971456496511456501001456502020.169000.000000.00000includedK562EFTUD2
RIVPS28ENSG00000160948.9chr8-1456501001456511551456501001456502021456503281456511550.085000.000150.02542includedHepG2SRSF7
RIVPS28ENSG00000160948.9chr8-145650100145651155145650100145650202145650328145651155-0.230000.000780.05639excludedK562FXR2
RIVPS28ENSG00000160948.9chr8-145649597145650202145649597145649651145650100145650202-0.054000.000060.01619excludedK562PUM1
RIVPS28ENSG00000160948.9chr8-145650100145651155145650100145650202145650328145651155-0.108000.000000.00071excludedK562FMR1
RIVPS28ENSG00000160948.9chr8-1456503281456511551456503281456503831456510651456511550.148000.000290.08177includedK562ABCF1
RIVPS28ENSG00000160948.9chr8-1456489991456495151456489991456493051456494231456495150.222000.000000.00003includedK562AQR
RIVPS28ENSG00000160948.9chr8-1456503281456511551456503281456504341456510651456511550.257000.000000.00000includedK562AQR
RIVPS28ENSG00000160948.9chr8-1456510651456515911456510651456511551456514081456515910.150000.000000.00000includedK562AQR
RIVPS28ENSG00000160948.9chr8-1456514081456516191456514081456514461456515621456516190.081000.000000.00000includedK562AQR
RIVPS28ENSG00000160948.9chr8-1456495971456502021456495971456496511456501001456502020.160000.000000.00000includedK562AQR
RIVPS28ENSG00000160948.9chr8-1456501001456511551456501001456502021456503281456511550.103000.000200.00153includedK562AQR
RIVPS28ENSG00000160948.9chr8-145650328145651155145650328145650423145651065145651155-0.061000.014670.07525excludedK562AQR
RIVPS28ENSG00000160948.9chr8-1456503281456511551456503281456504231456510651456511550.139000.000810.04324includedHepG2LARP4
RIVPS28ENSG00000160948.9chr8-1456495971456502021456495971456496511456501001456502020.089000.000570.03510includedHepG2LARP4
RIVPS28ENSG00000160948.9chr8-1456489991456495151456489991456493051456494231456495150.225000.000760.03057includedK562TARDBP
RIVPS28ENSG00000160948.9chr8-1456503281456511551456503281456504341456510651456511550.138000.000500.02430includedHepG2XRN2
RIVPS28ENSG00000160948.9chr8-1456489991456495151456489991456493051456494231456495150.196000.000440.00978includedK562FXR1
MXEVPS28ENSG00000160948.9chr8-1456501001456502021456503281456504231456495971456496511456510651456511550.071000.000280.002981includedK562AQR

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for VPS28 is not avaliable on ENCORE database.