TBL3

General Information

Gene Name       : TBL3
Gene ID             : ENSG00000183751.14
Essential Gene : Yes

Functions

Localization

Domains (AlphaFold: TBL3)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878TBL3ENSG00000183751.143.5614.749.15ENCSR000AEF
HepG2TBL3ENSG00000183751.1447.738.3228.02ENCSR985KAT
K562TBL3ENSG00000183751.1456.5731.7944.18ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for TBL3 is not avaliable on ENCORE database.



Proteins bound to RNA
  • TBL3 RNA is bound by 13 proteins.  







eCLIP assay for TBL3 is not avaliable on ENCORE database.





13 proteins are bound to TBL3 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr1620245462024583+3'-UTR,CDS3.354963.32039HepG2PPIG
chr1620286782028686+3'-UTR,CDS4.5523213.37518K562EXOSC5
chr1620243942024424+3'-UTR,CDS3.935465.24452HepG2PPIG
chr1620292132029269+3'-UTR4.031843.79474HepG2FAM120A
chr1620292072029282+3'-UTR3.047363.00463HepG2NKRF
chr1620243662024425+3'-UTR,CDS,intron-Proximal3.656486.34662HepG2PRPF8
chr1620243552024429+3'-UTR,CDS,intron-Proximal4.934277.21143HepG2EFTUD2
chr1620243572024430+3'-UTR,CDS,intron-Proximal4.130028.36737K562EFTUD2
chr1620286862028698+3'-UTR4.5523213.37518K562EXOSC5
chr1620286902028699+3'-UTR6.4190218.27189K562RPS3
chr1620296522029727+3'-UTR3.710384.92762HepG2CSTF2T
chr1620293172029381+3'-UTR3.408794.35339HepG2CSTF2T
chr1620301692030233+3'-UTR4.506625.16036HepG2CSTF2T
chr1620289702029002+3'-UTR3.974413.69819HepG2CSTF2T
chr1620292002029289+3'-UTR4.784684.19473HepG2FKBP4
chr1620290562029104+3'-UTR4.235413.13028HepG2FAM120A
chr1620286822028690+3'-UTR,CDS6.4190218.27189K562RPS3
chr1620220732022133+5'-UTR4.702239.05620HepG2SUB1
chr1620262882026395+CDS,intron-Distal,intron-Proximal3.831587.26133HepG2PRPF8
chr1620274002027453+CDS,intron-Proximal3.340876.29405HepG2PRPF8
chr1620281482028188+CDS,intron-Proximal5.051127.65840HepG2PPIG
chr1620253422025398+CDS,intron-Proximal5.200548.55457HepG2PPIG
chr1620241342024199+CDS,intron-Proximal4.223137.52362K562EFTUD2
chr1620274712027530+CDS,intron-Proximal5.500815.58842K562EFTUD2
chr1620273782027427+CDS3.903394.96634HepG2PPIG
chr1620276972027775+CDS,intron-Proximal4.104394.69223K562SF3B4
chr1620276912027787+CDS,intron-Proximal4.204875.84589K562EFTUD2
chr1620274522027535+CDS,intron-Proximal3.282073.74472K562PRPF8
chr1620260902026174+CDS,intron-Proximal3.442066.25527HepG2PRPF8
chr1620252152025263+CDS4.313738.09084HepG2PPIG
chr1620252052025263+CDS3.786285.57640K562YBX3
chr1620286752028682+CDS5.8182017.35000K562RPS3
chr1620260732026118+CDS,intron-Proximal4.575514.38106HepG2PPIG
chr1620267062026802+intron-Distal,intron-Proximal3.335783.37120HepG2SF3B4
chr1620263402026427+intron-Distal,intron-Proximal5.851839.67979K562EFTUD2
chr1620263232026400+intron-Distal,intron-Proximal3.364643.50696K562BUD13
chr1620263412026449+intron-Distal,intron-Proximal4.958408.42614HepG2EFTUD2
chr1620243122024366+intron-Proximal4.772485.68502HepG2PRPF8
chr1620254472025524+intron-Proximal3.791884.75435K562EFTUD2
chr1620278992027950+intron-Proximal5.069205.40008K562SF3B4
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for TBL3 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for TBL3 is not available on ENCORE database.

  • 99 RBPs can affect the levels of TBL3.  








The Knockdown/knockout RNA-Seq assay for TBL3 is not available on ENCORE database.





99 RBPs can affect the gene expression of TBL3 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
TBL3ENSG00000183751.10165.28970297.20280-0.846504.326801.35470HepG2AGGF1
TBL3ENSG00000183751.10832.38460550.814000.595602.324001.83200HepG2AKAP1
TBL3ENSG00000183751.10167.37100251.45150-0.587202.712801.94850HepG2CALR
TBL3ENSG00000183751.10350.38790212.407100.722003.261202.42510HepG2CNOT7
TBL3ENSG00000183751.10218.58230298.54260-0.449801.947301.35960HepG2CPSF6
TBL3ENSG00000183751.10473.16180271.622900.800608.323507.32170HepG2CELF1
TBL3ENSG00000183751.10410.27450292.036100.490303.960703.09910HepG2DAZAP1
TBL3ENSG00000183751.10298.70410143.592601.0566011.024109.82030HepG2DNAJC2
TBL3ENSG00000183751.10295.11370424.57470-0.524703.418302.54830HepG2FUBP3
TBL3ENSG00000183751.10365.44740179.874801.022606.975704.73230HepG2HNRNPA0
TBL3ENSG00000183751.10340.92680175.622700.956906.428504.19890HepG2HNRNPAB
TBL3ENSG00000183751.10454.87730338.258100.427303.333702.55220HepG2HNRNPF
TBL3ENSG00000183751.10738.51660456.740300.693204.625803.74170HepG2HNRNPK
TBL3ENSG00000183751.10515.15610266.015000.9534014.0945012.68460HepG2HNRNPL
TBL3ENSG00000183751.10233.13570322.92500-0.470002.024501.47750HepG2HNRNPLL
TBL3ENSG00000183751.10322.60040161.592200.997306.072705.20370HepG2HNRNPU
TBL3ENSG00000183751.10244.75090165.059700.568203.572702.74920HepG2ILF2
TBL3ENSG00000183751.10406.20770202.658501.003107.579505.51440HepG2KHDRBS1
TBL3ENSG00000183751.10365.75230205.313000.832903.370802.11950HepG2LARP7
TBL3ENSG00000183751.10777.23560488.806500.669003.958603.21640HepG2MATR3
TBL3ENSG00000183751.10701.74880500.272600.488102.536201.92830HepG2NCBP2
TBL3ENSG00000183751.10542.21980289.583800.9048011.273209.77420HepG2NOL12
TBL3ENSG00000183751.10286.11440165.829100.786803.579001.94470HepG2NOLC1
TBL3ENSG00000183751.10447.57930247.317800.855702.951201.81890HepG2NONO
TBL3ENSG00000183751.10301.77670144.126001.0661010.038708.68430HepG2PPIL4
TBL3ENSG00000183751.10465.18410276.440000.750702.912102.30300HepG2PUF60
TBL3ENSG00000183751.10608.22800293.461401.0513019.6571018.36840HepG2PUM1
TBL3ENSG00000183751.10471.10390293.242000.683903.211202.48830HepG2PUM2
TBL3ENSG00000183751.10467.22480761.63900-0.705004.399603.78580HepG2RBM22
TBL3ENSG00000183751.10613.57940247.598101.3091010.966408.96060HepG2RBM27
TBL3ENSG00000183751.10374.67810228.309200.714602.177201.46230HepG2RPS2
TBL3ENSG00000183751.10350.84830213.542900.716203.150002.29730HepG2RPS3A
TBL3ENSG00000183751.10416.96980233.099300.838902.864801.76980HepG2RPS5
TBL3ENSG00000183751.10318.66220143.900401.146904.248903.48040HepG2SAFB2
TBL3ENSG00000183751.10427.27360201.080801.087307.951005.81630HepG2SART3
TBL3ENSG00000183751.10233.22650319.60750-0.454601.940201.34270HepG2SF3B1
TBL3ENSG00000183751.10464.44360265.079600.809004.987104.08800HepG2SLBP
TBL3ENSG00000183751.10293.14910167.804300.804805.774404.89890HepG2SMN1
TBL3ENSG00000183751.10430.65520188.055301.195304.864803.56020HepG2SMNDC1
TBL3ENSG00000183751.10243.22230355.62810-0.548102.193101.50160HepG2SNRNP70
TBL3ENSG00000183751.10302.45260502.92920-0.733607.127406.45150HepG2SRSF1
TBL3ENSG00000183751.10583.22620272.954001.0953017.9534016.55260HepG2SRSF5
TBL3ENSG00000183751.10260.20770409.18400-0.653105.799005.05160HepG2SRSF9
TBL3ENSG00000183751.10536.75230746.79370-0.476503.236102.69160HepG2SSB
TBL3ENSG00000183751.10404.31970185.845801.121305.932704.27060HepG2STIP1
TBL3ENSG00000183751.10649.13030310.415601.0642019.3421017.93470HepG2SUCLG1
TBL3ENSG00000183751.10189.42960452.13070-1.2551011.3031010.29190HepG2TAF15
TBL3ENSG00000183751.10220.08260156.987500.487302.060301.61560HepG2TIAL1
TBL3ENSG00000183751.10361.38930158.422501.189705.969905.19750HepG2TRIM56
TBL3ENSG00000183751.10508.88660270.083500.913805.882004.54340HepG2TUFM
TBL3ENSG00000183751.10273.91310415.29200-0.600402.157001.59580HepG2U2AF1
TBL3ENSG00000183751.10372.38980158.157601.235408.624307.28220HepG2UCHL5
TBL3ENSG00000183751.10389.83660191.285001.027005.043403.54740HepG2XPO5
TBL3ENSG00000183751.10238.91100354.73000-0.570204.239003.43530HepG2ZC3H8
TBL3ENSG00000183751.101420.77520941.742400.5932011.2329010.18390K562AGGF1
TBL3ENSG00000183751.101129.52160903.765100.321603.244701.58980K562AKAP1
TBL3ENSG00000183751.101299.44270979.935100.407002.204301.61960K562AKAP8L
TBL3ENSG00000183751.101370.142001028.205600.414105.269003.96170K562ATP5C1
TBL3ENSG00000183751.101084.70490681.524000.670402.505601.59460K562BCLAF1
TBL3ENSG00000183751.101746.084301306.448700.418405.818604.16980K562CPEB4
TBL3ENSG00000183751.10901.72560517.038000.802302.787301.72590K562CSTF2
TBL3ENSG00000183751.101801.667602518.36910-0.483207.033405.50150K562CELF1
TBL3ENSG00000183751.101843.932401351.718900.447907.479106.47840K562DDX47
TBL3ENSG00000183751.101390.883401054.421300.399505.224603.96850K562DKC1
TBL3ENSG00000183751.101049.070801254.63680-0.258202.417001.73690K562EIF2S2
TBL3ENSG00000183751.10496.99070229.638801.1138013.9313012.09890K562EIF3G
TBL3ENSG00000183751.101063.24110861.533200.303402.674401.54620K562EIF4B
TBL3ENSG00000183751.10418.94590719.31700-0.779902.874401.72500K562FKBP4
TBL3ENSG00000183751.10293.63080475.24020-0.694705.141703.97040K562FMR1
TBL3ENSG00000183751.10286.51600402.82130-0.491502.512201.64480K562FTO
TBL3ENSG00000183751.101238.66530994.909900.316003.188802.54610K562FXR1
TBL3ENSG00000183751.107.24650111.74810-3.9468020.1303017.73580K562G3BP2
TBL3ENSG00000183751.10690.875901086.88880-0.653704.030602.10830K562HNRNPAB
TBL3ENSG00000183751.10950.37910355.533001.418402.386001.45270K562IGF2BP2
TBL3ENSG00000183751.10603.79430361.479800.740006.311404.39810K562IGF2BP3
TBL3ENSG00000183751.10554.158201059.84590-0.935503.074801.56690K562ILF2
TBL3ENSG00000183751.10231.63930380.77850-0.717103.839202.72670K562KRR1
TBL3ENSG00000183751.10532.658101194.90340-1.165603.743801.31240K562LARP4
TBL3ENSG00000183751.10762.61040373.291501.0305013.5554011.56760K562MAGOH
TBL3ENSG00000183751.10649.43740372.479500.801902.880801.93800K562MATR3
TBL3ENSG00000183751.10613.36420955.32740-0.639304.295802.74870K562NCBP2
TBL3ENSG00000183751.101058.99700583.864700.858903.211901.78880K562NONO
TBL3ENSG00000183751.10781.362301115.89300-0.514102.773301.53780K562PABPC1
TBL3ENSG00000183751.10845.320101024.58640-0.277502.126001.42480K562POLR2G
TBL3ENSG00000183751.101280.97530851.354600.589304.408603.34010K562PPIG
TBL3ENSG00000183751.10990.40030362.703001.4491028.7210026.67320K562PTBP1
TBL3ENSG00000183751.101451.440202376.88620-0.7116015.0911012.56270K562PUM1
TBL3ENSG00000183751.101824.270702328.45570-0.352104.103402.92650K562PUM2
TBL3ENSG00000183751.101356.16050971.759500.480802.710302.17120K562PUS1
TBL3ENSG00000183751.101225.63510946.888900.372204.030403.33120K562RBM15
TBL3ENSG00000183751.10739.64170338.986601.125503.042601.56290K562RBM34
TBL3ENSG00000183751.10649.27470365.831300.827603.367602.14790K562NELFE
TBL3ENSG00000183751.10620.811301035.82440-0.738603.973202.05390K562RPS3A
TBL3ENSG00000183751.101373.15060913.025900.588702.918301.80730K562SAFB
TBL3ENSG00000183751.101224.272001567.24240-0.356302.351401.59400K562SF3A3
TBL3ENSG00000183751.10272.04100424.11480-0.640603.254302.19710K562SF3B1
TBL3ENSG00000183751.10204.67630116.108900.817804.707303.58080K562SF3B4
TBL3ENSG00000183751.10116.49310210.86960-0.856104.694202.45770K562SND1
TBL3ENSG00000183751.10432.72690962.60030-1.153503.711002.20740K562SNRNP200
TBL3ENSG00000183751.10842.40450642.031600.391802.694301.68770K562SRFBP1
TBL3ENSG00000183751.10602.72610355.610200.761103.675602.86650K562SRSF1
TBL3ENSG00000183751.10614.71010372.910000.721004.149102.82340K562SRSF4
TBL3ENSG00000183751.10744.65440335.947001.148209.392007.34030K562SRSF5
TBL3ENSG00000183751.10548.256801151.78190-1.070903.288001.69270K562SUPT6H
TBL3ENSG00000183751.1037.99740109.68640-1.529404.530802.49580K562TAF15
TBL3ENSG00000183751.10823.43400359.813701.1943015.9642013.99430K562TARDBP
TBL3ENSG00000183751.10839.77750347.103801.2745015.2876013.24300K562TIA1
TBL3ENSG00000183751.10768.27910340.818001.172504.382402.95360K562TRA2A
TBL3ENSG00000183751.1039.58200108.21960-1.451004.599903.11810K562U2AF1
TBL3ENSG00000183751.1036.95960111.80020-1.596907.646606.30510K562U2AF2
TBL3ENSG00000183751.101348.804901683.88170-0.320103.355902.56920K562UPF1
TBL3ENSG00000183751.101184.689401440.82560-0.282402.204701.42380K562WDR3
TBL3ENSG00000183751.101124.995501498.42100-0.413503.340402.41850K562WDR43
TBL3ENSG00000183751.101728.774102251.07470-0.380904.060202.48910K562WRN
TBL3ENSG00000183751.10441.20600981.68920-1.153803.218301.30300K562XPO5
TBL3ENSG00000183751.10483.433901133.21610-1.229003.901401.87290K562YTHDC2
TBL3ENSG00000183751.101543.995302140.72460-0.471405.498304.21370K562ZC3H8
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for TBL3 is not available on ENCORE database.





4 RBPs can affect the splicing of TBL3 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SETBL3ENSG00000183751.10chr16+202534520254392025187202526320258082025950-0.091000.000740.00947excludedK562AQR
RITBL3ENSG00000183751.10chr16+2024056202429320240562024108202419720242930.251000.006640.06733includedK562PRPF8
RITBL3ENSG00000183751.10chr16+2024241202442420242412024293202437620244240.092000.005630.05936includedK562PRPF8
RITBL3ENSG00000183751.10chr16+2024056202429320240562024108202419720242930.290000.000460.00667includedHepG2RBM22
RITBL3ENSG00000183751.10chr16+2024056202429320240562024108202419720242930.327000.000180.00291includedK562EFTUD2
RITBL3ENSG00000183751.10chr16+2024056202429320240562024108202419720242930.349000.000000.00000includedK562AQR
RITBL3ENSG00000183751.10chr16+2027536202776920275362027671202774220277690.202000.000000.00000includedK562AQR
RITBL3ENSG00000183751.10chr16+2024241202442420242412024293202437620244240.221000.000000.00000includedK562AQR

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for TBL3 is not avaliable on ENCORE database.