TATDN2

General Information

Gene Name       : TATDN2
Gene ID             : ENSG00000157014.10
Essential Gene : No

Functions

Localization

Domains (AlphaFold: TATDN2)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878TATDN2ENSG00000157014.1017.2519.1218.19ENCSR000AEF
HepG2TATDN2ENSG00000157014.1025.5226.1925.86ENCSR985KAT
K562TATDN2ENSG00000157014.1025.2424.6124.92ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for TATDN2 is not avaliable on ENCORE database.



Proteins bound to RNA
  • TATDN2 RNA is bound by 25 proteins.  







eCLIP assay for TATDN2 is not avaliable on ENCORE database.





25 proteins are bound to TATDN2 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr31032106410321138+3'-UTR,intron-Distal5.545378.80636K562UPF1
chr31032071310320795+3'-UTR,intron-Proximal5.173337.02967HepG2PRPF8
chr31032106410321113+3'-UTR,intron-Distal4.255783.71613K562UCHL5
chr31032103810321108+3'-UTR,intron-Distal4.396058.32409HepG2GTF2F1
chr31032076710320827+3'-UTR,intron-Distal,intron-Proximal4.2229810.17772K562KHSRP
chr31032106210321165+3'-UTR,intron-Distal4.826093.75892K562FTO
chr31032105910321140+3'-UTR,intron-Distal4.4176610.83333K562DDX6
chr31032104510321118+3'-UTR,intron-Distal3.030876.22789HepG2PCBP2
chr31032105510321130+3'-UTR,intron-Distal3.558089.44681HepG2FAM120A
chr31032065410320741+3'-UTR,CDS,intron-Proximal4.258469.28811HepG2GRWD1
chr31032071310320740+3'-UTR,intron-Proximal3.313733.32039HepG2PPIG
chr31032088710320941+3'-UTR,intron-Distal,intron-Proximal4.7924613.77663K562U2AF2
chr31032109910321111+3'-UTR,intron-Distal3.437225.40996HepG2PRPF4
chr31032088810320939+3'-UTR,intron-Distal,intron-Proximal5.219206.47105K562U2AF1
chr31032088410320914+3'-UTR,intron-Distal,intron-Proximal5.3411253.20007HepG2U2AF2
chr31032111110321139+3'-UTR,intron-Distal3.625107.70534HepG2PRPF4
chr31032091410320946+3'-UTR,intron-Distal5.0724453.17210HepG2U2AF2
chr31032105210321147+3'-UTR,intron-Distal4.1176012.40118K562GTF2F1
chr31032106010321099+3'-UTR,intron-Distal3.9728513.80024HepG2PRPF4
chr31032088510320943+3'-UTR,intron-Distal,intron-Proximal3.9503813.93241HepG2U2AF1
chr31032178310321840+3'-UTR,intron-Distal3.336635.13860K562PUM2
chr31032082710320873+3'-UTR,intron-Distal,intron-Proximal,polyA_site3.252834.52210K562KHSRP
chr31029030110290359+5'-UTR3.9648611.34202HepG2DDX3X
chr31029037710290461+5'-UTR3.145424.40348HepG2EIF3H
chr31029031510290390+5'-UTR3.976634.66602K562DDX3X
chr31029072210290749+5'-UTR3.565265.31167HepG2GRWD1
chr31029087810290907+5'-UTR,CDS,intron-Proximal3.950303.36385K562UCHL5
chr31029035910290478+5'-UTR4.0917320.32999HepG2DDX3X
chr31029021710290301+5'-UTR3.8304521.29103HepG2DDX3X
chr31031990510319993+3'-UTR,CDS,intron-Proximal4.085748.01283HepG2SF3A3
chr31029114410291193+CDS3.864374.80676K562RBM15
chr31030221110302288+5'-UTR,CDS3.934496.84754HepG2GRWD1
chr31029125910291338+CDS,intron-Proximal4.809848.11807HepG2PRPF8
chr31032011110320147+3'-UTR,CDS,intron-Proximal4.173688.06490HepG2PPIG
chr31032010610320147+3'-UTR,CDS,intron-Proximal3.583534.93175HepG2GRWD1
chr31029111610291192+CDS5.072345.97170HepG2RBM15
chr31031255910312677+3'-UTR,CDS5.6910712.14650K562RBM15
chr31031184710311883+3'-UTR,CDS3.904303.79347HepG2GRWD1
chr31029091810290991+CDS3.189093.97151HepG2EIF3H
chr31031265810312692+3'-UTR,CDS4.033764.28220HepG2GRWD1
chr31031814710318199+3'-UTR,CDS,intron-Proximal4.229627.09561HepG2BCLAF1
chr31031241710312472+3'-UTR,CDS4.352594.70436K562RBM15
chr31032006110320088+3'-UTR,CDS3.756573.14999HepG2GRWD1
chr31030206010302098+5'-UTR,CDS3.530343.68471HepG2BCLAF1
chr31030198210302125+5'-UTR,CDS3.296583.41227K562UCHL5
chr31031810910318180+3'-UTR,CDS,intron-Proximal3.520763.85127HepG2GRWD1
chr31030208710302178+5'-UTR,CDS4.876018.08487HepG2GRWD1
chr31031997210320013+3'-UTR,CDS3.593114.09885HepG2BCLAF1
chr31030385410303895+intron-Distal4.153053.79098HepG2SUGP2
chr31030374210303780+intron-Distal3.885023.39864HepG2SUGP2
chr31030349610303567+intron-Distal3.214503.10640HepG2SUGP2
chr31030596910306018+intron-Distal3.957213.63454HepG2SUGP2
chr31032034810320375+3'-UTR,CDS,intron-Distal3.236684.24993HepG2PPIG
chr31029670110296769+intron-Distal4.038313.57189K562ILF3
chr31030760410307743+intron-Distal4.522015.37222HepG2MATR3
chr31029665110296762+intron-Distal3.999447.47988HepG2PCBP2
chr31030508210305139+intron-Distal3.993576.24904HepG2PTBP1
chr31030572210305762+intron-Distal4.431734.05620HepG2MATR3
chr31029587210295989+intron-Distal5.086464.96472K562LSM11
chr31030564910305717+intron-Distal3.487414.46039HepG2MATR3
chr31030545510305525+intron-Distal3.727016.23177HepG2SUGP2
chr31030562910305697+intron-Distal4.497304.78128HepG2SUGP2
chr31029855210298709+intron-Distal3.686413.15816HepG2PRPF4
chr31030508410305144+intron-Distal5.517056.90462K562PTBP1
chr31030535910305454+intron-Distal3.647225.12973HepG2MATR3
chr31030765410307769+intron-Distal4.101503.79098HepG2SUGP2
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for TATDN2 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for TATDN2 is not available on ENCORE database.

  • 83 RBPs can affect the levels of TATDN2.  








The Knockdown/knockout RNA-Seq assay for TATDN2 is not available on ENCORE database.





83 RBPs can affect the gene expression of TATDN2 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
TATDN2ENSG00000157014.6847.905301153.48520-0.444006.621405.76270HepG2ACO1
TATDN2ENSG00000157014.6916.539201871.34230-1.0298013.6552012.56590HepG2AKAP1
TATDN2ENSG00000157014.6578.43580810.20890-0.486102.957001.88520HepG2AKAP8
TATDN2ENSG00000157014.6880.192501158.91530-0.396904.998903.99450HepG2AKAP8L
TATDN2ENSG00000157014.61159.845001548.39480-0.416803.189402.34570HepG2ASCC1
TATDN2ENSG00000157014.61229.003001478.95330-0.267102.908302.20680HepG2AUH
TATDN2ENSG00000157014.6773.51460421.246000.876704.717603.96220HepG2BOP1
TATDN2ENSG00000157014.6476.03200637.23680-0.420803.084302.27310HepG2CALR
TATDN2ENSG00000157014.6571.31240881.81190-0.626204.275103.05050HepG2CCAR1
TATDN2ENSG00000157014.6476.83960832.07590-0.803205.270504.21210HepG2CNOT7
TATDN2ENSG00000157014.6510.86750730.91380-0.516804.669303.26120HepG2CPSF7
TATDN2ENSG00000157014.6413.55370598.95890-0.534404.028602.75720HepG2CSTF2
TATDN2ENSG00000157014.61356.465001066.814500.346404.999203.92270HepG2DDX19B
TATDN2ENSG00000157014.61209.59660925.532600.386103.271202.53680HepG2DDX21
TATDN2ENSG00000157014.6821.465301539.83220-0.9065010.643009.51950HepG2DDX6
TATDN2ENSG00000157014.6540.25790772.44450-0.515805.769704.87900HepG2DNAJC2
TATDN2ENSG00000157014.61162.795801480.35930-0.348302.347901.79890HepG2EIF2S1
TATDN2ENSG00000157014.61831.881101435.884000.351304.622103.58180HepG2EIF4G1
TATDN2ENSG00000157014.6568.39880896.37380-0.657204.866403.86950HepG2FIP1L1
TATDN2ENSG00000157014.6622.71360900.60580-0.532305.034803.98670HepG2FUBP3
TATDN2ENSG00000157014.61259.753501650.54700-0.389802.984602.26530HepG2FXR1
TATDN2ENSG00000157014.61002.366501531.18690-0.611205.755804.80950HepG2G3BP1
TATDN2ENSG00000157014.6794.852501550.31940-0.9638015.3748013.86710HepG2HNRNPK
TATDN2ENSG00000157014.61076.454301326.00770-0.300804.171703.35680HepG2HNRNPL
TATDN2ENSG00000157014.6755.564101054.43810-0.480807.669306.03200HepG2KIF1C
TATDN2ENSG00000157014.62212.093501660.383200.413803.058402.39820HepG2MATR3
TATDN2ENSG00000157014.61058.09490725.317200.544705.495404.38950HepG2MSI2
TATDN2ENSG00000157014.61177.428901443.37000-0.293802.980702.18950HepG2NOL12
TATDN2ENSG00000157014.6546.98160875.57150-0.678703.476302.24200HepG2NONO
TATDN2ENSG00000157014.6584.94470860.62670-0.557107.378506.10360HepG2PARN
TATDN2ENSG00000157014.6569.38010980.00560-0.783405.849804.38670HepG2PCBP2
TATDN2ENSG00000157014.6620.07160775.47340-0.322602.627801.90830HepG2PPIL4
TATDN2ENSG00000157014.61216.931501553.71370-0.352504.761704.08640HepG2PTBP1
TATDN2ENSG00000157014.61156.301601462.50120-0.338905.551004.77180HepG2PUM1
TATDN2ENSG00000157014.6937.499201461.47170-0.6405010.245408.99790HepG2PUM2
TATDN2ENSG00000157014.61003.107801174.90140-0.228102.224401.65830HepG2PUS1
TATDN2ENSG00000157014.61248.499201682.85510-0.430705.688004.83920HepG2QKI
TATDN2ENSG00000157014.6710.67540975.24320-0.456603.813702.82580HepG2RBM15
TATDN2ENSG00000157014.61356.490001729.19060-0.350204.880204.19770HepG2NELFE
TATDN2ENSG00000157014.61184.061201610.40360-0.443707.254906.32760HepG2RECQL
TATDN2ENSG00000157014.61583.007101108.226900.514305.199904.30180HepG2RPLP0
TATDN2ENSG00000157014.6629.90230774.28790-0.297702.645402.01270HepG2SAFB2
TATDN2ENSG00000157014.61037.51170413.947401.3255011.9760010.60530HepG2SF3B1
TATDN2ENSG00000157014.6709.37930964.42860-0.443102.459901.56070HepG2SMNDC1
TATDN2ENSG00000157014.61171.988001360.27240-0.214902.118501.56220HepG2SRSF5
TATDN2ENSG00000157014.6984.555001373.65720-0.480508.311807.44690HepG2SRSF9
TATDN2ENSG00000157014.61804.338401391.776700.374406.022805.32140HepG2SSB
TATDN2ENSG00000157014.61335.954901547.06830-0.211702.614102.00590HepG2SUCLG1
TATDN2ENSG00000157014.6682.61870949.12640-0.475503.139902.42390HepG2SUPV3L1
TATDN2ENSG00000157014.6935.138901517.56850-0.6985013.7051012.59660HepG2TAF15
TATDN2ENSG00000157014.6605.31800852.36700-0.493806.407905.61340HepG2TRIM56
TATDN2ENSG00000157014.61204.94960766.704600.652106.860005.88300HepG2U2AF1
TATDN2ENSG00000157014.61308.61380896.707600.545205.539604.60440HepG2UPF1
TATDN2ENSG00000157014.6772.020301040.04670-0.429902.260701.30680HepG2XRCC6
TATDN2ENSG00000157014.6967.19120645.970800.582209.579808.45690HepG2ZC3H8
TATDN2ENSG00000157014.61260.17930919.524400.454602.515401.96960K562AGGF1
TATDN2ENSG00000157014.61326.02520956.789300.470704.452503.61720K562AKAP8L
TATDN2ENSG00000157014.62982.677202115.114000.495805.803205.00690K562AQR
TATDN2ENSG00000157014.61439.515201063.282400.437004.836803.40510K562DDX3X
TATDN2ENSG00000157014.62140.078501457.704200.553909.555508.43070K562DDX47
TATDN2ENSG00000157014.61242.454301029.683500.270902.311601.52080K562DKC1
TATDN2ENSG00000157014.62098.698501391.486600.592805.653204.10300K562EIF3D
TATDN2ENSG00000157014.61347.54560989.145400.446005.854904.71210K562EIF3G
TATDN2ENSG00000157014.61648.922101110.882100.569707.007705.70780K562EIF4A3
TATDN2ENSG00000157014.63652.783002396.026200.6083014.8499012.78070K562EIF4G2
TATDN2ENSG00000157014.6756.495501058.21430-0.484204.503302.41510K562FASTKD2
TATDN2ENSG00000157014.61917.174501155.273100.7306017.0226015.63430K562FXR1
TATDN2ENSG00000157014.6689.14030991.18530-0.524403.365102.57170K562G3BP2
TATDN2ENSG00000157014.61395.69550907.591100.620808.286307.30320K562HNRNPC
TATDN2ENSG00000157014.61365.25800990.558300.462803.226902.21640K562HNRNPM
TATDN2ENSG00000157014.61359.540901667.74160-0.294803.035202.10220K562HNRNPU
TATDN2ENSG00000157014.61796.502401301.870100.464505.533104.33080K562MAGOH
TATDN2ENSG00000157014.61382.609101137.556300.281402.079201.30740K562MBNL1
TATDN2ENSG00000157014.61107.59680797.339200.474102.788401.90060K562NAA15
TATDN2ENSG00000157014.61465.096501158.345300.338802.714501.74450K562PCBP2
TATDN2ENSG00000157014.61184.173601508.36060-0.349102.406101.63130K562PCBP3
TATDN2ENSG00000157014.61656.568401264.603300.389403.276302.45940K562PRPF8
TATDN2ENSG00000157014.61772.939401264.847000.487106.264405.29910K562PTBP1
TATDN2ENSG00000157014.63451.580002614.245100.400804.404703.38150K562PUF60
TATDN2ENSG00000157014.61628.17480948.997700.7787010.442409.43390K562PUS1
TATDN2ENSG00000157014.61179.66130924.551500.351403.258402.62330K562RBM15
TATDN2ENSG00000157014.61760.303501313.393600.422406.199305.01710K562SF3A3
TATDN2ENSG00000157014.61605.303701030.612300.6392010.445708.73190K562SF3B4
TATDN2ENSG00000157014.6680.91850908.26630-0.415603.168401.44890K562SND1
TATDN2ENSG00000157014.6609.60160783.76950-0.362602.433001.45560K562SRSF4
TATDN2ENSG00000157014.61000.387401316.91140-0.396604.114802.24630K562SRSF9
TATDN2ENSG00000157014.61399.816401160.463900.270402.184301.45400K562SYNCRIP
TATDN2ENSG00000157014.6999.587501210.52500-0.276202.093701.38850K562TIA1
TATDN2ENSG00000157014.61250.78480960.728900.380502.459901.43970K562U2AF1
TATDN2ENSG00000157014.61323.20970992.240800.415204.496703.47790K562U2AF2
TATDN2ENSG00000157014.61570.144901255.769300.322204.662203.58680K562WDR43
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for TATDN2 is not available on ENCORE database.





16 RBPs can affect the splicing of TATDN2 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SETATDN2ENSG00000157014.6chr3+103203471032044410319962103201461032056810320718-0.311000.000000.00000excludedK562SF3B4
SETATDN2ENSG00000157014.6chr3+1032034710320444103199621032014610320568103207180.230000.000050.01901includedK562WDR3
SETATDN2ENSG00000157014.6chr3+103203471032044410319962103201461032056810320718-0.170000.000000.00005excludedHepG2U2AF1
SETATDN2ENSG00000157014.6chr3+1032034710320444103199621032014610320568103207180.409000.000000.00000includedHepG2HNRNPK
SETATDN2ENSG00000157014.6chr3+103179361031817210311814103126991031996210320146-0.079000.002750.02847excludedK562AQR
SETATDN2ENSG00000157014.6chr3+103203471032044410319962103201461032056810320718-0.204000.000000.00024excludedK562FXR1
SETATDN2ENSG00000157014.6chr3+1032034710320444103199621032014610320568103207180.188000.000050.01273includedK562NSUN2
SETATDN2ENSG00000157014.6chr3+103203471032044410319962103201461032056810320718-0.129000.000080.02338excludedK562APOBEC3C
SETATDN2ENSG00000157014.6chr3+103203471032044410319962103201461032056810320718-0.199000.000000.00001excludedHepG2MATR3
SETATDN2ENSG00000157014.6chr3+103203471032044410319962103201461032056810320718-0.260000.000010.00042excludedK562U2AF1
SETATDN2ENSG00000157014.6chr3+1032034710320444103199621032014610320568103207180.206000.000460.08090includedK562SBDS
SETATDN2ENSG00000157014.6chr3+103203471032044410319962103201461032056810320718-0.165000.000000.00000excludedHepG2SRSF1
SETATDN2ENSG00000157014.6chr3+103203471032044410319962103201461032056810320718-0.155000.000890.02807excludedHepG2SF3A3
SETATDN2ENSG00000157014.6chr3+1032034710320444103199621032014610320568103207180.153000.000610.08644includedK562SRSF7
SETATDN2ENSG00000157014.6chr3+1032034710320444103199801032014610320568103207180.210000.000000.00156includedK562UPF1
SETATDN2ENSG00000157014.6chr3+103203471032044410319962103201461032056810320718-0.234000.000330.00783excludedK562U2AF2
SETATDN2ENSG00000157014.6chr3+1032034710320444103199621032014610320568103207180.231000.000000.00114includedK562ZC3H8

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for TATDN2 is not avaliable on ENCORE database.