SLC29A4

General Information

Gene Name       : SLC29A4
Gene ID             : ENSG00000164638.10
Essential Gene : No

Functions

Localization

Domains (AlphaFold: SLC29A4)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878SLC29A4ENSG00000164638.100.000.100.05ENCSR000AEF
HepG2SLC29A4ENSG00000164638.1037.1311.8924.51ENCSR985KAT
K562SLC29A4ENSG00000164638.100.790.250.52ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for SLC29A4 is not avaliable on ENCORE database.



Proteins bound to RNA
  • SLC29A4 RNA is bound by 22 proteins.  







eCLIP assay for SLC29A4 is not avaliable on ENCORE database.





22 proteins are bound to SLC29A4 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr753426005342686+3'-UTR,intron-Distal5.980378.16103HepG2PCBP1
chr753425685342711+3'-UTR,intron-Distal4.1598410.66463HepG2UPF1
chr753435945343670+3'-UTR3.271925.94742HepG2PCBP2
chr753429625343032+3'-UTR3.050974.32099HepG2IGF2BP1
chr753428115342882+3'-UTR,intron-Proximal4.511094.13758HepG2AKAP1
chr753426215342734+3'-UTR,intron-Distal4.131053.65412HepG2HNRNPK
chr753429375343032+3'-UTR4.6590811.04592HepG2UPF1
chr753428145342917+3'-UTR,intron-Proximal3.6367310.42537HepG2UPF1
chr753431135343162+3'-UTR3.565003.97153HepG2UPF1
chr753274395327501+3'-UTR,5'-UTR,CDS,intron-Proximal4.2586821.02673HepG2DDX3X
chr753226475322703+5'-UTR,intron-Distal4.650294.68979HepG2UPF1
chr753226165322716+5'-UTR,intron-Distal,intron-Proximal4.3774325.11785HepG2DDX3X
chr753345625334632+CDS,intron-Proximal3.527889.77953HepG2PRPF8
chr753364775336578+CDS,intron-Proximal3.8922618.89378HepG2CSTF2T
chr753402925340304+CDS,intron-Proximal4.617719.33787HepG2AQR
chr753364775336588+CDS,intron-Proximal3.8264113.26510HepG2PRPF8
chr753364815336599+CDS,intron-Proximal3.7978010.37261HepG2AQR
chr753402275340286+CDS3.536335.41979HepG2DDX55
chr753345305334590+CDS,intron-Proximal3.335937.09278HepG2PPIG
chr753356345335710+intron-Distal3.9929914.11127HepG2CSTF2T
chr753230825323155+intron-Distal4.466535.16036HepG2CSTF2T
chr753346405334702+intron-Distal,intron-Proximal5.1122716.56766HepG2CSTF2T
chr753346445334692+intron-Distal,intron-Proximal4.555915.29549HepG2EFTUD2
chr753347125334767+intron-Distal3.285819.57986HepG2CSTF2T
chr753362265336297+intron-Distal4.468125.02240HepG2PRPF4
chr753362585336295+intron-Distal4.094443.85108HepG2GTF2F1
chr753360145336075+intron-Distal4.527445.44815HepG2PRPF4
chr753403945340410+intron-Distal4.4022563.27751K562RPS3
chr753346575334690+intron-Distal,intron-Proximal3.378724.90312HepG2FAM120A
chr753355165335604+intron-Distal3.9635412.90584HepG2CSTF2T
chr753348555334930+intron-Distal4.5831811.36931HepG2PRPF4
chr753364325336489+intron-Distal,intron-Proximal5.6072522.90161HepG2FAM120A
chr753242805324360+intron-Distal3.279334.21158HepG2CSTF2T
chr753403895340394+intron-Distal,intron-Proximal4.4022563.27751K562RPS3
chr753359145335950+intron-Distal4.103318.29908HepG2CSTF2T
chr753360795336106+intron-Distal3.791565.85439HepG2CSTF2T
chr753354695335489+intron-Distal3.8274011.41717HepG2CSTF2T
chr753358555335902+intron-Distal4.7257613.29240HepG2CSTF2T
chr753351215335167+intron-Distal3.895319.22172HepG2CSTF2T
chr753354435335469+intron-Distal3.460998.54455HepG2CSTF2T
chr753350345335087+intron-Distal4.2326417.43534HepG2CSTF2T
chr753358075335855+intron-Distal3.7915611.83100HepG2CSTF2T
chr753345835334676+intron-Distal,intron-Proximal5.1344910.32454HepG2PRPF4
chr753232695323368+intron-Distal4.630685.89911HepG2NKRF
chr753349635335014+intron-Distal3.502869.67468HepG2CSTF2T
chr753232185323325+intron-Distal4.030805.55843HepG2RBFOX2
chr753347125334752+intron-Distal3.214704.13948HepG2PRPF4
chr753362615336297+intron-Distal5.245419.99173HepG2CSTF2T
chr753403905340412+intron-Distal,intron-Proximal4.431149.65734HepG2RPS3
chr753362265336313+intron-Distal6.9942130.79087HepG2FAM120A
chr753403915340411+intron-Distal,intron-Proximal4.898054.19857K562SBDS
chr753419005341987+intron-Distal3.868113.71997HepG2ILF3
chr753348385334934+intron-Distal4.400974.69805HepG2NKRF
chr753403905340411+intron-Distal,intron-Proximal5.1461814.52480K562RPS11
chr753360225336071+intron-Distal4.7361512.37307HepG2FAM120A
chr753360175336061+intron-Distal4.4753910.78166HepG2CSTF2T
chr753403865340391+intron-Proximal4.898054.19857K562SBDS
chr753364925336558+intron-Proximal4.692644.99324HepG2GTF2F1
chr753364895336566+intron-Proximal4.8196624.58990HepG2FAM120A
chr753403835340389+intron-Proximal4.4022563.27751K562RPS3
chr753364765336565+intron-Proximal4.5413012.34279HepG2PRPF4
chr753403865340390+intron-Proximal4.8461710.36166HepG2RPS3
chr753403045340353+intron-Proximal5.8802412.86303HepG2AQR
chr753345815334626+intron-Proximal3.470099.67230HepG2CSTF2T
chr753403865340390+intron-Proximal5.1461814.52480K562RPS11
chr753403015340339+intron-Proximal3.7194010.11479HepG2PRPF8
chr753345975334617+intron-Proximal4.581354.83789HepG2FAM120A
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for SLC29A4 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for SLC29A4 is not available on ENCORE database.

  • 88 RBPs can affect the levels of SLC29A4.  








The Knockdown/knockout RNA-Seq assay for SLC29A4 is not available on ENCORE database.





88 RBPs can affect the gene expression of SLC29A4 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
SLC29A4ENSG00000164638.64452.024901752.268401.3451024.0191021.82550HepG2ABCF1
SLC29A4ENSG00000164638.6441.749901491.62630-1.7556082.0360079.93690HepG2ACO1
SLC29A4ENSG00000164638.6758.29480377.402501.006606.878805.39310HepG2ADAR
SLC29A4ENSG00000164638.6328.618501940.37920-2.561909.229808.32130HepG2AKAP1
SLC29A4ENSG00000164638.61881.164201491.209100.335005.706604.81370HepG2CKAP4
SLC29A4ENSG00000164638.6204.83010393.98940-0.943702.229801.54860HepG2CNOT7
SLC29A4ENSG00000164638.61081.07640543.834900.991104.685503.81220HepG2CPSF6
SLC29A4ENSG00000164638.6783.11440387.031901.016708.724706.94780HepG2YBX3
SLC29A4ENSG00000164638.6400.86970660.16480-0.719705.903405.03190HepG2CELF1
SLC29A4ENSG00000164638.6968.94750709.659100.449203.349202.54710HepG2DAZAP1
SLC29A4ENSG00000164638.61680.721301379.497900.284804.073503.08460HepG2DDX19B
SLC29A4ENSG00000164638.6517.59040387.551900.417302.919201.73250HepG2DDX1
SLC29A4ENSG00000164638.61166.61440737.297500.661903.097702.38320HepG2DDX21
SLC29A4ENSG00000164638.61093.979201410.76150-0.366903.043801.68730HepG2DDX47
SLC29A4ENSG00000164638.62399.100501427.058100.7493021.5195020.05370HepG2DKC1
SLC29A4ENSG00000164638.6587.75330380.008000.629102.207501.57240HepG2DNAJC21
SLC29A4ENSG00000164638.6723.36740376.693600.9412018.8063017.25260HepG2DNAJC2
SLC29A4ENSG00000164638.61549.74240919.192600.753502.358701.50570HepG2EEF2
SLC29A4ENSG00000164638.61027.24870697.111700.559202.638401.58260HepG2EIF3G
SLC29A4ENSG00000164638.6835.36500670.793100.316402.185501.45530HepG2EIF4G2
SLC29A4ENSG00000164638.62552.808301517.215500.750603.733702.47610HepG2ESF1
SLC29A4ENSG00000164638.62273.503801597.536000.509004.843904.08830HepG2ETF1
SLC29A4ENSG00000164638.6323.15790703.28990-1.121903.364002.12060HepG2FASTKD2
SLC29A4ENSG00000164638.6542.193101769.14600-1.706207.134305.95750HepG2FIP1L1
SLC29A4ENSG00000164638.6903.724901816.17340-1.0069021.2247019.15970HepG2FUBP3
SLC29A4ENSG00000164638.62603.94100616.348202.0788053.2271050.85690HepG2GPKOW
SLC29A4ENSG00000164638.61478.24820383.649001.945907.058106.09770HepG2HNRNPA1
SLC29A4ENSG00000164638.61219.43830516.382501.2396012.2172010.85740HepG2HNRNPF
SLC29A4ENSG00000164638.6872.95600646.390500.433406.098905.13250HepG2HNRNPL
SLC29A4ENSG00000164638.62043.16400588.204301.7963024.3249022.75830HepG2HNRNPLL
SLC29A4ENSG00000164638.6878.86610423.929801.0517015.4113014.07720HepG2HNRNPU
SLC29A4ENSG00000164638.61256.13180508.492501.3046027.2794025.30200HepG2IGF2BP1
SLC29A4ENSG00000164638.6775.635301613.26960-1.056503.330102.59500HepG2IGF2BP2
SLC29A4ENSG00000164638.6703.67620375.948100.904303.918802.45310HepG2KHDRBS1
SLC29A4ENSG00000164638.62493.376201519.835600.714102.270201.52490HepG2LARP4
SLC29A4ENSG00000164638.6751.31320548.469200.453902.770501.55610HepG2LIN28B
SLC29A4ENSG00000164638.6357.22700780.62020-1.127802.921801.84110HepG2METAP2
SLC29A4ENSG00000164638.61661.96150600.178301.469304.716003.43270HepG2MTPAP
SLC29A4ENSG00000164638.61283.59720509.165601.333902.876201.39750HepG2NOLC1
SLC29A4ENSG00000164638.61135.46340521.650701.122009.049807.75360HepG2NSUN2
SLC29A4ENSG00000164638.6683.116701709.53500-1.3234050.8569048.87500HepG2PCBP1
SLC29A4ENSG00000164638.6917.65040378.109201.279005.477404.47100HepG2PPIL4
SLC29A4ENSG00000164638.61172.43960907.988200.368702.472901.73680HepG2PRPF4
SLC29A4ENSG00000164638.6420.516901739.48370-2.04840102.77130100.65450HepG2PTBP1
SLC29A4ENSG00000164638.62706.94880671.799002.0105081.7220079.12730HepG2PUF60
SLC29A4ENSG00000164638.6414.34720713.20280-0.783507.796706.90630HepG2PUM1
SLC29A4ENSG00000164638.6596.202201519.30460-1.3495054.0013051.99270HepG2PUS1
SLC29A4ENSG00000164638.6137.44700641.69610-2.223002.769202.06430HepG2RAVER1
SLC29A4ENSG00000164638.6982.816702181.98450-1.150608.486607.09350HepG2RBM15
SLC29A4ENSG00000164638.6821.987301335.21370-0.699908.545207.75100HepG2RBM22
SLC29A4ENSG00000164638.61206.38180511.755101.2371016.7914014.30990HepG2RCC2
SLC29A4ENSG00000164638.61575.68790396.135601.9918036.5378033.81180HepG2RPS3A
SLC29A4ENSG00000164638.6954.63640377.520201.3383019.7668018.26610HepG2SAFB2
SLC29A4ENSG00000164638.6620.11060373.016500.733202.928801.58190HepG2SART3
SLC29A4ENSG00000164638.61063.20340430.385801.304604.785702.90090HepG2SF1
SLC29A4ENSG00000164638.63520.744502529.928600.476703.258302.52570HepG2SF3A3
SLC29A4ENSG00000164638.61076.08870582.130500.886305.410404.44800HepG2SF3B1
SLC29A4ENSG00000164638.61220.038501811.08460-0.569907.992207.06930HepG2SF3B4
SLC29A4ENSG00000164638.61636.48890644.270501.3448061.4915059.16160HepG2SLBP
SLC29A4ENSG00000164638.6885.66340385.209801.201004.355102.63120HepG2SNRNP200
SLC29A4ENSG00000164638.6147.444201508.02040-3.3544064.3711062.78240HepG2SRFBP1
SLC29A4ENSG00000164638.6585.190101890.35670-1.6917081.0360079.28290HepG2SRSF1
SLC29A4ENSG00000164638.6955.34590663.373700.526102.120301.56360HepG2SRSF5
SLC29A4ENSG00000164638.6775.10290507.317900.611408.664407.54990HepG2SRSF7
SLC29A4ENSG00000164638.6445.142401537.88560-1.7886082.7613080.62200HepG2SRSF9
SLC29A4ENSG00000164638.63597.948201309.223901.4584091.1786089.31870HepG2SSB
SLC29A4ENSG00000164638.61228.64320754.378700.7036013.4445012.24420HepG2SUCLG1
SLC29A4ENSG00000164638.6362.082601699.06110-2.23030100.9823098.22920HepG2TAF15
SLC29A4ENSG00000164638.61812.62580573.664401.6597033.8330031.84420HepG2TARDBP
SLC29A4ENSG00000164638.6845.389201561.27490-0.8850017.6591015.61460HepG2TIA1
SLC29A4ENSG00000164638.61551.39000411.875701.9132019.2113018.11130HepG2TIAL1
SLC29A4ENSG00000164638.6939.13670415.612701.1760029.6217028.01920HepG2TRIM56
SLC29A4ENSG00000164638.61295.07910656.414700.980303.331402.36540HepG2TUFM
SLC29A4ENSG00000164638.62920.744102243.660500.380407.836306.75900HepG2UPF1
SLC29A4ENSG00000164638.61069.73230463.368901.206902.201701.31160HepG2UPF2
SLC29A4ENSG00000164638.62758.643002306.164100.258402.722501.68160HepG2UTP18
SLC29A4ENSG00000164638.61059.426302166.16500-1.0319025.0420023.51460HepG2UTP3
SLC29A4ENSG00000164638.6534.75260354.848000.591602.325501.32790HepG2XPO5
SLC29A4ENSG00000164638.61809.16850498.686501.8590013.5039011.91980HepG2XRN2
SLC29A4ENSG00000164638.6679.12360896.00780-0.399802.998102.30400HepG2ZC3H8
SLC29A4ENSG00000164638.61773.004602467.59610-0.4769013.0071012.04320HepG2ZNF622
SLC29A4ENSG00000164638.6174.9286093.407300.905104.862104.14450K562AGGF1
SLC29A4ENSG00000164638.6155.80060102.656100.601802.455901.53840K562AKAP8
SLC29A4ENSG00000164638.6140.7955097.198400.534501.843501.30560K562AKAP8L
SLC29A4ENSG00000164638.637.8930013.305701.509802.354101.39350K562CSTF2
SLC29A4ENSG00000164638.614.1324051.57490-1.867704.415103.67490K562FXR1
SLC29A4ENSG00000164638.651.6000096.36670-0.901202.212901.71620K562PUS1
SLC29A4ENSG00000164638.672.4406025.449701.509003.789301.93070K562SBDS
SLC29A4ENSG00000164638.6103.8623039.675101.388303.791602.17180K562SFPQ
SLC29A4ENSG00000164638.657.8939022.849701.341102.389501.45400K562SRFBP1
SLC29A4ENSG00000164638.651.4213022.623801.184402.412701.65410K562TIA1
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for SLC29A4 is not available on ENCORE database.






No RBPs affect the alternative splcing events of SLC29A4 on ENCORE database.





The Knockdown/knockout RNA-Seq assay for SLC29A4 is not avaliable on ENCORE database.