SERINC2

General Information

Gene Name       : SERINC2
Gene ID             : ENSG00000168528.11
Essential Gene : No

Functions

Localization

Domains (AlphaFold: SERINC2)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878SERINC2ENSG00000168528.110.000.220.11ENCSR000AEF
HepG2SERINC2ENSG00000168528.118.871.995.43ENCSR985KAT
K562SERINC2ENSG00000168528.110.890.470.68ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for SERINC2 is not avaliable on ENCORE database.



Proteins bound to RNA
  • SERINC2 RNA is bound by 22 proteins.  







eCLIP assay for SERINC2 is not avaliable on ENCORE database.





22 proteins are bound to SERINC2 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr13190705231907163+3'-UTR3.083405.61224HepG2LARP4
chr13190727531907319+3'-UTR4.907703.39700HepG2PCBP2
chr13190731231907377+3'-UTR4.084076.74978HepG2PCBP1
chr13190725331907312+3'-UTR4.782286.56740HepG2PCBP1
chr13190696031907185+3'-UTR,CDS3.6844014.42088HepG2UPF1
chr13190729731907459+3'-UTR4.3224917.60577HepG2UPF1
chr13190718531907264+3'-UTR3.362045.76233HepG2UPF1
chr13188607531886152+5'-UTR,CDS,intron-Distal,intron-Proximal5.1913427.30368HepG2DDX3X
chr13189941731899537+CDS,intron-Proximal3.869759.20688HepG2AQR
chr13190176431901866+CDS,intron-Proximal4.792506.58230HepG2AQR
chr13190226031902328+CDS3.062483.72946HepG2PPIG
chr13190187731901916+CDS,intron-Proximal3.939773.29371HepG2IGF2BP1
chr13190177431901841+CDS,intron-Proximal3.713235.22697HepG2SF3B4
chr13189649131896570+CDS,intron-Proximal4.267616.28719HepG2SF3A3
chr13189867631898746+CDS3.408063.17635HepG2PPIG
chr13190235631902385+CDS3.592704.43462HepG2YBX3
chr13189875931898763+CDS,intron-Proximal4.100307.99229HepG2AQR
chr13189655331896626+CDS4.0917813.13583HepG2DDX3X
chr13189653731896553+CDS,intron-Proximal4.6852010.28334HepG2DDX3X
chr13190251631902597+intron-Distal3.270033.00221HepG2CSTF2T
chr13190498431904996+intron-Distal4.146024.10323HepG2PRPF4
chr13190473531904785+intron-Distal4.677673.41584HepG2FAM120A
chr13188694031887053+intron-Distal,intron-Proximal4.0829810.04312HepG2PRPF4
chr13190428831904325+intron-Distal4.475684.35952HepG2PRPF4
chr13188729231887343+intron-Distal3.326615.02576HepG2TIAL1
chr13190502431905103+intron-Distal4.7824111.38038HepG2CSTF2T
chr13190511331905150+intron-Distal5.148565.35385HepG2PRPF4
chr13190503831905098+intron-Distal6.0370815.92477HepG2FAM120A
chr13190501931905075+intron-Distal5.095245.17373HepG2FTO
chr13188864531888697+intron-Distal,intron-Proximal3.689185.26543HepG2RBFOX2
chr13190451331904532+intron-Distal3.653224.51950HepG2FASTKD2
chr13190492131905024+intron-Distal5.751719.60672HepG2CSTF2T
chr13189835331898384+intron-Distal,intron-Proximal3.109745.19925HepG2PRPF4
chr13188624131886328+intron-Distal,intron-Proximal3.690815.65555HepG2PTBP1
chr13188626931886326+intron-Distal3.562854.14880HepG2CSTF2T
chr13190503131905090+intron-Distal4.531683.85108HepG2GTF2F1
chr13190256631902582+intron-Distal3.880583.39593HepG2PRPF4
chr13190502531905113+intron-Distal5.3470121.49732HepG2PRPF4
chr13190428431904330+intron-Distal3.512284.31182HepG2FASTKD2
chr13190441231904455+intron-Distal3.294515.66167HepG2PRPF4
chr13188874631888829+intron-Distal,intron-Proximal3.939376.61691HepG2RBFOX2
chr13188745631887511+intron-Distal4.115224.76224HepG2NKRF
chr13188695331887057+intron-Distal,intron-Proximal4.305327.23771HepG2CSTF2T
chr13190263231902722+intron-Distal3.782414.84557HepG2CSTF2T
chr13188736131887386+intron-Distal3.682553.07706HepG2TIAL1
chr13190504831905110+intron-Distal4.753893.30242K562FTO
chr13190443131904509+intron-Distal4.951316.32277HepG2CSTF2T
chr13190167531901766+intron-Distal,intron-Proximal3.494743.57220HepG2PRPF4
chr13190527831905324+intron-Distal4.129933.28946K562FTO
chr13188649031886546+intron-Distal4.103624.48652HepG2PTBP1
chr13190505531905101+intron-Distal4.542038.63494HepG2FASTKD2
chr13190502931905160+intron-Distal5.352866.32364K562FAM120A
chr13190493231904984+intron-Distal5.036386.58205HepG2PRPF4
chr13190491331905038+intron-Distal6.6904420.73411HepG2FAM120A
chr13188727531887359+intron-Distal3.531239.28721HepG2NKRF
chr13190448531904564+intron-Distal3.545215.00504HepG2PRPF4
chr13190566931905726+intron-Distal,intron-Proximal3.255165.43129HepG2PRPF4
chr13190176631901823+intron-Proximal3.590856.06684HepG2PRPF4
chr13190242031902481+intron-Proximal3.320614.90794HepG2FASTKD2
chr13189876331898798+intron-Proximal4.8977716.89516HepG2AQR
chr13189827931898353+intron-Proximal3.176937.17705HepG2PRPF4
chr13189876231898833+intron-Proximal4.230267.38067HepG2PRPF8
chr13189811631898144+intron-Proximal4.565503.98427HepG2SF3B4
chr13189807931898116+intron-Proximal3.065503.02665HepG2SF3B4
chr13189879831898840+intron-Proximal6.0570512.86303HepG2AQR
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for SERINC2 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for SERINC2 is not available on ENCORE database.

  • 122 RBPs can affect the levels of SERINC2.  








The Knockdown/knockout RNA-Seq assay for SERINC2 is not available on ENCORE database.





122 RBPs can affect the gene expression of SERINC2 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
SERINC2ENSG00000168528.7286.91530722.84980-1.333103.349302.17650HepG2AATF
SERINC2ENSG00000168528.7932.714902070.64210-1.1506011.0602010.01420HepG2ACO1
SERINC2ENSG00000168528.7240.53450546.90430-1.185004.494903.26170HepG2ADAR
SERINC2ENSG00000168528.7446.513203081.36460-2.786804.921104.23880HepG2AKAP1
SERINC2ENSG00000168528.7679.37870364.850200.896804.239403.07850HepG2BCCIP
SERINC2ENSG00000168528.71086.97260316.931301.7780028.7882026.41460HepG2BCLAF1
SERINC2ENSG00000168528.72827.86440935.787301.5954049.1070047.20300HepG2BOP1
SERINC2ENSG00000168528.72218.388401124.802000.979703.302602.46960HepG2CALR
SERINC2ENSG00000168528.73894.11250859.074902.1803085.9091083.05130HepG2CPSF6
SERINC2ENSG00000168528.74584.141802502.869400.873003.596502.33860HepG2CPSF7
SERINC2ENSG00000168528.7904.78950560.877100.689803.346202.22710HepG2YBX3
SERINC2ENSG00000168528.785.19220225.22950-1.402604.396803.07400HepG2CSTF2
SERINC2ENSG00000168528.72344.12900804.293301.5432092.4456089.50730HepG2DAZAP1
SERINC2ENSG00000168528.71158.451001914.81740-0.725005.706904.56800HepG2DDX19B
SERINC2ENSG00000168528.7415.01830780.16950-0.910602.169301.37140HepG2DDX24
SERINC2ENSG00000168528.71387.60440358.773001.9514034.1583031.94430HepG2DDX55
SERINC2ENSG00000168528.75256.555102465.739501.092003.972902.76870HepG2DDX5
SERINC2ENSG00000168528.74560.534302537.053700.845903.128702.47550HepG2DDX6
SERINC2ENSG00000168528.71165.695001980.91410-0.765006.679405.71460HepG2DKC1
SERINC2ENSG00000168528.72213.61630550.648202.0071013.7384012.26830HepG2DNAJC21
SERINC2ENSG00000168528.71864.90800545.918201.77220106.78270103.31850HepG2DNAJC2
SERINC2ENSG00000168528.7643.447201278.86680-0.991009.390207.81870HepG2EEF2
SERINC2ENSG00000168528.7673.012601065.91560-0.663406.726904.99940HepG2EFTUD2
SERINC2ENSG00000168528.75019.791902436.634201.042604.262303.53530HepG2EIF2S1
SERINC2ENSG00000168528.7627.14650793.34660-0.339103.211702.32380HepG2EIF4G1
SERINC2ENSG00000168528.72164.11240760.000001.5096023.9120021.74470HepG2EIF4G2
SERINC2ENSG00000168528.71051.686601705.59130-0.697602.852002.24310HepG2ETF1
SERINC2ENSG00000168528.71671.75370927.990900.8491017.0293014.22390HepG2FAM120A
SERINC2ENSG00000168528.71448.65110759.084400.932303.011401.82110HepG2FASTKD2
SERINC2ENSG00000168528.72114.54690860.607301.296808.469106.70890HepG2FTO
SERINC2ENSG00000168528.7414.08960802.81810-0.955103.522002.26120HepG2FUS
SERINC2ENSG00000168528.71014.864902719.13050-1.421902.263701.63530HepG2FXR1
SERINC2ENSG00000168528.7498.63490924.19150-0.890209.877108.24360HepG2GEMIN5
SERINC2ENSG00000168528.71503.49350973.749400.626605.841704.93550HepG2GPKOW
SERINC2ENSG00000168528.7364.33640555.92500-0.609602.070101.50190HepG2HNRNPA1
SERINC2ENSG00000168528.71177.45840739.091200.671808.753007.26810HepG2HNRNPA2B1
SERINC2ENSG00000168528.71450.13780618.407801.229503.089702.36190HepG2HNRNPC
SERINC2ENSG00000168528.72285.40850890.828401.3591029.4318027.48270HepG2HNRNPF
SERINC2ENSG00000168528.71374.62940732.698200.9077010.665509.42040HepG2HNRNPL
SERINC2ENSG00000168528.74570.91300929.274102.2982089.8936087.22950HepG2HNRNPLL
SERINC2ENSG00000168528.72910.714004993.82010-0.778807.648805.65300HepG2HSPD1
SERINC2ENSG00000168528.72243.00670877.206901.3543024.3541022.45860HepG2IGF2BP1
SERINC2ENSG00000168528.71529.31030627.495901.285109.083007.83240HepG2ILF2
SERINC2ENSG00000168528.73211.426101892.515500.7628013.0952011.08340HepG2KIF1C
SERINC2ENSG00000168528.72687.005604990.50300-0.893204.614102.99520HepG2KRR1
SERINC2ENSG00000168528.71052.722002720.09480-1.369502.193501.60750HepG2MAGOH
SERINC2ENSG00000168528.7902.174202734.77200-1.599902.679602.05800HepG2MATR3
SERINC2ENSG00000168528.72278.73430947.911401.265305.038103.70500HepG2MTPAP
SERINC2ENSG00000168528.74366.983802086.062001.065805.699803.96360HepG2NAA15
SERINC2ENSG00000168528.71008.29310545.173400.887008.709906.24760HepG2NIP7
SERINC2ENSG00000168528.72788.294401200.704901.215409.544306.87110HepG2NOLC1
SERINC2ENSG00000168528.7602.15700329.696200.868902.402301.38950HepG2NONO
SERINC2ENSG00000168528.71691.85340666.237001.344404.853301.83520HepG2NPM1
SERINC2ENSG00000168528.71525.35100824.036600.8883013.4309011.90840HepG2NSUN2
SERINC2ENSG00000168528.71554.87580628.750601.306103.547301.47860HepG2NUFIP2
SERINC2ENSG00000168528.7998.94430612.719800.705105.516002.68170HepG2NUSAP1
SERINC2ENSG00000168528.74622.096902121.741001.123202.398101.58280HepG2PABPC1
SERINC2ENSG00000168528.74459.215202490.423500.840303.249302.46870HepG2PABPC4
SERINC2ENSG00000168528.7435.83060608.01260-0.480302.122001.37240HepG2PARN
SERINC2ENSG00000168528.7979.361302595.03700-1.405808.794507.81140HepG2PCBP1
SERINC2ENSG00000168528.73690.825901968.889400.9065016.0561012.53460HepG2PES1
SERINC2ENSG00000168528.71609.22980547.913101.554305.984104.93350HepG2PPIL4
SERINC2ENSG00000168528.7312.51900798.70110-1.353705.354103.70340HepG2PRPF6
SERINC2ENSG00000168528.7486.56440276.498300.815303.498602.60010HepG2PRPF8
SERINC2ENSG00000168528.71024.918402640.88940-1.365507.993007.16220HepG2PTBP1
SERINC2ENSG00000168528.7986.71360761.264800.374102.015601.49530HepG2PUF60
SERINC2ENSG00000168528.7962.329802109.01010-1.1320011.5327010.42280HepG2PUS1
SERINC2ENSG00000168528.71776.306401146.825700.631103.245401.38880HepG2RBM14
SERINC2ENSG00000168528.76275.305003803.361000.7223019.0955017.19430HepG2RBM15
SERINC2ENSG00000168528.71356.43920632.911701.099603.557401.47770HepG2RBM17
SERINC2ENSG00000168528.71601.79200555.784601.527006.639503.98350HepG2RBM39
SERINC2ENSG00000168528.7596.648302938.77200-2.3003016.0257014.92770HepG2NELFE
SERINC2ENSG00000168528.7960.329502737.58240-1.511309.330408.29870HepG2RECQL
SERINC2ENSG00000168528.72122.89970959.711001.145307.026306.01250HepG2RPLP0
SERINC2ENSG00000168528.71268.78900720.606400.816103.309702.27580HepG2RPS10
SERINC2ENSG00000168528.7698.286601010.17480-0.532704.403303.64550HepG2RPS19
SERINC2ENSG00000168528.72883.59360547.049602.39800145.15240141.87530HepG2SAFB2
SERINC2ENSG00000168528.71360.587802774.04760-1.0278012.9618011.43980HepG2SF3A3
SERINC2ENSG00000168528.71511.91550919.752300.717004.779903.87390HepG2SF3B1
SERINC2ENSG00000168528.71625.788902748.89300-0.757703.407602.75990HepG2SF3B4
SERINC2ENSG00000168528.72651.60750729.827301.86110135.90850132.78470HepG2SLBP
SERINC2ENSG00000168528.71056.68290637.908600.728009.466308.39200HepG2SMN1
SERINC2ENSG00000168528.71418.33160749.180400.920706.065204.60500HepG2SMNDC1
SERINC2ENSG00000168528.71510.92700715.002101.079309.429606.51500HepG2SND1
SERINC2ENSG00000168528.73501.51740546.443402.6797019.6095016.03340HepG2SNRNP200
SERINC2ENSG00000168528.72508.492201610.258600.639406.555505.87440HepG2SRFBP1
SERINC2ENSG00000168528.7307.444302869.49970-3.2224024.5045023.40210HepG2SRSF1
SERINC2ENSG00000168528.71159.44590751.575700.625305.614204.76840HepG2SRSF5
SERINC2ENSG00000168528.72131.87680875.225701.2843043.9539041.89010HepG2SRSF7
SERINC2ENSG00000168528.72948.626002334.706500.336701.934101.45680HepG2SRSF9
SERINC2ENSG00000168528.7728.427901398.23760-0.940804.506403.88380HepG2SSB
SERINC2ENSG00000168528.73225.081904976.97780-0.625906.127704.31720HepG2SSRP1
SERINC2ENSG00000168528.76293.513202071.977401.602807.237405.76900HepG2SUPT6H
SERINC2ENSG00000168528.7803.48600357.075801.169906.389005.42430HepG2SUPV3L1
SERINC2ENSG00000168528.7558.500802579.91320-2.2077014.5011013.36580HepG2TAF15
SERINC2ENSG00000168528.73104.06780905.963901.7765058.4169055.90510HepG2TARDBP
SERINC2ENSG00000168528.71498.834904888.46970-1.7055013.5191011.37890HepG2TBRG4
SERINC2ENSG00000168528.7447.95520239.288400.904504.659503.41400HepG2TFIP11
SERINC2ENSG00000168528.73302.870202369.851300.478802.506601.70830HepG2TIA1
SERINC2ENSG00000168528.71252.41000596.757801.0694023.2789022.09310HepG2TIAL1
SERINC2ENSG00000168528.72024.97640602.269501.7493015.7701014.57770HepG2TRIM56
SERINC2ENSG00000168528.71319.92620743.638400.827702.673901.81660HepG2TUFM
SERINC2ENSG00000168528.71290.142802626.30650-1.025502.056001.50560HepG2U2AF1
SERINC2ENSG00000168528.71833.47720635.854001.527705.762004.28770HepG2U2AF2
SERINC2ENSG00000168528.72688.68300787.073601.7722020.6854018.43720HepG2UBE2L3
SERINC2ENSG00000168528.7360.28560210.882900.772602.298701.60580HepG2UCHL5
SERINC2ENSG00000168528.74108.930002460.163100.739906.973905.94910HepG2UPF1
SERINC2ENSG00000168528.71459.420202528.65150-0.793009.413707.61720HepG2UTP18
SERINC2ENSG00000168528.7828.285902375.18010-1.5198053.2915051.18660HepG2UTP3
SERINC2ENSG00000168528.77310.861602705.698601.43390154.97520152.67940HepG2ZNF622
SERINC2ENSG00000168528.71063.58180732.890200.537202.815501.50830HepG2ZRANB2
SERINC2ENSG00000168528.7200.08220145.331600.461101.924501.43490K562AGGF1
SERINC2ENSG00000168528.7127.4586063.293801.009803.681001.97780K562CKAP4
SERINC2ENSG00000168528.71.1235011.67260-3.377102.222101.59890K562G3BP2
SERINC2ENSG00000168528.7203.0201062.866301.6912011.5635010.41610K562HNRNPC
SERINC2ENSG00000168528.764.8471024.162201.424203.470002.27300K562IGF2BP2
SERINC2ENSG00000168528.788.3975042.521101.055702.616201.71240K562KRR1
SERINC2ENSG00000168528.7129.8100060.228401.107802.783901.79080K562PABPN1
SERINC2ENSG00000168528.7151.5531081.044700.902903.501202.59330K562POLR2G
SERINC2ENSG00000168528.7203.83460146.125700.480102.044501.52050K562RBM15
SERINC2ENSG00000168528.7134.2611072.244600.894003.351702.15950K562SAFB
SERINC2ENSG00000168528.7139.3378062.731001.151203.412101.68170K562SBDS
SERINC2ENSG00000168528.779.67800124.40720-0.642802.217801.48150K562SF3A3
SERINC2ENSG00000168528.7117.6795062.156800.920803.394301.98320K562SLBP
SERINC2ENSG00000168528.7197.76100127.458100.633603.007402.03810K562SRPK2
SERINC2ENSG00000168528.747.1501081.30400-0.786102.040301.33490K562SYNCRIP
SERINC2ENSG00000168528.780.6307024.443201.721806.224805.12640K562TARDBP
SERINC2ENSG00000168528.7118.6975054.218901.130302.215601.38730K562TIAL1
SERINC2ENSG00000168528.750.8814023.159001.135502.330001.34450K562TRA2A
SERINC2ENSG00000168528.763.55890133.68140-1.072604.994904.05990K562UPF1
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for SERINC2 is not available on ENCORE database.





1 RBPs can affect the splicing of SERINC2 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
MXESERINC2ENSG00000168528.7chr1+31897529318977203189817631898256318965393189670131898622318987050.184000.000500.015201includedHepG2DDX55

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for SERINC2 is not avaliable on ENCORE database.