RPN1

General Information

Gene Name       : RPN1
Gene ID             : ENSG00000163902.11
Essential Gene : Yes

Functions

Localization

Domains (AlphaFold: RPN1)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878RPN1ENSG00000163902.1185.5796.9691.26ENCSR000AEF
HepG2RPN1ENSG00000163902.11235.00214.57224.78ENCSR985KAT
K562RPN1ENSG00000163902.11108.00113.16110.58ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for RPN1 is not avaliable on ENCORE database.



Proteins bound to RNA
  • RPN1 RNA is bound by 30 proteins.  







eCLIP assay for RPN1 is not avaliable on ENCORE database.





30 proteins are bound to RPN1 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr3128338997128339050-3'-UTR,intron-Distal,intron-Proximal4.462263.31824HepG2TIAL1
chr3128339092128339195-3'-UTR,intron-Distal3.4425014.27903HepG2LARP4
chr3128338906128338923-3'-UTR,intron-Distal,intron-Proximal7.3998778.16117K562PABPC4
chr3128338817128338863-3'-UTR,intron-Distal5.324039.32163K562TARDBP
chr3128339060128339128-3'-UTR,intron-Distal6.2478811.71673HepG2SUB1
chr3128338920128338974-3'-UTR,intron-Distal,intron-Proximal3.848964.86893HepG2SUB1
chr3128356734128356796-3'-UTR,CDS,intron-Distal,intron-Proximal4.270976.74427K562IGF2BP1
chr3128363756128363837-3'-UTR,CDS,intron-Distal,intron-Proximal3.550978.02704K562BUD13
chr3128338890128338978-3'-UTR,intron-Distal,intron-Proximal3.4910316.41566HepG2DDX55
chr3128339195128339272-3'-UTR,CDS,intron-Distal3.7719614.50848HepG2LARP4
chr3128356730128356793-3'-UTR,CDS,intron-Distal,intron-Proximal5.1477436.06223K562YBX3
chr3128356716128356774-3'-UTR,CDS,intron-Distal6.3941123.93669HepG2LIN28B
chr3128339128128339192-3'-UTR,intron-Distal4.313427.84240HepG2SUB1
chr3128356887128356927-3'-UTR,CDS,intron-Distal3.476929.65283HepG2RPS3
chr3128363766128363835-3'-UTR,CDS,intron-Distal,intron-Proximal3.148043.86423K562GPKOW
chr3128339187128339269-3'-UTR,CDS,intron-Distal4.8039537.52182HepG2RPS3
chr3128356732128356782-3'-UTR,CDS,intron-Distal,intron-Proximal3.400478.39507K562SND1
chr3128338990128339059-3'-UTR,intron-Distal,intron-Proximal6.4951711.57192K562CPEB4
chr3128356796128356937-3'-UTR,CDS,intron-Distal,intron-Proximal3.111654.66380K562IGF2BP1
chr3128338996128339039-3'-UTR,intron-Distal,intron-Proximal3.634525.52950K562PABPC4
chr3128339157128339249-3'-UTR,intron-Distal3.266603.65894HepG2GRSF1
chr3128338956128338983-3'-UTR,intron-Distal,intron-Proximal3.8700613.26557K562PABPC4
chr3128363820128363826-3'-UTR,CDS,intron-Distal3.7122511.34202HepG2DDX3X
chr3128338819128338863-3'-UTR,intron-Distal4.832186.47347K562APOBEC3C
chr3128339191128339244-3'-UTR,intron-Distal4.3121610.10337K562RPS3
chr3128356777128356799-3'-UTR,CDS,intron-Distal,intron-Proximal6.0516019.18678HepG2LIN28B
chr3128356839128356867-3'-UTR,CDS,intron-Distal,intron-Proximal4.678748.55362K562SND1
chr3128363773128363827-3'-UTR,CDS,intron-Distal,intron-Proximal5.5427410.87477HepG2G3BP1
chr3128339120128339229-3'-UTR,intron-Distal3.992139.35498K562METAP2
chr3128338923128338949-3'-UTR,intron-Distal,intron-Proximal5.82108400.00000K562PABPC4
chr3128338877128338977-3'-UTR,intron-Distal,intron-Proximal4.320059.85374K562TIA1
chr3128356790128356914-3'-UTR,CDS,intron-Distal,intron-Proximal4.776767.09156HepG2IGF2BP1
chr3128369621128369654-5'-UTR,CDS,intron-Distal5.545144.97000K562DDX3X
chr3128345579128345610-CDS,intron-Distal3.3807410.25087HepG2RPS3
chr3128369342128369414-CDS,intron-Distal3.368629.43317HepG2PRPF8
chr3128348945128348979-CDS,intron-Distal3.461847.28733HepG2RPS3
chr3128348793128348805-CDS,intron-Distal,intron-Proximal5.7008715.65405K562LIN28B
chr3128344418128344478-CDS,intron-Distal4.0021812.80079HepG2SND1
chr3128341110128341227-CDS,intron-Distal4.568014.02157HepG2FTO
chr3128350836128350884-CDS,intron-Distal,intron-Proximal3.5549910.73608K562SND1
chr3128344413128344484-CDS,intron-Distal4.072776.30845K562METAP2
chr3128344728128344793-CDS,intron-Distal,intron-Proximal3.7714724.05491K562SND1
chr3128344710128344785-CDS,intron-Distal,intron-Proximal3.028513.32605K562DDX24
chr3128341244128341252-CDS,intron-Distal3.9304234.97560K562YBX3
chr3128350788128350954-CDS,intron-Distal,intron-Proximal5.018347.05595K562PUM1
chr3128348910128348937-CDS,intron-Distal3.2185913.37331K562YBX3
chr3128369622128369644-CDS,intron-Distal5.1192218.10756HepG2DDX3X
chr3128339341128339412-CDS,intron-Distal4.4204419.82705HepG2SND1
chr3128348946128348991-CDS,intron-Distal,intron-Proximal4.224263.70678K562BUD13
chr3128369382128369435-CDS,intron-Distal3.8645445.41754HepG2DDX3X
chr3128345575128345634-CDS,intron-Distal,intron-Proximal3.0775311.38868K562SND1
chr3128345575128345609-CDS,intron-Distal,intron-Proximal3.337633.77614HepG2G3BP1
chr3128339280128339321-CDS,intron-Distal4.351243.35417K562METAP2
chr3128345575128345669-CDS,intron-Distal,intron-Proximal5.6469442.29320K562LIN28B
chr3128348826128348909-CDS,intron-Distal3.3062413.34229K562SND1
chr3128350919128350976-CDS,intron-Distal,intron-Proximal3.7463411.99516K562SND1
chr3128348792128348801-CDS,intron-Distal,intron-Proximal5.6480311.46497HepG2LIN28B
chr3128341212128341232-CDS,intron-Distal3.5485116.32279K562YBX3
chr3128345558128345698-CDS,intron-Distal,intron-Proximal4.050739.52373HepG2AQR
chr3128339349128339411-CDS,intron-Distal4.3022521.30434HepG2RPS3
chr3128344741128344786-CDS,intron-Distal,intron-Proximal4.4039920.05265HepG2SND1
chr3128344376128344413-CDS,intron-Distal,intron-Proximal4.1731713.05383K562METAP2
chr3128344751128344788-CDS,intron-Distal,intron-Proximal3.6995911.48475K562YBX3
chr3128344376128344384-CDS,intron-Distal,intron-Proximal3.043409.50954K562SND1
chr3128369550128369616-CDS,intron-Distal3.644087.79680K562RBM15
chr3128369562128369615-CDS,intron-Distal3.315813.97871K562METAP2
chr3128341091128341187-CDS,intron-Distal3.5971215.67117K562SND1
chr3128344769128344831-CDS,intron-Distal,intron-Proximal3.5041615.03648HepG2RPS3
chr3128356671128356733-CDS,intron-Distal4.037393.87091K562IGF2BP2
chr3128341236128341244-CDS,intron-Distal3.6864129.10879K562YBX3
chr3128369438128369497-CDS,intron-Distal5.4626321.76038HepG2RPS3
chr3128339302128339317-CDS,intron-Distal3.541994.77467K562SND1
chr3128348936128348985-CDS,intron-Distal3.008857.39400K562SND1
chr3128369479128369621-CDS,intron-Distal3.6642518.52327K562DDX3X
chr3128369537128369626-CDS,intron-Distal4.2545644.52539HepG2RPS3
chr3128369384128369410-CDS,intron-Distal4.157733.67707K562METAP2
chr3128350851128350888-CDS,intron-Distal,intron-Proximal3.566518.67507K562YBX3
chr3128350816128350917-CDS,intron-Distal,intron-Proximal3.7869911.75798HepG2LIN28B
chr3128341009128341021-CDS,intron-Distal3.118716.10587K562SND1
chr3128344391128344421-CDS,intron-Distal3.6290216.64182HepG2YBX3
chr3128341021128341091-CDS,intron-Distal3.9901717.53515K562SND1
chr3128341065128341154-CDS,intron-Distal4.8987227.12127HepG2SND1
chr3128348854128348904-CDS,intron-Distal3.5446913.85699HepG2RPS3
chr3128344843128344854-CDS,intron-Distal3.655016.36878HepG2SND1
chr3128344376128344379-CDS,intron-Distal,intron-Proximal3.7971832.53841K562YBX3
chr3128350804128350891-CDS,intron-Distal,intron-Proximal4.880748.32277K562LIN28B
chr3128344376128344380-CDS,intron-Distal,intron-Proximal3.2922919.64451HepG2YBX3
chr3128339344128339412-CDS,intron-Distal5.157737.32193K562METAP2
chr3128341179128341253-CDS,intron-Distal,intron-Proximal4.1120122.71972HepG2SND1
chr3128339280128339322-CDS,intron-Distal4.8412013.61031HepG2RPS3
chr3128369383128369438-CDS,intron-Distal3.447726.32104K562SND1
chr3128345575128345601-CDS,intron-Distal,intron-Proximal3.717448.69441HepG2SND1
chr3128356687128356716-CDS,intron-Distal4.8501113.41311HepG2SND1
chr3128348806128348836-CDS,intron-Distal3.201414.01563K562LIN28B
chr3128369382128369437-CDS,intron-Distal4.0594121.66262HepG2RPS3
chr3128339345128339390-CDS,intron-Distal3.374527.61398K562SND1
chr3128345618128345677-CDS,intron-Distal,intron-Proximal4.8585131.76856HepG2LIN28B
chr3128341009128341050-CDS,intron-Distal3.047225.14536HepG2LARP4
chr3128339272128339325-CDS,intron-Distal3.205627.79183HepG2LARP4
chr3128350917128350981-CDS,intron-Distal,intron-Proximal4.2066514.77508K562YBX3
chr3128356703128356717-CDS,intron-Distal3.199445.38711K562YBX3
chr3128344786128344829-CDS,intron-Distal,intron-Proximal4.1711312.62514HepG2SND1
chr3128341249128341252-CDS,intron-Distal3.2431119.77752HepG2YBX3
chr3128369383128369425-CDS,intron-Distal4.7112514.75354HepG2SND1
chr3128344380128344391-CDS,intron-Distal3.5170921.28237HepG2YBX3
chr3128369535128369622-CDS,intron-Distal5.02286400.00000HepG2DDX3X
chr3128369435128369535-CDS,intron-Distal4.6612972.12819HepG2DDX3X
chr3128341233128341253-CDS,intron-Distal,intron-Proximal4.3075115.50571K562METAP2
chr3128348953128348986-CDS,intron-Distal3.1558210.34050K562YBX3
chr3128344379128344418-CDS,intron-Distal3.8813840.80471K562YBX3
chr3128341231128341248-CDS,intron-Distal4.028288.12352HepG2RPS3
chr3128341210128341233-CDS,intron-Distal4.4934214.45590K562METAP2
chr3128341232128341236-CDS,intron-Distal3.4824420.95802K562YBX3
chr3128345669128345677-CDS,intron-Distal,intron-Proximal4.9164016.96193K562LIN28B
chr3128341006128341065-CDS,intron-Distal,intron-Proximal4.3287717.31908HepG2SND1
chr3128344726128344856-CDS,intron-Distal,intron-Proximal3.390354.58459K562GRWD1
chr3128341244128341249-CDS,intron-Distal3.2840620.61916HepG2YBX3
chr3128369202128369278-intron-Distal5.287886.68817HepG2EFTUD2
chr3128340774128340880-intron-Distal4.154764.24431HepG2RBFOX2
chr3128344294128344341-intron-Distal,intron-Proximal4.288113.12843K562PRPF8
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for RPN1 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for RPN1 is not available on ENCORE database.

  • 95 RBPs can affect the levels of RPN1.  








The Knockdown/knockout RNA-Seq assay for RPN1 is not available on ENCORE database.





95 RBPs can affect the gene expression of RPN1 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
RPN1ENSG00000163902.75111.130607147.75610-0.483805.076003.84040HepG2ABCF1
RPN1ENSG00000163902.76771.278505607.554700.272003.213602.38830HepG2CALR
RPN1ENSG00000163902.75046.112105886.44340-0.222204.420503.61750HepG2CKAP4
RPN1ENSG00000163902.77268.743204814.782000.594108.775407.61150HepG2CPSF6
RPN1ENSG00000163902.77496.760705885.814500.348904.174302.83090HepG2CPSF7
RPN1ENSG00000163902.72518.855203212.27920-0.350803.620002.40340HepG2CSTF2
RPN1ENSG00000163902.73187.999904852.91030-0.606205.257503.18820HepG2CSTF2T
RPN1ENSG00000163902.78869.243607212.249300.298305.405604.56150HepG2CELF1
RPN1ENSG00000163902.78579.715807754.580800.145802.485901.77790HepG2DAZAP1
RPN1ENSG00000163902.74250.524505445.56810-0.357408.245206.93860HepG2DDX19B
RPN1ENSG00000163902.73512.411805228.63560-0.574009.070507.91600HepG2DDX21
RPN1ENSG00000163902.74514.341207843.62210-0.7970012.4728011.23350HepG2DDX3X
RPN1ENSG00000163902.710226.951306738.069800.601906.662905.73800HepG2DDX6
RPN1ENSG00000163902.73706.209404801.28720-0.373504.163102.97400HepG2DHX30
RPN1ENSG00000163902.74701.773605633.35740-0.260804.420203.60050HepG2DKC1
RPN1ENSG00000163902.74433.587304934.03610-0.154302.366401.75420HepG2DNAJC2
RPN1ENSG00000163902.73303.403105421.79170-0.7148016.2238013.74060HepG2EIF2S2
RPN1ENSG00000163902.75564.990707650.67840-0.4592012.6418011.11050HepG2EIF4G1
RPN1ENSG00000163902.74839.101106191.43180-0.355503.744802.48480HepG2ESF1
RPN1ENSG00000163902.76157.286009004.91240-0.5484018.9039017.56840HepG2ETF1
RPN1ENSG00000163902.73564.800806699.70870-0.9103014.6608013.18850HepG2G3BP1
RPN1ENSG00000163902.73179.963905025.70600-0.6603012.1898010.99020HepG2HNRNPA1
RPN1ENSG00000163902.73341.385605590.16150-0.7424014.7071013.23350HepG2HNRNPC
RPN1ENSG00000163902.75532.296207142.86230-0.368608.480707.31350HepG2HNRNPF
RPN1ENSG00000163902.79816.551406784.483600.532907.597506.48450HepG2HNRNPK
RPN1ENSG00000163902.78138.475007063.721000.204204.395103.56030HepG2HNRNPL
RPN1ENSG00000163902.74055.073205553.20330-0.4536012.1987011.00020HepG2HNRNPU
RPN1ENSG00000163902.75468.121307033.65270-0.363205.290004.32100HepG2IGF2BP1
RPN1ENSG00000163902.76661.173604904.668400.441505.971504.19990HepG2NAA15
RPN1ENSG00000163902.74091.883107436.45760-0.8619013.7328012.38980HepG2NCBP2
RPN1ENSG00000163902.76449.104903594.977700.843006.578205.16490HepG2PABPC1
RPN1ENSG00000163902.75763.685606925.73620-0.265004.841804.07460HepG2PCBP1
RPN1ENSG00000163902.72791.335003315.11600-0.248102.605601.41390HepG2PKM
RPN1ENSG00000163902.74930.506507047.18820-0.5153015.6988014.59940HepG2PTBP1
RPN1ENSG00000163902.79480.225407786.455300.283903.791903.01220HepG2PUM2
RPN1ENSG00000163902.74859.934705997.53000-0.303406.758205.86820HepG2PUS1
RPN1ENSG00000163902.74010.548907632.29450-0.9283034.4662032.66330HepG2QKI
RPN1ENSG00000163902.73880.858705575.31970-0.522702.850302.13600HepG2RAVER1
RPN1ENSG00000163902.76971.873108108.40890-0.217902.361001.56210HepG2RBM15
RPN1ENSG00000163902.75486.757107526.39070-0.4560010.723009.84940HepG2RBM22
RPN1ENSG00000163902.73574.696404781.86110-0.419803.587602.37910HepG2RCC2
RPN1ENSG00000163902.74889.145307842.85000-0.6818027.1795025.84080HepG2NELFE
RPN1ENSG00000163902.74906.697707304.53780-0.5740020.2096018.80330HepG2RECQL
RPN1ENSG00000163902.74406.544307695.02500-0.8043017.5790016.14880HepG2RPLP0
RPN1ENSG00000163902.73320.552803900.86000-0.232402.070601.53250HepG2RPS19
RPN1ENSG00000163902.74131.154805430.70250-0.394604.411003.41330HepG2RPS2
RPN1ENSG00000163902.77633.582504945.377400.6262028.8419027.07230HepG2SAFB2
RPN1ENSG00000163902.79319.129707481.219800.316801.928501.36270HepG2SF3A3
RPN1ENSG00000163902.75304.074007337.04570-0.4681013.9270012.75860HepG2SF3B4
RPN1ENSG00000163902.76152.181008500.69330-0.4665016.6570015.70030HepG2SRFBP1
RPN1ENSG00000163902.76215.321107658.28190-0.301207.032506.36160HepG2SRSF1
RPN1ENSG00000163902.74761.772307017.72140-0.5595018.6980017.18040HepG2SRSF7
RPN1ENSG00000163902.74496.916706230.41560-0.4704014.4573013.37400HepG2SRSF9
RPN1ENSG00000163902.74704.564507380.46060-0.6496026.9488025.71910HepG2SSB
RPN1ENSG00000163902.76989.154108242.47060-0.238004.978404.18630HepG2SUCLG1
RPN1ENSG00000163902.76620.927204873.123600.442106.435005.03870HepG2SUPT6H
RPN1ENSG00000163902.73652.195205090.82650-0.479105.079704.20770HepG2SUPV3L1
RPN1ENSG00000163902.76023.420206883.54740-0.192602.148801.64310HepG2TAF15
RPN1ENSG00000163902.76449.383105077.320200.345003.430902.63350HepG2TARDBP
RPN1ENSG00000163902.73719.409006325.05820-0.7660019.0274016.90830HepG2TIA1
RPN1ENSG00000163902.72921.372005396.00180-0.8852027.0670025.79940HepG2TIAL1
RPN1ENSG00000163902.73819.633405444.20900-0.5113015.1087013.94020HepG2TRIM56
RPN1ENSG00000163902.72472.443903007.08580-0.282402.175801.50230HepG2UCHL5
RPN1ENSG00000163902.78108.372006634.697700.289306.333705.34830HepG2UPF1
RPN1ENSG00000163902.77539.658206405.540600.235104.306403.58510HepG2UTP3
RPN1ENSG00000163902.73680.837205011.37020-0.445205.152604.17140HepG2XRN2
RPN1ENSG00000163902.72014.261904983.57690-1.30690102.1537099.41180HepG2ZC3H8
RPN1ENSG00000163902.73440.001407296.89810-1.0849093.7825091.82010HepG2ZNF622
RPN1ENSG00000163902.79126.353406142.497900.5711018.7708017.41560K562AGGF1
RPN1ENSG00000163902.78384.504406750.051000.312703.433202.31170K562AKAP8
RPN1ENSG00000163902.79185.547806391.639600.523108.354007.15700K562AKAP8L
RPN1ENSG00000163902.74902.692706064.86940-0.306902.818702.22550K562AQR
RPN1ENSG00000163902.79167.055706706.542500.450805.022203.75110K562ATP5C1
RPN1ENSG00000163902.74652.317503853.410500.271703.637601.54820K562DDX24
RPN1ENSG00000163902.74505.382905837.45130-0.373707.970206.94160K562DDX47
RPN1ENSG00000163902.710378.996306877.284700.5937011.286409.27980K562DKC1
RPN1ENSG00000163902.72812.554702394.101200.232302.447501.69750K562EIF3G
RPN1ENSG00000163902.75892.804007418.22750-0.332106.420805.01210K562EIF4G2
RPN1ENSG00000163902.74159.474103316.645000.326604.773402.99600K562EWSR1
RPN1ENSG00000163902.72688.378303543.76570-0.398504.047503.00900K562FMR1
RPN1ENSG00000163902.72317.364203003.61380-0.374203.109202.13440K562FTO
RPN1ENSG00000163902.71719.026703862.41370-1.1679035.3546033.29980K562HNRNPC
RPN1ENSG00000163902.72718.305703449.08350-0.343503.631302.30820K562HNRNPF
RPN1ENSG00000163902.74276.872603337.962300.357502.748301.82260K562HNRNPM
RPN1ENSG00000163902.76764.700905502.182300.297902.599001.82620K562HSPD1
RPN1ENSG00000163902.74759.090103636.782100.387902.870101.82120K562IGF2BP2
RPN1ENSG00000163902.78435.911606782.804400.314604.020903.00170K562KIF1C
RPN1ENSG00000163902.79053.805006493.074600.479505.619803.90320K562MAK16
RPN1ENSG00000163902.710090.836107598.499200.409203.583902.52880K562MBNL1
RPN1ENSG00000163902.74033.519804672.02720-0.212003.312602.43110K562MTPAP
RPN1ENSG00000163902.77446.326005326.026000.483404.031702.90950K562NAA15
RPN1ENSG00000163902.74496.447905190.96600-0.207204.712103.77260K562NSUN2
RPN1ENSG00000163902.76736.716204515.134300.577202.575301.62870K562PABPN1
RPN1ENSG00000163902.73600.811104470.34680-0.312102.331201.56780K562PCBP3
RPN1ENSG00000163902.72919.341803428.99510-0.232102.082601.38760K562POLR2G
RPN1ENSG00000163902.77181.068508435.06640-0.232203.403902.33670K562PUM2
RPN1ENSG00000163902.710241.336606338.094700.6922012.7778011.65630K562PUS1
RPN1ENSG00000163902.79274.353106176.063700.5865016.0258014.58340K562RBM15
RPN1ENSG00000163902.72663.615903747.04230-0.492405.397303.80160K562NELFE
RPN1ENSG00000163902.72751.107702357.997500.222402.997101.33430K562RPS10
RPN1ENSG00000163902.77276.087704129.192400.817203.656702.21120K562SF1
RPN1ENSG00000163902.72904.975002469.559500.234202.697201.44040K562SSB
RPN1ENSG00000163902.72651.385003330.87710-0.329202.537801.64550K562TIAL1
RPN1ENSG00000163902.74003.169103180.797700.331702.299401.31460K562U2AF1
RPN1ENSG00000163902.73834.461703285.613900.222802.059601.36690K562U2AF2
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for RPN1 is not available on ENCORE database.





5 RBPs can affect the splicing of RPN1 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SERPN1ENSG00000163902.7chr3-128348793128349029128345575128345675128350790128351000-0.051000.000000.00002excludedK562AQR
SERPN1ENSG00000163902.7chr3-1283633771283634891283568801283569481283637611283638260.076000.000000.00000includedK562HNRNPC
MXERPN1ENSG00000163902.7chr3-1283507901283510001283566411283569481283487931283489861283637611283638260.138000.000000.000011includedHepG2U2AF2
MXERPN1ENSG00000163902.7chr3-1283507901283510001283566411283569481283487931283489861283637611283638260.086000.003500.080851includedHepG2RBFOX2
MXERPN1ENSG00000163902.7chr3-1283507901283510001283566411283569481283487931283489861283637611283638260.088000.001700.027911includedHepG2HNRNPUL1

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for RPN1 is not avaliable on ENCORE database.