RP3-368A4.5

General Information

Gene Name       : RP3-368A4.5
Gene ID             :
Essential Gene : No

Functions

Localization

Domains (AlphaFold: RP3-368A4.5)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for RP3-368A4.5 is not avaliable on ENCORE database.



Proteins bound to RNA
  • RP3-368A4.5 RNA is bound by 30 proteins.  







eCLIP assay for RP3-368A4.5 is not avaliable on ENCORE database.





30 proteins are bound to RP3-368A4.5 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chrX7346036473460441-intron-Distal3.028773.70277HepG2CSTF2T
chrX7343078173430854-intron-Distal3.693687.74116HepG2KHSRP
chrX7345697073457025-intron-Distal3.499635.31375HepG2ILF3
chrX7343781873437850-intron-Distal3.620924.95815HepG2DROSHA
chrX7343025273430292-intron-Distal3.480724.28919HepG2KHSRP
chrX7342119973421251-intron-Distal5.4090512.25749HepG2ILF3
chrX7342989373429943-intron-Distal3.5668713.46566HepG2U2AF2
chrX7344063173440709-intron-Distal3.537495.45916HepG2TAF15
chrX7345004573450129-intron-Distal3.261973.84021HepG2HNRNPM
chrX7345265173452779-intron-Distal3.416468.54122K562KHSRP
chrX7342147673421538-intron-Distal4.498055.58899HepG2ILF3
chrX7344236373442434-intron-Distal5.5236635.79018K562PTBP1
chrX7344996373449996-intron-Distal3.381214.35402HepG2SUGP2
chrX7346035773460436-intron-Distal3.001294.93220HepG2TAF15
chrX7342174873421805-intron-Distal4.4305810.84082HepG2ILF3
chrX7343821073438256-intron-Distal5.2841516.87440HepG2DGCR8
chrX7343385273433925-intron-Distal3.045974.81073HepG2MATR3
chrX7345818073458213-intron-Distal4.679476.39685HepG2CSTF2
chrX7342460073424646-intron-Distal3.929874.02157HepG2SAFB
chrX7343804573438122-intron-Distal3.695657.34094HepG2DGCR8
chrX7343802773438119-intron-Distal4.7354612.27140K562DGCR8
chrX7343842173438557-intron-Distal3.633328.28612HepG2GRWD1
chrX7342337473423400-intron-Distal3.349564.56843HepG2HLTF
chrX7344780873447821-intron-Distal4.968777.32421HepG2HNRNPC
chrX7342829273428356-intron-Distal3.707153.00349HepG2ILF3
chrX7344440173444426-intron-Distal3.126693.88746HepG2U2AF1
chrX7345096373451037-intron-Distal3.969535.69494HepG2FUBP3
chrX7346002273460110-intron-Distal3.3396310.76533HepG2SFPQ
chrX7342134573421548-intron-Distal3.638553.24603K562KHSRP
chrX7342381973423869-intron-Distal4.0863712.62414HepG2U2AF2
chrX7345740073457439-intron-Distal3.6102142.42199HepG2XPO5
chrX7345962773459671-intron-Distal3.095034.64228HepG2KHSRP
chrX7343832573438358-intron-Distal3.187603.85490HepG2DGCR8
chrX7345307773453122-intron-Distal4.437634.31871HepG2HNRNPM
chrX7345102873451085-intron-Distal3.689527.11758HepG2QKI
chrX7343817173438257-intron-Distal7.6823248.33702K562DGCR8
chrX7345294373453025-intron-Distal3.274408.59650HepG2HNRNPM
chrX7343844573438510-intron-Distal4.104279.83750HepG2DGCR8
chrX7342938873429453-intron-Distal3.510073.90086HepG2KHSRP
chrX7345003273450164-intron-Distal3.839307.74116HepG2KHSRP
chrX7343849973438564-intron-Distal3.8999714.85316HepG2U2AF2
chrX7346050573460537-intron-Distal4.060063.83958HepG2QKI
chrX7343844473438508-intron-Distal3.149876.23785HepG2DROSHA
chrX7344590273446023-intron-Distal3.177685.98214HepG2HNRNPL
chrX7346036173460434-intron-Distal3.007224.11950HepG2GTF2F1
chrX7343815173438199-intron-Distal3.349875.04396HepG2DGCR8
chrX7344727573447315-intron-Distal4.048146.35518HepG2HNRNPC
chrX7345554373455602-intron-Distal3.338843.54181HepG2SFPQ
chrX7342256873422647-intron-Distal3.659893.63043HepG2GRWD1
chrX7343775873437860-intron-Distal3.529727.87324HepG2RBFOX2
chrX7342804473428146-intron-Distal3.657786.06343HepG2ILF3
chrX7343078673430842-intron-Distal3.964703.06150K562KHSRP
chrX7345890473458994-intron-Distal3.149963.65151HepG2TAF15
chrX7343856473438668-intron-Distal5.0663065.66728HepG2U2AF2
chrX7345995973460100-intron-Distal3.396707.99883HepG2FUS
chrX7346139173461462-intron-Distal3.331678.04091HepG2QKI
chrX7343791673437968-intron-Distal3.335325.23245HepG2DROSHA
chrX7342360273423656-intron-Distal3.277345.40232HepG2U2AF2
chrX7343186073431982-intron-Distal4.210574.79379K562KHSRP
chrX7344376173443818-intron-Distal3.841505.81571HepG2HNRNPC
chrX7344621673446295-intron-Distal3.021323.29251K562KHSRP
chrX7344998773450149-intron-Distal3.6235711.47524K562KHSRP
chrX7345821373458282-intron-Distal4.092468.43268HepG2CSTF2
chrX7343851073438571-intron-Distal3.495695.15317HepG2DGCR8
chrX7343029073430370-intron-Distal3.620295.56048K562KHSRP
chrX7342374873423802-intron-Distal3.700343.23382HepG2U2AF1
chrX7343791973437965-intron-Distal6.1407315.06833K562DGCR8
chrX7345963173459668-intron-Distal3.170823.00392HepG2FUS
chrX7344987373449928-intron-Distal3.901583.26999K562KHSRP
chrX7342967773429780-intron-Distal4.114778.42346HepG2CSTF2
chrX7345221273452281-intron-Distal3.046026.72795HepG2HNRNPC
chrX7343828173438355-intron-Distal4.8497713.69108K562DGCR8
chrX7344437973444426-intron-Distal4.3618314.87374HepG2U2AF2
chrX7343986773439974-intron-Distal3.253416.29887HepG2KHSRP
chrX7344162773441685-intron-Distal3.619904.19942HepG2HNRNPC
chrX7345035273450443-intron-Distal3.027993.52519HepG2HNRNPC
chrX7343853173438568-intron-Distal3.665145.13416HepG2DROSHA
chrX7343827873438325-intron-Distal3.319805.33026HepG2DGCR8
chrX7343781073437883-intron-Distal4.396565.68841K562KHSRP
chrX7342270073422792-intron-Distal4.325374.46921K562RBM15
chrX7344398373444118-intron-Distal3.7213012.53363K562KHSRP
chrX7343827773438383-intron-Distal3.202779.02011HepG2DROSHA
chrX7343775673437818-intron-Distal3.129006.65823HepG2DROSHA
chrX7343816673438218-intron-Distal4.058034.85687K562DROSHA
chrX7344987473449936-intron-Distal5.616379.61927HepG2U2AF2
chrX7342243473422525-intron-Distal3.204833.70624HepG2HNRNPK
chrX7345828273458366-intron-Distal6.3631447.84100HepG2CSTF2
chrX7343601073436103-intron-Distal4.351994.72426K562LIN28B
chrX7343844173438558-intron-Distal4.3934010.93593HepG2SRSF1
chrX7344677673446859-intron-Distal3.128873.73266K562KHSRP
chrX7345958773459661-intron-Distal4.096139.80030HepG2SFPQ
chrX7344438273444401-intron-Distal4.105154.52938HepG2U2AF1
chrX7344976173449818-intron-Distal4.552385.37406HepG2HNRNPM
chrX7345833373458377-intron-Distal7.5031818.86116K562FMR1
chrX7345832673458379-intron-Distal4.1767222.46911K562CSTF2T
chrX7344238073442429-intron-Distal3.016614.57695HepG2U2AF2
chrX7343602473436097-intron-Distal5.200409.31998HepG2LIN28B
chrX7342575973425792-intron-Distal4.525554.86595HepG2CSTF2
chrX7344782173447860-intron-Distal4.086177.38558HepG2HNRNPC
chrX7343850173438566-intron-Distal3.691046.18296HepG2U2AF1
chrX7346124573461336-intron-Distal3.8161912.92060HepG2QKI
chrX7345833173458379-intron-Distal4.8034345.28951HepG2CSTF2T
chrX7344236373442436-intron-Distal3.9234018.17546HepG2PTBP1
chrX7344457973444666-intron-Distal4.962788.49499K562KHSRP
chrX7343877773438831-intron-Distal3.6515713.75825HepG2U2AF2
chrX7343776473437821-intron-Distal3.880948.08805K562DGCR8
chrX7344605373446114-intron-Distal3.037525.14637HepG2QKI
chrX7343828573438325-intron-Distal4.096447.17209K562DROSHA
chrX7343804873438124-intron-Distal3.206226.52669HepG2DROSHA
chrX7344726673447275-intron-Distal4.493263.43813HepG2HNRNPC
chrX7344245173442499-intron-Distal3.815357.04020HepG2PTBP1
chrX7342571473425759-intron-Distal4.167568.62887HepG2CSTF2
chrX7343858273438662-intron-Distal4.575145.80103HepG2U2AF1
chrX7345518873455308-intron-Distal3.047647.92632HepG2HNRNPM
chrX7342112373421169-intron-Distal4.248644.50495HepG2ILF3
chrX7346196173462038-intron-Distal,intron-Proximal3.335435.88747HepG2HNRNPL
chrX7342951573429558-intron-Distal3.562293.05863HepG2CSTF2
chrX7343832573438377-intron-Distal5.118879.56767K562DROSHA
chrX7345836673458382-intron-Distal7.0301238.76682HepG2CSTF2
chrX7344510473445175-intron-Distal3.048885.71316HepG2HNRNPC
chrX7344860973448711-intron-Distal4.758716.80456K562KHSRP
chrX7346002573460095-intron-Distal3.502269.30501HepG2KHSRP
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for RP3-368A4.5 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for RP3-368A4.5 is not available on ENCORE database.

  • 90 RBPs can affect the levels of RP3-368A4.5.  








The Knockdown/knockout RNA-Seq assay for RP3-368A4.5 is not available on ENCORE database.





90 RBPs can affect the gene expression of RP3-368A4.5 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
RP3-368A4.5ENSG00000271430.1255.47070388.04920-0.603104.643303.89400HepG2ACO1
RP3-368A4.5ENSG00000271430.1134.00290391.26170-1.5459013.7035012.61170HepG2AKAP1
RP3-368A4.5ENSG00000271430.1386.53370632.66050-0.710805.347303.91650HepG2AKAP8
RP3-368A4.5ENSG00000271430.1560.89850368.983500.604104.624402.85210HepG2ATP5C1
RP3-368A4.5ENSG00000271430.1771.78940508.922400.600707.717006.66290HepG2AUH
RP3-368A4.5ENSG00000271430.1365.36430271.360500.429002.247301.43760HepG2BCLAF1
RP3-368A4.5ENSG00000271430.1527.67870402.143000.391902.529801.79080HepG2CALR
RP3-368A4.5ENSG00000271430.1298.26700429.32950-0.525502.474101.55870HepG2CCAR1
RP3-368A4.5ENSG00000271430.1983.85160601.083400.710803.096302.28360HepG2CNOT7
RP3-368A4.5ENSG00000271430.1466.90850312.146000.580803.794403.00170HepG2CPSF6
RP3-368A4.5ENSG00000271430.1521.75690336.723300.631705.009003.54590HepG2CPSF7
RP3-368A4.5ENSG00000271430.1749.99940492.179100.607607.297006.34720HepG2CELF1
RP3-368A4.5ENSG00000271430.1794.55900529.248200.586108.538007.34510HepG2DAZAP1
RP3-368A4.5ENSG00000271430.1316.05450237.564100.411802.176501.54490HepG2DNAJC21
RP3-368A4.5ENSG00000271430.1450.38930295.472200.608003.437002.19400HepG2AGO1
RP3-368A4.5ENSG00000271430.1592.83410309.505500.937608.688107.67530HepG2EIF2S1
RP3-368A4.5ENSG00000271430.1716.26900333.027001.104806.433805.41650HepG2EIF4B
RP3-368A4.5ENSG00000271430.1775.57630584.317600.408404.056803.35310HepG2ETF1
RP3-368A4.5ENSG00000271430.1461.34780305.653700.593904.422903.02830HepG2FASTKD2
RP3-368A4.5ENSG00000271430.1357.34470255.539000.483702.711101.45760HepG2FKBP4
RP3-368A4.5ENSG00000271430.1341.01690495.11580-0.537903.262701.45920HepG2FMR1
RP3-368A4.5ENSG00000271430.1806.85020312.677701.367504.922203.57350HepG2FTO
RP3-368A4.5ENSG00000271430.1421.01690174.204201.2730013.5391011.85980HepG2FUBP3
RP3-368A4.5ENSG00000271430.1806.82570320.135501.3335018.1712016.54180HepG2G3BP1
RP3-368A4.5ENSG00000271430.1554.50740339.871800.706105.416304.15610HepG2G3BP2
RP3-368A4.5ENSG00000271430.1552.03050324.178600.767906.383905.35350HepG2HNRNPK
RP3-368A4.5ENSG00000271430.1528.48850325.408800.699503.238202.51410HepG2IGF2BP2
RP3-368A4.5ENSG00000271430.1613.94890305.389801.007403.761602.61170HepG2IGF2BP3
RP3-368A4.5ENSG00000271430.1664.55890327.309201.021608.769606.89770HepG2KHSRP
RP3-368A4.5ENSG00000271430.1434.68960334.153100.379402.049101.34740HepG2MSI2
RP3-368A4.5ENSG00000271430.1524.71400355.338100.562203.394002.69550HepG2NCBP2
RP3-368A4.5ENSG00000271430.1491.79410299.416100.715805.198804.18710HepG2NSUN2
RP3-368A4.5ENSG00000271430.1708.00540316.445601.1617013.9598012.36880HepG2PABPC4
RP3-368A4.5ENSG00000271430.1373.47040262.322100.509603.522002.57750HepG2PARN
RP3-368A4.5ENSG00000271430.1462.40250293.052200.657906.348405.48770HepG2PCBP1
RP3-368A4.5ENSG00000271430.1466.69410298.192600.646105.997705.25500HepG2PTBP1
RP3-368A4.5ENSG00000271430.1337.98350500.95740-0.567704.222203.50370HepG2PUF60
RP3-368A4.5ENSG00000271430.1336.94430531.39570-0.657305.997105.02220HepG2PUM2
RP3-368A4.5ENSG00000271430.1593.58690322.947800.8781010.283109.18580HepG2QKI
RP3-368A4.5ENSG00000271430.1286.65680417.44370-0.542301.993301.38520HepG2RAVER1
RP3-368A4.5ENSG00000271430.1890.60810488.380000.8667013.6460012.66980HepG2RBM22
RP3-368A4.5ENSG00000271430.1724.99670293.096701.3065021.4629019.69080HepG2RBM25
RP3-368A4.5ENSG00000271430.1450.82480309.083000.544504.255803.51320HepG2RECQL
RP3-368A4.5ENSG00000271430.1440.04370234.395400.908607.144405.94950HepG2RRP9
RP3-368A4.5ENSG00000271430.1375.60020236.003500.670305.866804.98370HepG2SAFB2
RP3-368A4.5ENSG00000271430.1380.75660576.29910-0.597902.671802.00980HepG2SF3A3
RP3-368A4.5ENSG00000271430.1573.87610310.455200.8863011.1984010.13230HepG2SF3B4
RP3-368A4.5ENSG00000271430.1786.08690551.604800.511006.165105.49890HepG2SRFBP1
RP3-368A4.5ENSG00000271430.1230.28370324.04870-0.492802.684902.21760HepG2SRSF1
RP3-368A4.5ENSG00000271430.1590.25830359.636800.714704.670903.33710HepG2SRSF3
RP3-368A4.5ENSG00000271430.1432.18020248.526800.798108.488007.38400HepG2SRSF7
RP3-368A4.5ENSG00000271430.1716.44260263.631601.4422034.6673033.13520HepG2SRSF9
RP3-368A4.5ENSG00000271430.1667.87200478.919400.479705.040904.38930HepG2SSB
RP3-368A4.5ENSG00000271430.1293.10330562.51820-0.9405013.9602012.74200HepG2SUCLG1
RP3-368A4.5ENSG00000271430.1487.20510291.269700.742107.292306.45720HepG2TAF15
RP3-368A4.5ENSG00000271430.1630.90260329.123400.9387010.104008.84550HepG2TARDBP
RP3-368A4.5ENSG00000271430.1410.41070674.12650-0.716002.888801.79920HepG2TBRG4
RP3-368A4.5ENSG00000271430.1322.44950204.873900.654203.817902.66650HepG2TFIP11
RP3-368A4.5ENSG00000271430.1486.82030267.635000.863004.808803.71620HepG2TIA1
RP3-368A4.5ENSG00000271430.1376.94210259.798500.536804.230903.56260HepG2TRIM56
RP3-368A4.5ENSG00000271430.1533.71490353.177700.595604.044403.29050HepG2U2AF1
RP3-368A4.5ENSG00000271430.1817.40900518.005500.658004.838603.71290HepG2UBE2L3
RP3-368A4.5ENSG00000271430.1370.79350180.569101.038009.565208.15680HepG2UCHL5
RP3-368A4.5ENSG00000271430.1633.74850511.087100.310202.374301.71940HepG2UPF1
RP3-368A4.5ENSG00000271430.1304.22810493.43780-0.697707.348706.44970HepG2UTP3
RP3-368A4.5ENSG00000271430.1225.95240458.98330-1.022405.257503.82010HepG2XRCC6
RP3-368A4.5ENSG00000271430.1187.66460300.85350-0.680902.293801.62780HepG2XRN2
RP3-368A4.5ENSG00000271430.1486.84430318.212100.613406.221605.27880HepG2ZC3H8
RP3-368A4.5ENSG00000271430.1741.67500562.101000.399904.430703.78110HepG2ZNF622
RP3-368A4.5ENSG00000271430.1592.85390416.889000.507902.698701.42350HepG2ZRANB2
RP3-368A4.5ENSG00000271430.1374.96490238.900400.650203.857402.38870K562ABCF1
RP3-368A4.5ENSG00000271430.161.48590152.33380-1.308907.001906.15830K562AGGF1
RP3-368A4.5ENSG00000271430.182.02000158.50480-0.950504.436703.60260K562AKAP8L
RP3-368A4.5ENSG00000271430.1277.65570211.312000.393801.947601.38280K562DDX47
RP3-368A4.5ENSG00000271430.1238.29020170.596200.482002.132401.37500K562DKC1
RP3-368A4.5ENSG00000271430.1170.1106095.962900.825803.047101.96040K562EIF3D
RP3-368A4.5ENSG00000271430.1103.85620171.69860-0.725303.086502.18770K562FIP1L1
RP3-368A4.5ENSG00000271430.1129.7690072.526700.839302.832702.11470K562G3BP2
RP3-368A4.5ENSG00000271430.132.8154071.89350-1.131502.752402.15720K562HNRNPC
RP3-368A4.5ENSG00000271430.1106.89390168.23210-0.654302.320801.57400K562KIF1C
RP3-368A4.5ENSG00000271430.1101.09350161.02420-0.671602.310801.35740K562MAK16
RP3-368A4.5ENSG00000271430.1115.16170188.45980-0.710603.484502.44640K562MBNL1
RP3-368A4.5ENSG00000271430.156.66030132.09500-1.221204.365103.17980K562NAA15
RP3-368A4.5ENSG00000271430.134.2229088.40360-1.369103.801202.22670K562NONO
RP3-368A4.5ENSG00000271430.1123.61220194.88740-0.656802.956102.10420K562PPIG
RP3-368A4.5ENSG00000271430.146.5307087.24260-0.906902.295901.61010K562PRPF8
RP3-368A4.5ENSG00000271430.149.75740108.33050-1.122504.683303.84180K562PTBP1
RP3-368A4.5ENSG00000271430.1352.27970234.096100.589502.940102.09860K562PUF60
RP3-368A4.5ENSG00000271430.164.97760157.23170-1.274905.909005.15220K562PUS1
RP3-368A4.5ENSG00000271430.181.70990153.16680-0.906504.113403.40700K562RBM15
RP3-368A4.5ENSG00000271430.145.17430105.94380-1.229703.278701.81180K562SFPQ
RP3-368A4.5ENSG00000271430.153.95300106.19090-0.976903.263802.49970K562SRSF1
RP3-368A4.5ENSG00000271430.1156.5688072.618101.108304.876703.81230K562U2AF2
RP3-368A4.5ENSG00000271430.1201.45720131.678900.613303.046302.15890K562WDR43
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for RP3-368A4.5 is not available on ENCORE database.






No RBPs affect the alternative splcing events of RP3-368A4.5 on ENCORE database.





The Knockdown/knockout RNA-Seq assay for RP3-368A4.5 is not avaliable on ENCORE database.