RABGAP1L

General Information

Gene Name : RABGAP1L
Gene ID : ENSG00000152061.23
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: RABGAP1L)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	RABGAP1L	ENSG00000152061.23	116.36	96.90	106.63	ENCSR000AEF
HepG2	RABGAP1L	ENSG00000152061.23	5.28	6.81	6.04	ENCSR985KAT
K562	RABGAP1L	ENSG00000152061.23	15.62	17.20	16.41	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for RABGAP1L is not avaliable on ENCORE database.

Proteins bound to RNA

RABGAP1L RNA is bound by 37 proteins.

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eCLIP assay for RABGAP1L is not avaliable on ENCORE database.

37 proteins are bound to RABGAP1L RNA:

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Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr1	174380502	174380588	+	intron-Distal	5.31055	27.77033	K562	EXOSC5
chr1	174173092	174173146	+	intron-Distal	6.81747	27.73925	K562	EXOSC5
chr1	174381022	174381088	+	intron-Distal	5.68491	24.69856	K562	EXOSC5
chr1	174287748	174287838	+	intron-Distal	6.96847	24.47947	K562	PTBP1
chr1	174380720	174380808	+	intron-Distal	5.71294	24.03221	K562	EXOSC5
chr1	174380122	174380193	+	intron-Distal	6.49693	22.69215	K562	EXOSC5
chr1	174380594	174380677	+	intron-Distal	6.45993	22.69215	K562	EXOSC5
chr1	174380280	174380330	+	intron-Distal	4.78124	22.43880	K562	EXOSC5
chr1	174381706	174381773	+	intron-Distal	5.38802	19.73896	K562	EXOSC5
chr1	174454655	174454756	+	intron-Distal	4.70445	16.70120	K562	EXOSC5
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 276 entries

eCLIP assay for RABGAP1L is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for RABGAP1L is not available on ENCORE database.
89 RBPs can affect the levels of RABGAP1L.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for RABGAP1L is not available on ENCORE database.

89 RBPs can affect the gene expression of RABGAP1L :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
RABGAP1L	ENSG00000152061.17	499.27300	1084.58210	-1.11920	23.69130	22.03720	K562	FXR1
RABGAP1L	ENSG00000152061.17	813.36390	341.89330	1.25030	18.89800	17.22720	HepG2	SF3B1
RABGAP1L	ENSG00000152061.17	777.99150	345.40340	1.17140	15.36360	14.04580	HepG2	HNRNPLL
RABGAP1L	ENSG00000152061.17	1018.65940	1585.88630	-0.63860	12.97920	11.67660	K562	DDX47
RABGAP1L	ENSG00000152061.17	1742.74940	1089.44910	0.67770	11.76610	10.09560	K562	U2AF2
RABGAP1L	ENSG00000152061.17	973.16500	585.40420	0.73320	10.57320	9.46540	HepG2	QKI
RABGAP1L	ENSG00000152061.17	586.27330	335.49090	0.80520	10.40040	9.03950	HepG2	PRPF4
RABGAP1L	ENSG00000152061.17	812.24700	1291.17080	-0.66870	9.83380	8.63780	K562	PTBP1
RABGAP1L	ENSG00000152061.17	400.80400	787.43500	-0.97430	10.32650	8.27580	K562	HNRNPM
RABGAP1L	ENSG00000152061.17	514.60080	858.26350	-0.73800	9.70180	8.15740	K562	SYNCRIP
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 106 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for RABGAP1L is not available on ENCORE database.

14 RBPs can affect the splicing of RABGAP1L :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
SE	RABGAP1L	ENSG00000152061.17	chr1	+	174846529	174846743	174780969	174781098	174926593	174926686	0.41700	0.00000	0.00000	included	K562	SRSF1
SE	RABGAP1L	ENSG00000152061.17	chr1	+	174927027	174927205	174926593	174926686	174938413	174938524	0.52800	0.00000	0.00000	included	HepG2	U2AF1
SE	RABGAP1L	ENSG00000152061.17	chr1	+	174846529	174846743	174780969	174781098	174926593	174926686	-0.25800	0.00000	0.00094	excluded	K562	LARP4
SE	RABGAP1L	ENSG00000152061.17	chr1	+	174927027	174927310	174926593	174926686	174938413	174938524	-0.21600	0.00000	0.00001	excluded	K562	HNRNPUL1
SE	RABGAP1L	ENSG00000152061.17	chr1	+	174846529	174846743	174780969	174781098	174926593	174926686	-0.38100	0.00003	0.00244	excluded	K562	FXR1
SE	RABGAP1L	ENSG00000152061.17	chr1	+	174927027	174927310	174926593	174926686	174938413	174938524	-0.26200	0.00042	0.02347	excluded	K562	HNRNPK
SE	RABGAP1L	ENSG00000152061.17	chr1	+	174846529	174846743	174780969	174781098	174926593	174926686	0.26800	0.00048	0.07118	included	K562	MATR3
SE	RABGAP1L	ENSG00000152061.17	chr1	+	174244617	174244719	174241551	174241618	174244970	174245073	0.25800	0.00056	0.09312	included	K562	SBDS
SE	RABGAP1L	ENSG00000152061.17	chr1	+	174927027	174927310	174926593	174926686	174938413	174938524	0.39700	0.00075	0.02996	included	K562	PRPF8
SE	RABGAP1L	ENSG00000152061.17	chr1	+	174846529	174846743	174780969	174781098	174926593	174926686	0.20200	0.00093	0.05983	included	K562	HNRNPL

Showing 1 to 10 of 20 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

RABGAP1L

General Information

Functions

Localization

Domains (AlphaFold: RABGAP1L)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for RABGAP1L is not avaliable on ENCORE database.

37 proteins are bound to RABGAP1L RNA:

eCLIP assay for RABGAP1L is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for RABGAP1L is not available on ENCORE database.

89 RBPs can affect the gene expression of RABGAP1L :

The Knockdown/knockout RNA-Seq assay for RABGAP1L is not available on ENCORE database.

14 RBPs can affect the splicing of RABGAP1L :

The Knockdown/knockout RNA-Seq assay for RABGAP1L is not avaliable on ENCORE database.