PSMA7

General Information

Gene Name       : PSMA7
Gene ID             : ENSG00000101182.14
Essential Gene : Yes

Functions

Localization

Domains (AlphaFold: PSMA7)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878PSMA7ENSG00000101182.1482.83148.81115.82ENCSR000AEF
HepG2PSMA7ENSG00000101182.14567.01342.82454.91ENCSR985KAT
K562PSMA7ENSG00000101182.14257.16172.81214.99ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for PSMA7 is not avaliable on ENCORE database.



Proteins bound to RNA
  • PSMA7 RNA is bound by 30 proteins.  







eCLIP assay for PSMA7 is not avaliable on ENCORE database.





30 proteins are bound to PSMA7 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr206071185760711873-3'-UTR,intron-Distal,intron-Proximal3.538917.55782K562ZNF622
chr206071181760711887-3'-UTR,intron-Distal,intron-Proximal4.3919614.04085K562CPSF6
chr206071183560711877-3'-UTR,intron-Distal,intron-Proximal3.386524.28120HepG2AGGF1
chr206071191060711992-3'-UTR,CDS,intron-Distal,intron-Proximal4.1117113.55558HepG2TRA2A
chr206071180360711831-3'-UTR,intron-Distal,intron-Proximal4.5795820.28125HepG2LARP4
chr206071191160712007-3'-UTR,CDS,intron-Distal,intron-Proximal3.5268110.75619K562CPSF6
chr206071191260711984-3'-UTR,CDS,intron-Distal,intron-Proximal3.034783.72303HepG2FXR2
chr206071470560714765-3'-UTR,CDS,intron-Distal,intron-Proximal4.288116.35873K562PRPF8
chr206071472360714777-3'-UTR,CDS,intron-Distal,intron-Proximal4.6879918.14584HepG2PRPF8
chr206071182760711881-3'-UTR,intron-Distal,intron-Proximal3.5318310.22030HepG2GRWD1
chr206071472860714743-3'-UTR,CDS,intron-Distal,intron-Proximal3.916114.98250K562AQR
chr206071180560711878-3'-UTR,intron-Distal,intron-Proximal5.288985.89618HepG2TIA1
chr206071434360714465-3'-UTR,intron-Distal,intron-Proximal3.709774.79415HepG2KHSRP
chr206071190760711997-3'-UTR,CDS,intron-Distal,intron-Proximal5.5931439.05866HepG2BCLAF1
chr206071181860711870-3'-UTR,intron-Distal,intron-Proximal3.441498.82524K562LARP4
chr206071183160711882-3'-UTR,intron-Distal,intron-Proximal4.3468138.19944HepG2LARP4
chr206071182460711885-3'-UTR,intron-Distal,intron-Proximal4.2680043.70388HepG2BCLAF1
chr206071183060711855-3'-UTR,intron-Distal,intron-Proximal3.5304827.18800K562PABPC4
chr206071183560711857-3'-UTR,intron-Distal,intron-Proximal3.328127.60260K562ZNF622
chr206071180160711830-3'-UTR,intron-Distal,intron-Proximal3.7470512.21651K562PABPC4
chr206071595660715981-5'-UTR,CDS,intron-Distal4.1780419.83203HepG2GRWD1
chr206071587360715905-5'-UTR,CDS,intron-Distal,intron-Proximal3.025496.22816HepG2LARP4
chr206071592860715933-5'-UTR,CDS,intron-Distal3.6308213.13340HepG2GRWD1
chr206071593260715976-5'-UTR,CDS,intron-Distal3.8994432.50530K562DDX3X
chr206071591760715975-5'-UTR,CDS,intron-Distal3.1477023.15719HepG2BCLAF1
chr206071829760718403-5'-UTR,CDS,intron-Distal4.24826400.00000HepG2DDX3X
chr206071592060715928-5'-UTR,CDS,intron-Distal3.5058910.44975HepG2GRWD1
chr206071588360715916-5'-UTR,CDS,intron-Distal3.058787.63399HepG2ZNF800
chr206071591260715978-5'-UTR,CDS,intron-Distal3.293229.62615K562ZNF800
chr206071592360715953-5'-UTR,CDS,intron-Distal3.047114.79980HepG2UCHL5
chr206071591760715982-5'-UTR,CDS,intron-Distal3.2756622.11910K562ZNF622
chr206071587560715920-5'-UTR,CDS,intron-Distal4.1697723.44302HepG2GRWD1
chr206071597660716000-5'-UTR,CDS,intron-Distal3.8729924.31434K562DDX3X
chr206071592160715972-5'-UTR,CDS,intron-Distal3.245426.40070HepG2G3BP1
chr206071587460715890-5'-UTR,CDS,intron-Distal3.039796.63166HepG2DDX3X
chr206071840460718468-5'-UTR,intron-Distal4.8621760.84588HepG2DDX3X
chr206071593360715940-5'-UTR,CDS,intron-Distal4.0683419.35024HepG2GRWD1
chr206071587360715916-5'-UTR,CDS,intron-Distal,intron-Proximal4.196976.67126HepG2UCHL5
chr206071589360715918-5'-UTR,CDS,intron-Distal3.297603.29499HepG2PRPF4
chr206071598160715995-5'-UTR,CDS,intron-Distal3.503886.90893HepG2GRWD1
chr206071833460718397-5'-UTR,CDS,intron-Distal3.1540111.68742HepG2RPS3
chr206071587260715912-5'-UTR,CDS,intron-Distal,intron-Proximal3.202027.15054K562ZNF800
chr206071835860718387-5'-UTR,CDS,intron-Distal4.2759028.17483K562DDX3X
chr206071583260715895-5'-UTR,CDS,intron-Distal,intron-Proximal4.9913135.11188HepG2PRPF8
chr206071840860718449-5'-UTR,intron-Distal4.5850015.40823K562DDX3X
chr206071587360715914-5'-UTR,CDS,intron-Distal,intron-Proximal3.4736220.31202HepG2BCLAF1
chr206071584060715917-5'-UTR,CDS,intron-Distal,intron-Proximal3.3190012.80844HepG2AQR
chr206071826560718366-5'-UTR,CDS,intron-Distal3.626047.78729K562GEMIN5
chr206071484460714962-CDS,intron-Distal,intron-Proximal3.7660823.51661K562ZNF800
chr206071488060714893-CDS,intron-Distal3.239178.66222HepG2GRWD1
chr206071484660714867-CDS,intron-Distal3.176308.63181K562YBX3
chr206071493560714961-CDS,intron-Distal4.727435.20395HepG2UCHL5
chr206071413660714172-CDS,intron-Distal3.0569410.85761HepG2GRWD1
chr206071587360715883-CDS,intron-Distal,intron-Proximal3.280698.19895HepG2ZNF800
chr206071487160714891-CDS,intron-Distal3.542419.51734K562YBX3
chr206071826560718335-CDS,intron-Distal3.9620818.02614HepG2GRWD1
chr206071480060714823-CDS,intron-Distal,intron-Proximal3.567315.40420HepG2AQR
chr206071476660714834-CDS,intron-Distal,intron-Proximal3.108093.02792HepG2RBFOX2
chr206071489360714939-CDS,intron-Distal3.1764115.21378HepG2GRWD1
chr206071322660713262-CDS,intron-Distal,intron-Proximal3.278703.91115K562LIN28B
chr206071825060718266-CDS,intron-Distal3.196574.29223HepG2PRPF8
chr206071834060718358-CDS,intron-Distal4.3413120.24705K562DDX3X
chr206071417260714195-CDS,intron-Distal3.255668.94451HepG2GRWD1
chr206071484460714880-CDS,intron-Distal3.9797614.64294HepG2GRWD1
chr206071489960714935-CDS,intron-Distal4.387723.76642HepG2UCHL5
chr206071489160714908-CDS,intron-Distal3.4723716.08103K562YBX3
chr206071192160711993-CDS,intron-Distal,intron-Proximal3.6919123.82845K562ZNF622
chr206071586260715883-CDS,intron-Distal,intron-Proximal3.3058217.43595HepG2BUD13
chr206071493960714961-CDS,intron-Distal3.7460615.28027HepG2GRWD1
chr206071414260714205-CDS,intron-Distal3.5729612.85543K562PUM1
chr206071831560718340-CDS,intron-Distal3.8571613.61786K562DDX3X
chr206071192860711982-CDS,intron-Distal,intron-Proximal4.9158516.27503HepG2GRWD1
chr206071423160714259-CDS,intron-Distal,intron-Proximal4.855934.97857HepG2AQR
chr206071587360715875-CDS,intron-Distal,intron-Proximal4.6451619.00713HepG2GRWD1
chr206071494160714961-CDS,intron-Distal3.3045117.53139HepG2BUD13
chr206071495360714961-CDS,intron-Distal3.165309.00189HepG2BCLAF1
chr206071479260714841-CDS,intron-Distal,intron-Proximal4.9558429.22958HepG2PRPF8
chr206071478860714822-CDS,intron-Distal,intron-Proximal5.4524722.30360K562AQR
chr206071826060718297-CDS,intron-Distal4.1836729.72308HepG2DDX3X
chr206071493260714973-CDS,intron-Distal,intron-Proximal3.101056.66908HepG2PRPF8
chr206071490860714939-CDS,intron-Distal3.3601716.92871K562YBX3
chr206071416260714192-CDS,intron-Distal3.858525.61495HepG2ZNF800
chr206071493960714961-CDS,intron-Distal3.2339111.33832K562YBX3
chr206071421460714273-CDS,intron-Distal,intron-Proximal3.986329.84476K562AQR
chr206071192260712003-CDS,intron-Distal,intron-Proximal3.5158415.85459K562GRWD1
chr206071826260718315-CDS,intron-Distal4.4700241.36851K562DDX3X
chr206071421560714251-CDS,intron-Distal4.503674.88516K562METAP2
chr206071482260714838-CDS,intron-Distal,intron-Proximal5.7994720.69618K562AQR
chr206071483760714844-CDS,intron-Distal4.599389.72888HepG2GRWD1
chr206071414860714182-CDS,intron-Distal3.682734.14411K562METAP2
chr206071482360714836-CDS,intron-Distal,intron-Proximal4.140616.58230HepG2AQR
chr206071425260714295-CDS,intron-Distal,intron-Proximal3.980333.31322HepG2SF3B4
chr206071822560718250-intron-Distal4.641266.23016HepG2PRPF8
chr206071234460712382-intron-Distal,intron-Proximal3.041444.89521HepG2U2AF2
chr206071233360712383-intron-Distal,intron-Proximal3.865253.21003K562U2AF2
chr206071583260715862-intron-Distal,intron-Proximal6.2611715.72370K562AQR
chr206071814860718220-intron-Distal4.653159.23607HepG2EFTUD2
chr206071627960716316-intron-Distal3.305433.45912HepG2HNRNPC
chr206071497060715036-intron-Distal,intron-Proximal5.6075211.93944HepG2AQR
chr206071631660716334-intron-Distal4.121493.64484HepG2HNRNPC
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for PSMA7 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for PSMA7 is not available on ENCORE database.

  • 94 RBPs can affect the levels of PSMA7.  








The Knockdown/knockout RNA-Seq assay for PSMA7 is not available on ENCORE database.





94 RBPs can affect the gene expression of PSMA7 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
PSMA7ENSG00000101182.101445.620902001.45790-0.469405.139303.71820HepG2AATF
PSMA7ENSG00000101182.106644.892504836.086900.458303.947003.32900HepG2AKAP1
PSMA7ENSG00000101182.104065.145804898.03680-0.268904.388703.55880HepG2AUH
PSMA7ENSG00000101182.101892.353801437.306100.396703.685003.00550HepG2BOP1
PSMA7ENSG00000101182.101360.768801664.64230-0.290802.689801.47720HepG2BUD13
PSMA7ENSG00000101182.101877.094801550.805300.275402.886001.84630HepG2YBX3
PSMA7ENSG00000101182.104951.161203857.854200.359906.662705.74810HepG2CELF1
PSMA7ENSG00000101182.101832.648901522.832100.267102.823502.11570HepG2DNAJC21
PSMA7ENSG00000101182.101928.891001485.908300.376302.884601.94510HepG2EEF2
PSMA7ENSG00000101182.102501.047003825.53040-0.613107.258506.33190HepG2EIF2S1
PSMA7ENSG00000101182.103547.778604092.39030-0.206002.539301.73050HepG2EIF4G1
PSMA7ENSG00000101182.102863.897603920.24200-0.453005.128704.03990HepG2EIF4G2
PSMA7ENSG00000101182.102963.448705623.61130-0.9242044.3963042.53690HepG2ETF1
PSMA7ENSG00000101182.103768.171002872.979000.391204.799403.70500HepG2EWSR1
PSMA7ENSG00000101182.101580.182602134.18200-0.433604.848603.82340HepG2FUBP3
PSMA7ENSG00000101182.102081.671902486.28160-0.256203.217602.44890HepG2HNRNPF
PSMA7ENSG00000101182.101018.974301427.36420-0.486204.311703.54120HepG2HNRNPLL
PSMA7ENSG00000101182.101907.908001547.935200.301502.452901.55630HepG2HNRNPM
PSMA7ENSG00000101182.101940.435901698.764200.191802.054501.52280HepG2HNRNPU
PSMA7ENSG00000101182.103370.651602578.450700.386402.532901.74030HepG2LARP4
PSMA7ENSG00000101182.102964.531802067.805400.519606.057204.40040HepG2LARP7
PSMA7ENSG00000101182.105913.830404291.027000.462704.156203.39770HepG2MATR3
PSMA7ENSG00000101182.10861.077101455.88360-0.757705.654104.24490HepG2MTPAP
PSMA7ENSG00000101182.101135.033401524.71120-0.425804.602803.03760HepG2NAA15
PSMA7ENSG00000101182.102808.641103911.28120-0.477804.582203.66450HepG2PABPC4
PSMA7ENSG00000101182.102945.577603814.84450-0.373104.774104.01190HepG2PCBP1
PSMA7ENSG00000101182.101121.421801345.35070-0.262702.331501.61460HepG2PRPF4
PSMA7ENSG00000101182.102978.007503881.56030-0.382306.271605.51300HepG2PTBP1
PSMA7ENSG00000101182.105065.888903926.468700.367501.892301.38590HepG2PUF60
PSMA7ENSG00000101182.105113.027404168.132300.294707.624406.74150HepG2PUM1
PSMA7ENSG00000101182.102496.682602994.96270-0.262503.930403.22080HepG2PUS1
PSMA7ENSG00000101182.102798.728104204.22330-0.5871011.5090010.36360HepG2QKI
PSMA7ENSG00000101182.106187.887604700.296400.396608.075807.29880HepG2RBM22
PSMA7ENSG00000101182.102654.231703815.45260-0.523608.478707.34750HepG2RBM25
PSMA7ENSG00000101182.103428.906202493.522100.459503.055902.01190HepG2RBM27
PSMA7ENSG00000101182.102826.922904023.17350-0.5091010.370209.29150HepG2RECQL
PSMA7ENSG00000101182.101751.607901512.841000.211302.383701.77900HepG2SAFB2
PSMA7ENSG00000101182.101150.401401412.76690-0.296402.044401.43270HepG2SF3B1
PSMA7ENSG00000101182.103505.887704041.53990-0.205102.132501.60330HepG2SF3B4
PSMA7ENSG00000101182.102180.017001764.255900.305205.538204.67930HepG2SMN1
PSMA7ENSG00000101182.104542.818003876.830800.228602.573701.96520HepG2SRSF5
PSMA7ENSG00000101182.102061.052302442.67990-0.245103.013102.29180HepG2SRSF7
PSMA7ENSG00000101182.102598.829103431.73970-0.401105.230304.51400HepG2SRSF9
PSMA7ENSG00000101182.105035.810804409.011900.191702.811302.18610HepG2SUCLG1
PSMA7ENSG00000101182.102336.103903791.24400-0.6986010.543509.56260HepG2TAF15
PSMA7ENSG00000101182.10985.560901391.42940-0.497604.796303.87700HepG2TARDBP
PSMA7ENSG00000101182.102252.550803484.03880-0.629208.672307.20030HepG2TIA1
PSMA7ENSG00000101182.101960.533701665.415900.235302.757702.19420HepG2TRIM56
PSMA7ENSG00000101182.102371.305101919.291300.305002.118701.56090HepG2U2AF1
PSMA7ENSG00000101182.103232.288004060.37360-0.329102.214501.47060HepG2UBE2L3
PSMA7ENSG00000101182.102369.214101831.733900.371102.670101.92400HepG2UCHL5
PSMA7ENSG00000101182.102286.362701967.839200.216302.710102.01720HepG2UPF1
PSMA7ENSG00000101182.10915.682001799.33010-0.974504.821503.14120HepG2XRCC5
PSMA7ENSG00000101182.101075.779201327.66080-0.303503.785003.02040HepG2ZC3H8
PSMA7ENSG00000101182.104179.773502164.248200.9495058.7573057.09260HepG2ZNF622
PSMA7ENSG00000101182.102664.711801850.463200.5260011.1875010.14090K562AGGF1
PSMA7ENSG00000101182.102730.368002033.486700.425002.342001.44980K562AKAP8
PSMA7ENSG00000101182.103026.654701925.517200.6524010.712709.31590K562AKAP8L
PSMA7ENSG00000101182.103419.196504761.64340-0.477802.740402.15460K562AQR
PSMA7ENSG00000101182.102532.946402020.381000.326104.507203.31160K562ATP5C1
PSMA7ENSG00000101182.10788.64150979.09700-0.312102.247501.53350K562CPSF6
PSMA7ENSG00000101182.102501.579502140.496500.224802.783502.13000K562DDX47
PSMA7ENSG00000101182.102393.638902071.828800.208202.303201.51490K562DKC1
PSMA7ENSG00000101182.101956.560501380.872900.502608.183906.82050K562EIF3G
PSMA7ENSG00000101182.102004.809201409.219800.508505.826904.56480K562FIP1L1
PSMA7ENSG00000101182.10935.850801329.25090-0.506303.820502.46620K562FKBP4
PSMA7ENSG00000101182.10740.77420996.25520-0.427503.211502.28500K562FMR1
PSMA7ENSG00000101182.103085.738902162.781400.512604.336703.60340K562FXR1
PSMA7ENSG00000101182.10644.481801166.72360-0.856308.114806.77680K562G3BP2
PSMA7ENSG00000101182.101518.971501816.57900-0.258102.471101.39810K562GLRX3
PSMA7ENSG00000101182.10731.73350934.77710-0.353302.466801.71460K562GPKOW
PSMA7ENSG00000101182.105274.505004502.728100.228101.959101.31720K562GRSF1
PSMA7ENSG00000101182.102669.457003231.88790-0.275802.680501.62530K562HNRNPA1
PSMA7ENSG00000101182.10909.202001529.79390-0.7507011.9242010.75780K562HNRNPC
PSMA7ENSG00000101182.101089.412701366.42460-0.326902.711401.58270K562HNRNPF
PSMA7ENSG00000101182.102033.770801159.187600.8109010.407808.34230K562HNRNPM
PSMA7ENSG00000101182.103061.844403579.16260-0.225202.357901.53250K562HNRNPU
PSMA7ENSG00000101182.102310.286601910.484900.274002.069601.37780K562HSPD1
PSMA7ENSG00000101182.102734.528802043.362500.420205.106003.91720K562KIF1C
PSMA7ENSG00000101182.10525.64310798.23430-0.602703.656502.56550K562KRR1
PSMA7ENSG00000101182.102846.197702230.114700.351803.702802.72120K562MAGOH
PSMA7ENSG00000101182.102448.190401956.075800.323703.189302.01110K562MAK16
PSMA7ENSG00000101182.102861.798802225.447500.362704.065202.93040K562MATR3
PSMA7ENSG00000101182.101621.614401909.91920-0.236102.706001.90610K562MTPAP
PSMA7ENSG00000101182.102053.222601604.498000.355702.156801.40030K562NAA15
PSMA7ENSG00000101182.101766.081702121.96100-0.264804.418703.50060K562NSUN2
PSMA7ENSG00000101182.101433.512001892.44250-0.400703.081202.20280K562PCBP3
PSMA7ENSG00000101182.102391.656601599.864600.580007.313205.85040K562PPIG
PSMA7ENSG00000101182.102516.933501884.258100.417603.795402.91790K562PRPF8
PSMA7ENSG00000101182.101089.019401371.70860-0.332902.738301.83950K562PSIP1
PSMA7ENSG00000101182.103159.755102166.766400.544208.806307.66410K562PTBP1
PSMA7ENSG00000101182.104061.814304797.78940-0.240203.402702.33560K562PUM2
PSMA7ENSG00000101182.102940.222401909.396000.622708.666507.75420K562PUS1
PSMA7ENSG00000101182.102663.745501860.575200.517608.998507.95370K562RBM15
PSMA7ENSG00000101182.10922.697501251.93090-0.440204.669503.37840K562RCC2
PSMA7ENSG00000101182.101034.063201337.16770-0.370902.884401.40600K562SDAD1
PSMA7ENSG00000101182.101674.719702094.02850-0.322404.132903.14810K562SF3A3
PSMA7ENSG00000101182.10641.06050889.07740-0.471803.083602.05480K562SF3B1
PSMA7ENSG00000101182.101500.403901212.702800.307002.779301.92210K562SF3B4
PSMA7ENSG00000101182.101283.034501652.33330-0.364903.206201.57100K562SRSF9
PSMA7ENSG00000101182.10497.374201145.23630-1.203205.650603.23700K562TAF15
PSMA7ENSG00000101182.10845.164401215.69120-0.524505.226202.99930K562TBRG4
PSMA7ENSG00000101182.102542.832002073.650800.294202.862202.02750K562TIA1
PSMA7ENSG00000101182.10862.552001319.30270-0.613106.078104.63460K562TIAL1
PSMA7ENSG00000101182.101135.173801402.06230-0.304602.382701.51520K562TRIM56
PSMA7ENSG00000101182.10900.976701167.62450-0.374003.680902.75020K562U2AF2
PSMA7ENSG00000101182.104077.228605191.42840-0.348504.843902.99520K562UBE2L3
PSMA7ENSG00000101182.101526.074501930.55500-0.339202.760401.74330K562UCHL5
PSMA7ENSG00000101182.101658.322602249.97060-0.440207.473306.36360K562UPF1
PSMA7ENSG00000101182.101471.899901925.21190-0.387303.351102.39220K562WDR3
PSMA7ENSG00000101182.101530.700601966.29020-0.361303.015601.73220K562XRN2
PSMA7ENSG00000101182.104242.510505364.79500-0.338602.309401.53240K562ZC3H8
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for PSMA7 is not available on ENCORE database.





1 RBPs can affect the splicing of PSMA7 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
A3SSPSMA7ENSG00000101182.10chr20-6071413060714295607141306071425360714751607149870.320000.016980.08304longerK562AQR

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for PSMA7 is not avaliable on ENCORE database.