PIP4K2B

General Information

Gene Name       : PIP4K2B
Gene ID             : ENSG00000276293.4
Essential Gene : No

Functions

Localization

Domains (AlphaFold: PIP4K2B)


Antibody Validation


Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878PIP4K2BENSG00000276293.415.6718.0716.87ENCSR000AEF
HepG2PIP4K2BENSG00000276293.453.5840.7047.14ENCSR985KAT
K562PIP4K2BENSG00000276293.418.3919.9219.16ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for PIP4K2B is not avaliable on ENCORE database.



Proteins bound to RNA

  • PIP4K2B RNA is bound by 32 proteins.  







eCLIP assay for PIP4K2B is not avaliable on ENCORE database.





32 proteins are bound to PIP4K2B RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr173692304436923082-3'-UTR,intron-Distal3.463275.65632K562UPF1
chr173692573936925833-3'-UTR,intron-Distal4.032854.22131HepG2DROSHA
chr173692298036923066-3'-UTR,intron-Distal4.365734.93188HepG2UPF1
chr173692336736923573-3'-UTR,intron-Distal3.8780124.24472K562UPF1
chr173692573636925868-3'-UTR,intron-Distal5.4851212.13480HepG2UPF1
chr173692317536923220-3'-UTR,intron-Distal5.068166.92189HepG2PCBP2
chr173692575136925860-3'-UTR,intron-Distal3.969153.61890HepG2G3BP1
chr173692357336923648-3'-UTR,intron-Distal4.3088710.72130K562UPF1
chr173692578236925869-3'-UTR,intron-Distal3.965725.09803HepG2EIF3H
chr173692370736923789-3'-UTR,intron-Distal4.1109913.25367K562UPF1
chr173692579036925825-3'-UTR,intron-Distal3.500134.50192K562FAM120A
chr173692335236923429-3'-UTR,intron-Distal3.8299610.76856K562FAM120A
chr173692578036925870-3'-UTR,intron-Distal4.396639.28502HepG2PRPF4
chr173692315136923204-3'-UTR,intron-Distal3.636677.19915K562UPF1
chr173692370136923799-3'-UTR,intron-Distal4.009725.58116K562SND1
chr173692314636923209-3'-UTR,intron-Distal3.981783.45012HepG2UPF1
chr173692415436924222-3'-UTR,intron-Distal3.699473.15756HepG2EIF3H
chr173692579436925865-3'-UTR,intron-Distal4.922396.02674K562UPF1
chr173692575236925854-3'-UTR,intron-Distal3.139075.40132HepG2BCLAF1
chr173692436836924428-3'-UTR,intron-Distal5.143997.24744K562PUM2
chr173692338736923448-3'-UTR,intron-Distal4.160824.44583HepG2UPF1
chr173692580536925865-3'-UTR,intron-Distal3.458394.45054HepG2PCBP2
chr173695578336955852-5'-UTR,intron-Distal,intron-Proximal5.7426856.23471HepG2FAM120A
chr173695567736955717-5'-UTR,intron-Distal3.451314.45183HepG2CSTF2T
chr173695578336955851-5'-UTR,intron-Distal,intron-Proximal3.0854816.84600HepG2PRPF8
chr173695564936955762-5'-UTR,CDS,intron-Distal5.616696.69401K562DDX3X
chr173695569236955783-5'-UTR,intron-Distal,intron-Proximal6.2510931.89612HepG2FAM120A
chr173695579536955852-5'-UTR,intron-Distal,intron-Proximal5.190165.14122HepG2PCBP2
chr173695579036955849-5'-UTR,intron-Distal,intron-Proximal3.7154110.88459HepG2RBFOX2
chr173695591036955957-5'-UTR,intron-Distal3.788084.51074HepG2RBFOX2
chr173695573436955774-5'-UTR,intron-Distal3.911333.37130HepG2DGCR8
chr173695578336955849-5'-UTR,intron-Distal,intron-Proximal3.428654.96298K562GTF2F1
chr173695578436955837-5'-UTR,intron-Distal,intron-Proximal3.943083.05559HepG2DGCR8
chr173695578736955838-5'-UTR,intron-Distal,intron-Proximal4.592265.21824HepG2XRN2
chr173695595836956013-5'-UTR,intron-Distal3.147478.58484HepG2FAM120A
chr173695608836956161-5'-UTR,intron-Distal,intron-Proximal3.403778.37391HepG2RBFOX2
chr173695572336955774-5'-UTR,intron-Distal3.444667.82214HepG2GTF2F1
chr173695595736956030-5'-UTR,intron-Distal3.206456.99379HepG2RBFOX2
chr173695572336955834-5'-UTR,intron-Distal,intron-Proximal3.5906923.22701HepG2DDX3X
chr173695581436955846-5'-UTR,intron-Distal,intron-Proximal3.726674.16248K562GEMIN5
chr173695572036955783-5'-UTR,intron-Distal,intron-Proximal4.018456.07385K562GTF2F1
chr173695571736955785-5'-UTR,intron-Distal,intron-Proximal3.9230812.48871HepG2CSTF2T
chr173695591536955990-5'-UTR,intron-Distal5.3309610.48744HepG2GTF2F1
chr173695573536955824-5'-UTR,intron-Distal,intron-Proximal3.333444.79853HepG2FKBP4
chr173695607036956169-5'-UTR,intron-Distal,intron-Proximal3.742479.04667HepG2GTF2F1
chr173695579836955844-5'-UTR,intron-Distal,intron-Proximal4.609804.46951K562FAM120A
chr173695566936955725-5'-UTR,CDS,intron-Distal5.012858.64103HepG2GRWD1
chr173695573336955789-5'-UTR,intron-Distal,intron-Proximal4.4954415.86168HepG2PRPF4
chr173695607036956164-5'-UTR,intron-Distal,intron-Proximal3.8131420.50643HepG2CSTF2T
chr173695606436956161-5'-UTR,intron-Distal,intron-Proximal4.5414118.05022HepG2PRPF4
chr173695596136956045-5'-UTR,intron-Distal4.561873.25012HepG2FKBP4
chr173695578136955849-5'-UTR,intron-Distal,intron-Proximal4.203126.87113HepG2DROSHA
chr173695578936955853-5'-UTR,intron-Distal,intron-Proximal5.1218420.06228HepG2PRPF4
chr173695563636955682-5'-UTR,CDS,intron-Distal4.545384.79919K562GEMIN5
chr173695570236955788-5'-UTR,intron-Distal,intron-Proximal5.2487117.16809HepG2RBFOX2
chr173695578536955847-5'-UTR,intron-Distal,intron-Proximal3.379357.64256HepG2CSTF2T
chr173695577436955847-5'-UTR,intron-Distal,intron-Proximal4.9091213.73118HepG2GTF2F1
chr173695570636955843-5'-UTR,intron-Distal,intron-Proximal4.582395.32699K562SLTM
chr173695570936955783-5'-UTR,intron-Distal,intron-Proximal3.0987414.74841HepG2PRPF8
chr173695606736956143-5'-UTR,intron-Distal3.1613910.83920HepG2FAM120A
chr173695572636955788-5'-UTR,intron-Distal,intron-Proximal4.185573.96304K562CSTF2T
chr173695578836955840-5'-UTR,intron-Distal,intron-Proximal3.272933.74485K562DROSHA
chr173695591536956058-5'-UTR,intron-Distal3.7597614.07444HepG2PRPF4
chr173695608036956156-5'-UTR,intron-Distal3.729239.88902HepG2DDX3X
chr173695595036956000-5'-UTR,intron-Distal3.287044.20593HepG2PCBP2
chr173695594636956025-5'-UTR,intron-Distal3.088778.48430HepG2CSTF2T
chr173692722036927272-CDS,intron-Distal,intron-Proximal4.3377710.26986HepG2PRPF8
chr173692675236926809-CDS,intron-Distal,intron-Proximal3.010934.63605HepG2U2AF2
chr173695552336955582-CDS,intron-Distal3.302626.04937HepG2PRPF4
chr173694049836940545-CDS,intron-Distal3.220374.27261HepG2GRWD1
chr173692677036926818-CDS,intron-Distal,intron-Proximal4.198834.91614HepG2GRWD1
chr173693670436936767-CDS,intron-Distal,intron-Proximal3.562483.32039HepG2PPIG
chr173692725836927307-CDS,intron-Distal,intron-Proximal3.152283.80299HepG2GRWD1
chr173693677636936854-CDS,intron-Distal,intron-Proximal3.345843.36945K562ZNF622
chr173693671736936770-CDS,intron-Distal,intron-Proximal3.754045.58683HepG2GRWD1
chr173693558936935662-CDS,intron-Distal,intron-Proximal4.102449.39957HepG2PRPF8
chr173695558836955669-CDS,intron-Distal5.2513510.01485HepG2GRWD1
chr173694045436940500-CDS,intron-Distal,intron-Proximal4.683716.01989HepG2PRPF8
chr173693454536934644-CDS,intron-Distal,intron-Proximal3.547766.57821HepG2AQR
chr173693393936933986-CDS,intron-Distal,intron-Proximal3.477525.14253HepG2GRWD1
chr173695553236955643-CDS,intron-Distal3.867454.95416K562ZNF800
chr173693393936933983-CDS,intron-Distal,intron-Proximal4.395614.43680K562ZNF622
chr173693679336936861-CDS,intron-Distal,intron-Proximal3.020663.52281HepG2GRWD1
chr173693395936934039-CDS,intron-Distal3.872824.93978HepG2BCLAF1
chr173693453736934609-CDS,intron-Distal,intron-Proximal4.394446.81564HepG2PRPF8
chr173692678036926874-CDS,intron-Distal,intron-Proximal4.654204.62947HepG2AQR
chr173695352836953610-intron-Distal4.9748620.82905HepG2HNRNPM
chr173695346436953508-intron-Distal4.523399.41947HepG2HNRNPM
chr173695527936955483-intron-Distal3.985536.58297HepG2HNRNPK
chr173695468036954777-intron-Distal5.0233913.66955HepG2HNRNPM
chr173695370736953765-intron-Distal5.1161514.18427HepG2HNRNPM
chr173695285736952879-intron-Distal4.687424.31871HepG2HNRNPM
chr173695465336954680-intron-Distal3.765935.62053HepG2HNRNPM
chr173695531636955370-intron-Distal3.472703.76326HepG2RBFOX2
chr173695265836952847-intron-Distal4.9259310.13530HepG2EXOSC5
chr173693156336931653-intron-Distal3.963133.24590HepG2ILF3
chr173694317536943220-intron-Distal,intron-Proximal4.5655711.57554HepG2SF3A3
chr173695378436953826-intron-Distal4.751136.08412HepG2HNRNPM
chr173693257636932623-intron-Distal3.249323.06005HepG2QKI
chr173695421436954238-intron-Distal3.564403.90822HepG2HNRNPM
chr173693503236935127-intron-Distal4.966206.17200HepG2PCBP2
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for PIP4K2B is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for PIP4K2B is not available on ENCORE database.

  • 85 RBPs can affect the levels of PIP4K2B.  








The Knockdown/knockout RNA-Seq assay for PIP4K2B is not available on ENCORE database.





85 RBPs can affect the gene expression of PIP4K2B :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
PIP4K2BENSG00000141720.71677.040502071.90270-0.305002.233101.33760HepG2ADAR
PIP4K2BENSG00000141720.72320.936303563.54320-0.618606.218705.45800HepG2AKAP1
PIP4K2BENSG00000141720.72204.282802738.96290-0.313304.830703.84210HepG2AKAP8L
PIP4K2BENSG00000141720.74194.880103675.599200.190602.357501.71450HepG2AUH
PIP4K2BENSG00000141720.7849.184401654.37700-0.9621016.9536015.65390HepG2BOP1
PIP4K2BENSG00000141720.71481.683801976.96590-0.416105.191304.17520HepG2CALR
PIP4K2BENSG00000141720.73436.278502801.319300.294602.200601.50650HepG2CIRBP
PIP4K2BENSG00000141720.71697.741502725.54840-0.6829024.7414023.20230HepG2CKAP4
PIP4K2BENSG00000141720.7743.546801518.77900-1.0304017.3477015.80200HepG2CPSF6
PIP4K2BENSG00000141720.71842.717401479.741900.316402.483601.46090HepG2CSTF2
PIP4K2BENSG00000141720.72174.152803101.96830-0.5127010.853609.74560HepG2CELF1
PIP4K2BENSG00000141720.71745.720502355.28900-0.432103.137902.32230HepG2DDX55
PIP4K2BENSG00000141720.71970.723502932.30540-0.573305.332604.50130HepG2DDX6
PIP4K2BENSG00000141720.71653.584002086.30100-0.335404.341003.47640HepG2DNAJC21
PIP4K2BENSG00000141720.72266.844402818.97720-0.314502.235901.69700HepG2EIF2S1
PIP4K2BENSG00000141720.71905.188803115.34030-0.709507.861706.78620HepG2EIF4A3
PIP4K2BENSG00000141720.72739.246403290.54380-0.264503.712102.76600HepG2EIF4G1
PIP4K2BENSG00000141720.74928.897604220.112000.223903.281802.63600HepG2ETF1
PIP4K2BENSG00000141720.72002.368702663.93390-0.411904.901303.79330HepG2EWSR1
PIP4K2BENSG00000141720.71706.985902489.70460-0.544505.110304.09370HepG2FIP1L1
PIP4K2BENSG00000141720.72278.087401699.696200.422404.785503.76770HepG2FUBP3
PIP4K2BENSG00000141720.73924.800002915.775700.428603.681602.91800HepG2G3BP1
PIP4K2BENSG00000141720.73923.749703095.388300.342002.861201.95220HepG2G3BP2
PIP4K2BENSG00000141720.72722.988702191.690800.313002.267401.34900HepG2GNB2L1
PIP4K2BENSG00000141720.72064.439502602.71190-0.334305.488304.16230HepG2HDGF
PIP4K2BENSG00000141720.72389.368803065.26960-0.359406.102804.80730HepG2HNRNPA2B1
PIP4K2BENSG00000141720.71090.618302342.86010-1.1031024.6354022.80990HepG2HNRNPC
PIP4K2BENSG00000141720.72034.022603038.16810-0.5789019.6941018.04890HepG2HNRNPL
PIP4K2BENSG00000141720.71692.716702781.35090-0.716402.748401.76940HepG2IGF2BP3
PIP4K2BENSG00000141720.72085.343202492.05790-0.257104.249802.99870HepG2KIF1C
PIP4K2BENSG00000141720.74018.993703236.338100.312402.239301.66660HepG2NCBP2
PIP4K2BENSG00000141720.72343.242103307.27200-0.497108.786507.45340HepG2NOL12
PIP4K2BENSG00000141720.71170.599101456.83620-0.315602.241301.56550HepG2NSUN2
PIP4K2BENSG00000141720.71932.745702303.69360-0.253303.147202.24890HepG2PARN
PIP4K2BENSG00000141720.71785.928602436.13780-0.447902.589201.58260HepG2PCBP2
PIP4K2BENSG00000141720.71023.909401297.90500-0.342103.242201.90780HepG2PKM
PIP4K2BENSG00000141720.71633.632302075.82760-0.345604.491103.57280HepG2PPIL4
PIP4K2BENSG00000141720.72777.786402182.722200.347705.723504.65390HepG2PRPF4
PIP4K2BENSG00000141720.73619.250802976.064800.282204.362103.70910HepG2PTBP1
PIP4K2BENSG00000141720.73030.341003351.43390-0.145301.819701.31650HepG2PUM1
PIP4K2BENSG00000141720.71998.684203348.96840-0.7447017.2674015.68430HepG2PUM2
PIP4K2BENSG00000141720.74099.967302776.821000.5621018.4094017.07350HepG2PUS1
PIP4K2BENSG00000141720.73767.168003223.208300.224902.302401.72320HepG2QKI
PIP4K2BENSG00000141720.71716.030202350.87290-0.454102.145601.51910HepG2RAVER1
PIP4K2BENSG00000141720.71664.070902466.68870-0.567909.917008.43480HepG2RBM15
PIP4K2BENSG00000141720.74421.877503527.226000.326005.090104.44150HepG2RBM22
PIP4K2BENSG00000141720.72686.720003312.09650-0.301904.890204.20640HepG2NELFE
PIP4K2BENSG00000141720.71267.107001527.15360-0.269302.067901.53010HepG2RPS19
PIP4K2BENSG00000141720.71357.174702072.62400-0.6109016.3745015.00050HepG2SAFB2
PIP4K2BENSG00000141720.71148.524801626.13700-0.501705.208504.26130HepG2SF3B1
PIP4K2BENSG00000141720.71529.094202417.02630-0.6606023.5357021.95730HepG2SMN1
PIP4K2BENSG00000141720.71395.416402397.30350-0.780707.471805.84840HepG2SMNDC1
PIP4K2BENSG00000141720.71130.598601809.37910-0.678404.793103.75160HepG2SNRNP70
PIP4K2BENSG00000141720.74463.623403983.860000.163902.162901.70260HepG2SRFBP1
PIP4K2BENSG00000141720.72671.643203234.15960-0.275704.583704.01340HepG2SRSF1
PIP4K2BENSG00000141720.72222.224802631.14440-0.243703.426002.82550HepG2SRSF9
PIP4K2BENSG00000141720.74393.228303458.913000.344907.300306.54370HepG2SSB
PIP4K2BENSG00000141720.71471.993202402.31980-0.706707.950905.94710HepG2SSRP1
PIP4K2BENSG00000141720.71194.662901680.76020-0.492505.798904.46080HepG2SUPT6H
PIP4K2BENSG00000141720.72464.827802906.93470-0.238002.687602.13440HepG2TAF15
PIP4K2BENSG00000141720.73777.393402359.608400.678703.207502.06140HepG2TBRG4
PIP4K2BENSG00000141720.71257.258502281.69190-0.8598028.7243027.14690HepG2TRIM56
PIP4K2BENSG00000141720.72159.298303264.82230-0.596406.206404.92310HepG2UBE2L3
PIP4K2BENSG00000141720.7820.404601385.08960-0.755608.935907.56840HepG2UCHL5
PIP4K2BENSG00000141720.72858.886302463.428600.214702.835702.12920HepG2UPF1
PIP4K2BENSG00000141720.71819.380602378.34570-0.386507.000206.12130HepG2UTP3
PIP4K2BENSG00000141720.71788.902302308.07740-0.367602.767402.04250HepG2XRN2
PIP4K2BENSG00000141720.72537.219902154.084600.236103.534302.78950HepG2ZC3H8
PIP4K2BENSG00000141720.71359.817302348.82310-0.788507.734805.45350HepG2ZRANB2
PIP4K2BENSG00000141720.71685.558901412.275700.255102.792702.22220K562AGGF1
PIP4K2BENSG00000141720.72820.424202289.905700.300502.886901.62010K562APOBEC3C
PIP4K2BENSG00000141720.7631.50090913.47580-0.532604.340603.24080K562BOP1
PIP4K2BENSG00000141720.71206.093101687.76810-0.484806.311304.50250K562CCDC124
PIP4K2BENSG00000141720.71368.743701118.798400.290802.352101.39500K562DDX3X
PIP4K2BENSG00000141720.73077.957602595.134700.246102.854801.90170K562EIF4G2
PIP4K2BENSG00000141720.71246.58400988.293000.334902.389801.59340K562FMR1
PIP4K2BENSG00000141720.72094.390602524.42580-0.269402.375901.67380K562GRSF1
PIP4K2BENSG00000141720.7786.245101099.28320-0.483504.704003.94580K562HNRNPC
PIP4K2BENSG00000141720.71978.298702766.16270-0.483605.574503.97270K562MSI2
PIP4K2BENSG00000141720.7984.571701275.31960-0.373303.051602.02430K562PCBP2
PIP4K2BENSG00000141720.71342.820401721.98490-0.358802.565901.76570K562PCBP3
PIP4K2BENSG00000141720.71074.337301320.81500-0.298002.454901.70280K562POLR2G
PIP4K2BENSG00000141720.71050.721001296.68940-0.303501.945501.30960K562PRPF8
PIP4K2BENSG00000141720.7685.66390899.15830-0.391103.102002.04450K562RCC2
PIP4K2BENSG00000141720.7872.507801067.60540-0.291102.304801.52640K562SF3B4
PIP4K2BENSG00000141720.7880.180401328.55600-0.594003.701901.65990K562SMN1
PIP4K2BENSG00000141720.71277.342501584.35560-0.310804.352803.20630K562SRPK2
PIP4K2BENSG00000141720.7765.048501027.83820-0.426004.193803.20800K562U2AF2
PIP4K2BENSG00000141720.71051.364201328.78090-0.337802.306601.38550K562UCHL5
PIP4K2BENSG00000141720.71953.337901661.698500.233202.669601.96370K562UPF1
PIP4K2BENSG00000141720.71129.718101421.85940-0.331802.877501.98400K562WDR3
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for PIP4K2B is not available on ENCORE database.





7 RBPs can affect the splicing of PIP4K2B :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEPIP4K2BENSG00000141720.7chr17-369404953694059236936704369368573694307536943173-0.159000.000040.00139excludedHepG2U2AF1
SEPIP4K2BENSG00000141720.7chr17-3694226936942377369404953694059236943075369431730.086000.000010.00039includedHepG2HNRNPK
SEPIP4K2BENSG00000141720.7chr17-3693588736935973369356353693578236936704369368570.106000.000110.00190includedK562AQR
SEPIP4K2BENSG00000141720.7chr17-369361043693618536935635369357823693670436936857-0.113000.000020.00392excludedHepG2DDX3X
SEPIP4K2BENSG00000141720.7chr17-369361043693618536935635369357823693670436936857-0.270000.000970.04467excludedHepG2SFPQ
SEPIP4K2BENSG00000141720.7chr17-369404953694059236936704369368573694307536943173-0.087000.004720.08483excludedHepG2SRSF1
SEPIP4K2BENSG00000141720.7chr17-3693610436936185369356353693578236936704369368570.161000.000190.01008includedK562HNRNPU
A3SSPIP4K2BENSG00000141720.7chr17-3693458636934658369345863693462536935635369357820.061000.000310.00245longerK562AQR
A3SSPIP4K2BENSG00000141720.7chr17-3692668836926862369266883692679236927266369275250.108000.001420.00949longerK562AQR
A3SSPIP4K2BENSG00000141720.7chr17-3693670436936939369367043693685736940495369405920.057000.000690.00502longerK562AQR
MXEPIP4K2BENSG00000141720.7chr17-36940495369405923694307536943173369367043693685736955518369561580.141000.005360.076111includedHepG2U2AF1

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for PIP4K2B is not avaliable on ENCORE database.