PERP

General Information

Gene Name       : PERP
Gene ID             : ENSG00000112378.11
Essential Gene : No

Functions

Localization

Domains (AlphaFold: PERP)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878PERPENSG00000112378.110.560.530.55ENCSR000AEF
HepG2PERPENSG00000112378.1120.1131.1325.62ENCSR985KAT
K562PERPENSG00000112378.110.020.050.04ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for PERP is not avaliable on ENCORE database.



Proteins bound to RNA
  • PERP RNA is bound by 10 proteins.  







eCLIP assay for PERP is not avaliable on ENCORE database.





10 proteins are bound to PERP RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr6138412977138413027-3'-UTR,intron-Distal5.0035810.60563HepG2FUBP3
chr6138412441138412482-3'-UTR,intron-Distal4.4405216.71743HepG2TIAL1
chr6138412856138412977-3'-UTR,intron-Distal4.8800413.58942HepG2FUBP3
chr6138412427138412485-3'-UTR,intron-Distal3.2459110.00120HepG2FUBP3
chr6138412083138412129-3'-UTR,intron-Distal4.403645.40422HepG2IGF2BP1
chr6138412004138412048-3'-UTR,intron-Distal4.706666.02704HepG2ZC3H11A
chr6138412399138412482-3'-UTR,intron-Distal6.2439221.56853HepG2TIA1
chr6138412027138412080-3'-UTR,intron-Distal4.331444.01886HepG2LIN28B
chr6138428606138428631-5'-UTR,intron-Distal4.455495.32769HepG2DDX3X
chr6138428535138428587-5'-UTR,intron-Distal6.0823721.38819HepG2DDX3X
chr6138428351138428400-CDS,intron-Distal3.4314214.44873HepG2DDX3X
chr6138413256138413324-CDS,intron-Distal3.8641518.68502HepG2SND1
chr6138428263138428420-CDS,intron-Distal3.9669821.55856HepG2RPS3
chr6138417492138417549-CDS,intron-Distal3.697923.34998HepG2IGF2BP3
chr6138413183138413256-CDS,intron-Distal4.1791515.16413HepG2SND1
chr6138413267138413322-CDS,intron-Distal3.115027.01088HepG2IGF2BP1
chr6138428261138428351-CDS,intron-Distal4.3002616.72391HepG2DDX3X
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for PERP is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for PERP is not available on ENCORE database.

  • 106 RBPs can affect the levels of PERP.  








The Knockdown/knockout RNA-Seq assay for PERP is not available on ENCORE database.





106 RBPs can affect the gene expression of PERP :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
PERPENSG00000112378.113671.744402372.829100.629808.652006.87810HepG2AATF
PERPENSG00000112378.111998.754003081.33730-0.624506.950405.54460HepG2ABCF1
PERPENSG00000112378.114421.264203344.796600.4024010.319209.30020HepG2ACO1
PERPENSG00000112378.114084.108703360.781700.281103.022802.22490HepG2AKAP8L
PERPENSG00000112378.115281.656704608.047200.196702.645901.97320HepG2AUH
PERPENSG00000112378.114289.849802390.828100.8433013.0573011.59280HepG2CALR
PERPENSG00000112378.111624.395004327.56370-1.4137011.536009.57980HepG2CCAR1
PERPENSG00000112378.111617.092802629.21480-0.701204.550102.02950HepG2CDC40
PERPENSG00000112378.116877.204409420.04380-0.453902.641001.89430HepG2CNOT7
PERPENSG00000112378.112126.281801736.918400.291702.059901.45590HepG2CPSF6
PERPENSG00000112378.113174.418902537.347400.323103.184601.99640HepG2CPSF7
PERPENSG00000112378.113486.733302429.528700.521103.943102.21680HepG2CSTF2T
PERPENSG00000112378.118461.394404559.691500.8919038.4365036.59450HepG2CELF1
PERPENSG00000112378.112475.876703093.60710-0.321406.375805.18890HepG2DDX19B
PERPENSG00000112378.111007.394702617.88490-1.3778038.9737036.88370HepG2DDX21
PERPENSG00000112378.111931.767302561.85590-0.407305.018103.78040HepG2DDX24
PERPENSG00000112378.114638.409302415.880400.9410014.9960013.38480HepG2DDX55
PERPENSG00000112378.113659.076101972.378100.891406.928305.42380HepG2DDX59
PERPENSG00000112378.118198.161806136.699800.417703.364102.69030HepG2DDX6
PERPENSG00000112378.112131.724803200.14800-0.5861010.468209.32280HepG2DKC1
PERPENSG00000112378.113826.427602926.663000.386606.652705.59870HepG2DNAJC21
PERPENSG00000112378.111952.807602617.79690-0.422803.817002.74810HepG2EEF2
PERPENSG00000112378.113910.459802410.734100.697807.089905.35160HepG2AGO1
PERPENSG00000112378.114480.601805898.68940-0.396703.615802.94250HepG2EIF2S1
PERPENSG00000112378.111798.185202472.20560-0.459306.230704.70590HepG2EIF3G
PERPENSG00000112378.111952.995906518.42150-1.7388044.4002041.92070HepG2EIF4A3
PERPENSG00000112378.114701.022006347.21590-0.433102.928002.22120HepG2EIF4B
PERPENSG00000112378.112142.480902669.08840-0.317102.710801.63000HepG2ESF1
PERPENSG00000112378.114388.275905290.50410-0.269804.523303.78930HepG2ETF1
PERPENSG00000112378.112465.209601899.249300.376204.716503.15380HepG2FAM120A
PERPENSG00000112378.113418.328502494.779600.454305.932904.36480HepG2FASTKD2
PERPENSG00000112378.115388.039303111.368300.7921010.634509.26460HepG2FIP1L1
PERPENSG00000112378.113465.961706577.79340-0.9243016.9157015.36420HepG2FXR1
PERPENSG00000112378.114777.626006101.35280-0.352802.729902.06820HepG2G3BP1
PERPENSG00000112378.113649.592106478.04120-0.8278014.4234012.41430HepG2G3BP2
PERPENSG00000112378.111205.487001892.13500-0.650408.159606.66560HepG2GEMIN5
PERPENSG00000112378.111220.808201969.10080-0.689704.391903.59740HepG2GPKOW
PERPENSG00000112378.116384.764508720.26150-0.449702.871501.73790HepG2GRSF1
PERPENSG00000112378.114610.455903272.935700.494203.078301.41300HepG2GTF2F1
PERPENSG00000112378.113707.439803193.520400.215202.445801.52090HepG2HDGF
PERPENSG00000112378.116391.703203328.102600.941408.076805.63800HepG2HLTF
PERPENSG00000112378.111021.707502954.69930-1.5320049.3361047.31100HepG2HNRNPA1
PERPENSG00000112378.117815.606904505.950100.7944033.6808031.18650HepG2HNRNPA2B1
PERPENSG00000112378.115153.677507778.71790-0.593905.527403.49080HepG2HNRNPAB
PERPENSG00000112378.112071.297903286.49750-0.6660010.623309.34080HepG2HNRNPC
PERPENSG00000112378.115157.506106179.37520-0.260802.141101.52170HepG2HNRNPK
PERPENSG00000112378.115035.188604466.475200.172802.724002.05540HepG2HNRNPL
PERPENSG00000112378.112327.004101879.134000.308302.031001.48280HepG2HNRNPLL
PERPENSG00000112378.112562.786703264.77360-0.349302.161401.61830HepG2HNRNPU
PERPENSG00000112378.112173.215502707.49400-0.317102.265301.60740HepG2IGF2BP1
PERPENSG00000112378.113569.909506201.70850-0.7968012.8040011.47310HepG2IGF2BP2
PERPENSG00000112378.116240.990408976.19990-0.524304.550402.96820HepG2KHDRBS1
PERPENSG00000112378.113451.481203057.765700.174602.527001.54980HepG2KIF1C
PERPENSG00000112378.113639.135604855.53510-0.416002.600201.39790HepG2KRR1
PERPENSG00000112378.112535.819806580.09420-1.3757033.8152031.73440HepG2MAGOH
PERPENSG00000112378.113408.177306616.76290-0.9571015.5194014.11700HepG2MATR3
PERPENSG00000112378.113189.876602224.129300.520203.490502.31270HepG2METAP2
PERPENSG00000112378.114638.256206772.49530-0.546105.999005.08260HepG2NCBP2
PERPENSG00000112378.113261.630504604.94050-0.497603.395901.80350HepG2NKRF
PERPENSG00000112378.111134.407804861.91160-2.09960133.83850129.92680HepG2NOL12
PERPENSG00000112378.111135.905201666.08930-0.552603.392702.56400HepG2NSUN2
PERPENSG00000112378.113164.952405696.83480-0.8480038.2604036.46450HepG2PCBP1
PERPENSG00000112378.113117.642104719.31530-0.598105.760703.14530HepG2PPIG
PERPENSG00000112378.11925.033801894.05230-1.0339015.7743014.17180HepG2PRPF4
PERPENSG00000112378.112034.395003456.89220-0.764906.504004.70870HepG2PRPF6
PERPENSG00000112378.113045.787501864.156600.7082010.069808.64960HepG2PRPF8
PERPENSG00000112378.114614.395405796.79290-0.329106.249305.49210HepG2PTBP1
PERPENSG00000112378.113683.174604641.02620-0.333503.369602.72080HepG2PUF60
PERPENSG00000112378.114242.997206277.96230-0.5652013.1396011.92450HepG2QKI
PERPENSG00000112378.1114123.310103173.535502.1538037.0777034.81340HepG2RAVER1
PERPENSG00000112378.115441.062603496.443800.6379014.3129012.60290HepG2RBM15
PERPENSG00000112378.119062.600304421.913901.0352049.9426048.27560HepG2RBM22
PERPENSG00000112378.112887.912305697.69490-0.9804027.8923025.91670HepG2RBM25
PERPENSG00000112378.112038.481502972.93480-0.544403.206902.06390HepG2RCC2
PERPENSG00000112378.113075.470806451.23200-1.0688059.0975057.37260HepG2NELFE
PERPENSG00000112378.113452.137306008.52200-0.7995035.3601033.63320HepG2RECQL
PERPENSG00000112378.113457.900702961.329100.223601.903001.32440HepG2RPLP0
PERPENSG00000112378.112326.209203116.90890-0.422102.326801.45980HepG2RPS10
PERPENSG00000112378.112605.684403376.64960-0.373903.073502.23020HepG2RPS2
PERPENSG00000112378.114160.035309459.36920-1.1851018.0710016.12640HepG2RPS3A
PERPENSG00000112378.114557.965201844.085901.3054027.4837025.50800HepG2RRP9
PERPENSG00000112378.112442.190601860.068700.392703.489302.70610HepG2SF3B1
PERPENSG00000112378.114624.499606035.11910-0.384109.047208.07160HepG2SF3B4
PERPENSG00000112378.113606.298602069.617700.801107.172405.90720HepG2SNRNP70
PERPENSG00000112378.1111973.439104994.444601.26130105.83640103.86620HepG2SRFBP1
PERPENSG00000112378.113243.823406299.39470-0.9575054.9261053.41690HepG2SRSF1
PERPENSG00000112378.113199.289502001.163800.676802.537501.58270HepG2SRSF3
PERPENSG00000112378.112315.046004336.45730-0.9055041.9034040.47780HepG2SSB
PERPENSG00000112378.112850.462502078.014700.455903.068801.77250HepG2STAU1
PERPENSG00000112378.115757.134502965.674800.9569010.751108.51770HepG2SUB1
PERPENSG00000112378.114246.220705662.24410-0.415208.278807.39340HepG2TAF15
PERPENSG00000112378.112146.175504754.91930-1.147708.121606.39740HepG2TBRG4
PERPENSG00000112378.112542.283501612.153800.657008.573907.01320HepG2TFIP11
PERPENSG00000112378.116788.988705202.722200.383804.768903.68100HepG2TIA1
PERPENSG00000112378.112351.257503172.55940-0.432205.100804.46490HepG2TIAL1
PERPENSG00000112378.112738.083603200.68160-0.225202.250301.73130HepG2TRIM56
PERPENSG00000112378.113495.036202661.465900.393003.568602.85960HepG2U2AF1
PERPENSG00000112378.111982.223701420.875600.480204.834603.82540HepG2UCHL5
PERPENSG00000112378.111275.796102202.73270-0.787905.380003.95500HepG2UPF2
PERPENSG00000112378.11992.046402298.64210-1.2123052.1603050.07540HepG2UTP3
PERPENSG00000112378.111387.250702367.56930-0.771209.637708.30140HepG2XRN2
PERPENSG00000112378.112238.774901869.082700.260303.171602.46100HepG2ZC3H8
PERPENSG00000112378.114344.203002618.507800.7302037.0941035.68610HepG2ZNF622
PERPENSG00000112378.1158.1844013.802002.075706.153305.35870K562AGGF1
PERPENSG00000112378.1141.3662012.802701.691903.007602.40050K562AQR
PERPENSG00000112378.1130.295908.123801.898802.343701.64530K562GRSF1
PERPENSG00000112378.1121.977804.400802.320102.331501.48260K562KRR1
PERPENSG00000112378.1143.782403.256103.749007.162105.95760K562PRPF8
PERPENSG00000112378.1139.832604.901303.022605.487504.08630K562SF3B1
PERPENSG00000112378.1138.735807.195002.428505.352304.24010K562U2AF2
PERPENSG00000112378.1126.452105.497602.266403.089201.81210K562UTP3
PERPENSG00000112378.1140.3240014.422001.483302.885702.00070K562ZC3H8
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for PERP is not available on ENCORE database.






No RBPs affect the alternative splcing events of PERP on ENCORE database.





The Knockdown/knockout RNA-Seq assay for PERP is not avaliable on ENCORE database.