NREP

General Information

Gene Name       : NREP
Gene ID             : ENSG00000134986.13
Essential Gene : No

Functions

Localization

Domains (AlphaFold: NREP)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878NREPENSG00000134986.1348.1640.6444.40ENCSR000AEF
HepG2NREPENSG00000134986.1339.4869.4054.44ENCSR985KAT
K562NREPENSG00000134986.130.220.100.16ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for NREP is not avaliable on ENCORE database.



Proteins bound to RNA
  • NREP RNA is bound by 9 proteins.  







eCLIP assay for NREP is not avaliable on ENCORE database.





9 proteins are bound to NREP RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr5111091476111091528-3'-UTR,5'-UTR,intron-Distal,intron-Proximal3.438944.88012HepG2PPIG
chr5111066241111066377-3'-UTR,intron-Distal,intron-Proximal3.883545.62569HepG2IGF2BP1
chr5111092909111093008-5'-UTR,intron-Distal,intron-Proximal4.5636710.46790HepG2PCBP2
chr5111092780111092887-5'-UTR,intron-Distal,intron-Proximal3.202927.80135HepG2EFTUD2
chr5111093318111093379-5'-UTR,intron-Distal,intron-Proximal4.134718.97908HepG2DDX3X
chr5111092790111092856-5'-UTR,intron-Distal,intron-Proximal3.295086.92749HepG2PRPF8
chr5111093264111093365-5'-UTR,intron-Distal,intron-Proximal3.648105.38934HepG2NCBP2
chr5111093258111093318-5'-UTR,intron-Distal,intron-Proximal4.1885917.71274HepG2DDX3X
chr5111071114111071197-CDS,intron-Distal,intron-Proximal4.541224.50179HepG2CDC40
chr5111035393111035475-intron-Distal3.821963.04956HepG2HNRNPL
chr5111092722111092780-intron-Distal,intron-Proximal3.392176.39581HepG2EFTUD2
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for NREP is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for NREP is not available on ENCORE database.

  • 116 RBPs can affect the levels of NREP.  








The Knockdown/knockout RNA-Seq assay for NREP is not available on ENCORE database.





116 RBPs can affect the gene expression of NREP :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
NREPENSG00000134986.91222.806702228.34610-0.8658022.2119020.86140HepG2ACO1
NREPENSG00000134986.91120.899104307.04900-1.9420050.8528049.01030HepG2AKAP1
NREPENSG00000134986.91795.475402392.23020-0.414003.149502.04040HepG2AKAP8
NREPENSG00000134986.92840.462902238.549300.343505.723904.65710HepG2AKAP8L
NREPENSG00000134986.91472.89930818.656700.847203.893201.91110HepG2APOBEC3C
NREPENSG00000134986.92969.931602277.511500.382907.334606.30420HepG2AUH
NREPENSG00000134986.91059.145401501.52920-0.503503.120802.12510HepG2BCCIP
NREPENSG00000134986.94532.811703016.028200.5877011.7133010.30360HepG2CALR
NREPENSG00000134986.92784.458704494.52150-0.690803.555001.36910HepG2CDC40
NREPENSG00000134986.95095.600803385.785300.589707.595806.36400HepG2CIRBP
NREPENSG00000134986.91622.966002227.54170-0.456809.249508.17190HepG2CKAP4
NREPENSG00000134986.91586.14300876.755700.855203.344802.49730HepG2CNOT7
NREPENSG00000134986.97342.357102128.139401.7866045.2105042.91340HepG2CPSF6
NREPENSG00000134986.9733.571002384.45510-1.7007048.4331046.42680HepG2CELF1
NREPENSG00000134986.92379.955001946.714400.289802.359001.72590HepG2DDX21
NREPENSG00000134986.92686.574401904.731900.496107.067805.61910HepG2DDX24
NREPENSG00000134986.95088.526004125.842800.302502.226601.65950HepG2DDX3X
NREPENSG00000134986.95157.885203075.234400.7460012.5651010.60340HepG2DDX5
NREPENSG00000134986.91209.537803544.14740-1.5510033.2637031.47030HepG2DDX6
NREPENSG00000134986.92518.354101713.552300.555407.468005.92830HepG2DHX30
NREPENSG00000134986.93389.076202131.840600.6687011.7352010.54190HepG2DKC1
NREPENSG00000134986.91298.646701792.40420-0.464903.165001.97260HepG2AGO1
NREPENSG00000134986.91835.550402471.72060-0.429304.197902.76740HepG2EIF2S2
NREPENSG00000134986.92636.952303665.99120-0.475303.255002.51190HepG2EIF4B
NREPENSG00000134986.93373.897902529.480800.415507.693306.42780HepG2EIF4G1
NREPENSG00000134986.94050.368302423.156300.7411011.6774010.07770HepG2EIF4G2
NREPENSG00000134986.94341.406502822.778000.620908.526406.76570HepG2ESF1
NREPENSG00000134986.93465.797002614.739100.406408.449307.49820HepG2ETF1
NREPENSG00000134986.93359.742802177.208100.6258010.821809.20380HepG2EWSR1
NREPENSG00000134986.9993.643601539.57000-0.631709.911907.69910HepG2FAM120A
NREPENSG00000134986.92982.017101855.003600.6848011.792309.72420HepG2FASTKD2
NREPENSG00000134986.91406.471303291.01150-1.2265013.6433012.13140HepG2FIP1L1
NREPENSG00000134986.91803.838701228.842400.553705.909704.12450HepG2FKBP4
NREPENSG00000134986.95413.874902131.775901.344509.672107.80450HepG2FTO
NREPENSG00000134986.91773.062603798.95250-1.0994021.7404019.99620HepG2FXR1
NREPENSG00000134986.92218.374303524.11370-0.667807.829206.74010HepG2G3BP1
NREPENSG00000134986.92479.335601533.812600.692707.737406.27300HepG2GEMIN5
NREPENSG00000134986.91067.785701756.30380-0.717908.281006.51640HepG2GNB2L1
NREPENSG00000134986.91759.923502127.23840-0.273503.335902.26940HepG2HDGF
NREPENSG00000134986.94024.574401793.690101.165807.848906.84410HepG2HNRNPA1
NREPENSG00000134986.9473.99930723.31700-0.609702.819701.40450HepG2HNRNPAB
NREPENSG00000134986.92615.336101995.083500.390404.007303.18340HepG2HNRNPC
NREPENSG00000134986.92105.510701512.996900.476708.159007.00950HepG2HNRNPF
NREPENSG00000134986.91951.156403568.41860-0.8710016.2545014.71010HepG2HNRNPK
NREPENSG00000134986.96838.211502302.221701.5705049.1251046.98990HepG2HNRNPLL
NREPENSG00000134986.91244.852601981.89810-0.6709014.9576013.64040HepG2HNRNPU
NREPENSG00000134986.92280.126001489.849800.613802.068701.43630HepG2IGF2BP1
NREPENSG00000134986.92682.629303582.19460-0.417203.850203.06570HepG2IGF2BP2
NREPENSG00000134986.92502.068302024.454400.305505.983504.94460HepG2ILF2
NREPENSG00000134986.92508.460003603.05690-0.522404.111402.86910HepG2KHSRP
NREPENSG00000134986.92670.475503555.37630-0.412902.738201.91280HepG2LARP4
NREPENSG00000134986.91325.922801720.40740-0.375803.111101.90660HepG2LARP7
NREPENSG00000134986.92265.907803800.27860-0.7460010.151508.91970HepG2MAGOH
NREPENSG00000134986.92730.530703821.55700-0.485004.281203.51270HepG2MATR3
NREPENSG00000134986.91484.853802662.50720-0.8425011.062509.55740HepG2MSI2
NREPENSG00000134986.94962.471502347.934801.079605.514604.11810HepG2MTPAP
NREPENSG00000134986.92809.402503911.58310-0.477504.466803.67120HepG2NCBP2
NREPENSG00000134986.92018.959401555.652300.376003.614001.98650HepG2NIP7
NREPENSG00000134986.92079.542802542.79120-0.290102.385901.67880HepG2NOL12
NREPENSG00000134986.9925.341701355.17130-0.550402.297501.31250HepG2NONO
NREPENSG00000134986.94612.216302041.349201.1758030.6018028.54620HepG2NSUN2
NREPENSG00000134986.9458.66510801.11770-0.804603.734302.69020HepG2PABPC1
NREPENSG00000134986.94274.670203483.552400.295202.086501.45130HepG2PABPC4
NREPENSG00000134986.91312.332501961.82120-0.5801011.499709.96410HepG2PARN
NREPENSG00000134986.91117.773203463.51920-1.63160104.55570101.76090HepG2PCBP1
NREPENSG00000134986.92548.141101651.171900.625905.897103.54580HepG2PHF6
NREPENSG00000134986.92952.527901866.776200.6613018.8296017.12870HepG2PRPF4
NREPENSG00000134986.91329.641303524.18000-1.4063078.9578076.99620HepG2PTBP1
NREPENSG00000134986.91116.237002576.40110-1.2067029.9633028.43610HepG2PUM1
NREPENSG00000134986.91897.398502574.61790-0.440305.953504.98400HepG2PUM2
NREPENSG00000134986.91671.147102269.66820-0.441606.589905.71040HepG2PUS1
NREPENSG00000134986.93000.971103816.94510-0.347005.071104.26460HepG2QKI
NREPENSG00000134986.91434.619902275.06080-0.665203.313602.54500HepG2RAVER1
NREPENSG00000134986.91658.150202185.46910-0.398403.819803.23680HepG2RBM22
NREPENSG00000134986.91889.049403464.05830-0.8748020.7007018.96760HepG2RBM25
NREPENSG00000134986.92369.881501684.571600.492302.614001.58500HepG2RCC2
NREPENSG00000134986.92439.866503652.82000-0.5822016.9395015.62620HepG2RECQL
NREPENSG00000134986.92082.115501630.170700.352902.054201.45520HepG2RPLP0
NREPENSG00000134986.91035.051001676.19950-0.6955010.795909.67710HepG2RPS19
NREPENSG00000134986.91514.70450879.668400.783907.017005.75340HepG2RPS3A
NREPENSG00000134986.9832.016901126.97150-0.437802.152301.45090HepG2RRP9
NREPENSG00000134986.92381.878703703.87380-0.636905.618604.63750HepG2SF3A3
NREPENSG00000134986.91165.267202278.75320-0.9676018.3496016.70010HepG2SF3B1
NREPENSG00000134986.91931.672703669.27030-0.9256038.8230037.09430HepG2SF3B4
NREPENSG00000134986.93430.933202326.962300.5601011.9161010.63390HepG2SLBP
NREPENSG00000134986.91175.568402058.36020-0.8081014.3362013.04960HepG2SMN1
NREPENSG00000134986.91465.640402317.33810-0.660904.202703.00450HepG2SMNDC1
NREPENSG00000134986.97728.308002468.461801.64640164.34230162.04200HepG2SRFBP1
NREPENSG00000134986.92240.374103829.86500-0.7736030.8258029.62250HepG2SRSF1
NREPENSG00000134986.93378.494402451.922200.462403.576902.42520HepG2SRSF3
NREPENSG00000134986.91869.371002396.29750-0.358304.436503.67680HepG2SRSF5
NREPENSG00000134986.92217.916201486.539300.5771012.1237010.84520HepG2SRSF7
NREPENSG00000134986.91411.380703115.74850-1.1425057.9907056.13020HepG2SRSF9
NREPENSG00000134986.93697.143802143.305100.7865015.3659014.35600HepG2SSB
NREPENSG00000134986.91947.501402595.11870-0.414202.922601.60440HepG2SSRP1
NREPENSG00000134986.93238.270302197.241200.559403.937002.47910HepG2STAU1
NREPENSG00000134986.9516.24890764.96580-0.567302.458801.43020HepG2STIP1
NREPENSG00000134986.93825.963902628.082800.541703.544302.02740HepG2SUGP2
NREPENSG00000134986.92581.021101469.694500.8123011.3833010.16700HepG2SUPV3L1
NREPENSG00000134986.93300.581502243.914400.556605.245204.29080HepG2TARDBP
NREPENSG00000134986.92249.091903163.14920-0.492007.489706.12990HepG2TIA1
NREPENSG00000134986.9874.821401942.98360-1.1512033.1246031.44050HepG2TRIM56
NREPENSG00000134986.91751.918102370.99380-0.436605.825104.49550HepG2TUFM
NREPENSG00000134986.91977.790102814.66420-0.509104.437203.65060HepG2U2AF1
NREPENSG00000134986.9372.86850868.27860-1.2195012.3031010.72530HepG2UCHL5
NREPENSG00000134986.92199.173801346.117400.708104.693803.36820HepG2UPF2
NREPENSG00000134986.91876.354803171.31870-0.7572027.4094025.82760HepG2UTP3
NREPENSG00000134986.91248.65980787.880700.664203.378602.15930HepG2XPO5
NREPENSG00000134986.91559.549102236.41920-0.520102.744201.48680HepG2XRCC5
NREPENSG00000134986.92515.316401446.749300.7978012.3697010.86230HepG2XRN2
NREPENSG00000134986.92638.324201842.222600.5181014.4745013.13250HepG2ZC3H8
NREPENSG00000134986.94034.859503612.619400.159402.402301.88200HepG2ZNF622
NREPENSG00000134986.911.845700.958203.627802.415201.38780K562CPEB4
NREPENSG00000134986.921.743702.403303.177403.210302.39840K562GRSF1
NREPENSG00000134986.90.5008013.84910-4.789303.775902.94900K562UPF1
NREPENSG00000134986.90.4814012.32100-4.677803.243202.33390K562WDR43
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for NREP is not available on ENCORE database.





6 RBPs can affect the splicing of NREP :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SENREPENSG00000134986.9chr5-1110914661110916231110711921110712041110928321110928760.059000.006200.08955includedHepG2U2AF1
SENREPENSG00000134986.9chr5-1110914661110915271110711261110712041110928321110928760.073000.000170.01893includedHepG2TBRG4
SENREPENSG00000134986.9chr5-1110914661110915271110711261110712041110928321110928760.141000.000000.00000includedHepG2SRSF1
SENREPENSG00000134986.9chr5-1110914661110915271110711261110712041110928321110928760.083000.000010.00191includedHepG2IGF2BP3
SENREPENSG00000134986.9chr5-1110914661110915271110711261110712041110928321110928760.133000.000050.00413includedHepG2PCBP1
A3SSNREPENSG00000134986.9chr5-111091466111091623111091466111091527111092832111092876-0.123000.000900.06364shorterHepG2SF3B4

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for NREP is not avaliable on ENCORE database.