LRIG1

General Information

Gene Name       : LRIG1
Gene ID             : ENSG00000144749.13
Essential Gene : No

Functions

Localization

Domains (AlphaFold: LRIG1)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878LRIG1ENSG00000144749.137.2210.648.93ENCSR000AEF
HepG2LRIG1ENSG00000144749.1316.8914.6315.76ENCSR985KAT
K562LRIG1ENSG00000144749.130.040.050.04ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for LRIG1 is not avaliable on ENCORE database.



Proteins bound to RNA
  • LRIG1 RNA is bound by 11 proteins.  







eCLIP assay for LRIG1 is not avaliable on ENCORE database.





11 proteins are bound to LRIG1 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr36642926966429317-3'-UTR,intron-Distal4.488513.32080HepG2FUBP3
chr36655112666551154-5'-UTR,intron-Distal4.9534310.52110HepG2DDX3X
chr36655136266551402-5'-UTR,intron-Distal,intron-Proximal4.9064613.13184HepG2DDX3X
chr36655105666551093-5'-UTR,intron-Distal3.533079.39478HepG2DDX3X
chr36655095566551056-5'-UTR,intron-Distal4.3113830.33943HepG2DDX3X
chr36655127766551421-5'-UTR,intron-Distal,intron-Proximal3.527046.40214HepG2NCBP2
chr36655127066551362-5'-UTR,intron-Distal,intron-Proximal5.8946454.14451HepG2DDX3X
chr36655088166550952-5'-UTR,intron-Distal3.8517913.13583HepG2DDX3X
chr36655115466551199-5'-UTR,intron-Distal5.0934810.52110HepG2DDX3X
chr36655071066550758-CDS,intron-Distal5.0849510.02475HepG2DDX3X
chr36655063166550692-CDS,intron-Distal4.3325512.93942HepG2DDX3X
chr36645569566455755-CDS,intron-Distal,intron-Proximal4.213899.23582HepG2SF3B4
chr36643374866433808-CDS,intron-Distal3.480333.57857HepG2BCLAF1
chr36645776066457814-CDS,intron-Distal,intron-Proximal4.176893.79199HepG2PPIG
chr36643340266433498-CDS,intron-Distal,intron-Proximal3.835343.12746HepG2GRWD1
chr36655036966550450-intron-Distal3.358104.45183HepG2CSTF2T
chr36654418366544228-intron-Distal5.5270611.94006HepG2PTBP1
chr36653614766536246-intron-Distal3.580613.68481HepG2HNRNPM
chr36645414966454216-intron-Distal4.159233.62366HepG2HNRNPM
chr36643471666434806-intron-Distal,intron-Proximal4.053103.27601HepG2RBM5
chr36654484066544945-intron-Distal4.324174.51355HepG2PTBP1
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for LRIG1 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for LRIG1 is not available on ENCORE database.

  • 97 RBPs can affect the levels of LRIG1.  








The Knockdown/knockout RNA-Seq assay for LRIG1 is not available on ENCORE database.





97 RBPs can affect the gene expression of LRIG1 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
LRIG1ENSG00000144749.9314.43620605.20670-0.9447010.417908.52320HepG2AATF
LRIG1ENSG00000144749.9777.737001053.13480-0.437302.826401.87520HepG2ABCF1
LRIG1ENSG00000144749.9343.19960785.57610-1.1947027.7274026.27020HepG2ACO1
LRIG1ENSG00000144749.9701.27350536.156900.387202.428301.49250HepG2ADAR
LRIG1ENSG00000144749.9740.352801396.04770-0.9151010.238409.28040HepG2AKAP1
LRIG1ENSG00000144749.9550.74940896.06980-0.702206.391904.84970HepG2AKAP8
LRIG1ENSG00000144749.9708.328101048.31260-0.565608.133707.05780HepG2AUH
LRIG1ENSG00000144749.9865.08720543.573700.670306.860705.96610HepG2BOP1
LRIG1ENSG00000144749.92105.859101097.427500.9402015.0541013.41850HepG2CIRBP
LRIG1ENSG00000144749.9287.76570561.77540-0.965106.347005.18960HepG2CNOT7
LRIG1ENSG00000144749.9656.53970499.021100.395702.357201.71520HepG2CPSF6
LRIG1ENSG00000144749.9758.97130549.824200.465004.516903.21660HepG2YBX3
LRIG1ENSG00000144749.9437.84970312.655900.485802.929901.82590HepG2CSTF2
LRIG1ENSG00000144749.9370.69430619.71860-0.741405.044503.03090HepG2CSTF2T
LRIG1ENSG00000144749.9340.87580827.31880-1.2792027.5920026.00580HepG2CELF1
LRIG1ENSG00000144749.9793.95350550.587100.528004.327102.90160HepG2DDX1
LRIG1ENSG00000144749.9409.22080623.95250-0.608605.594903.75010HepG2DDX52
LRIG1ENSG00000144749.9193.35240497.64700-1.3639013.2203011.68760HepG2DDX55
LRIG1ENSG00000144749.9652.29530885.48500-0.440903.330702.22850HepG2DDX5
LRIG1ENSG00000144749.9639.336301148.81980-0.845506.862605.92450HepG2DDX6
LRIG1ENSG00000144749.91006.54040751.564200.421304.889504.03690HepG2DKC1
LRIG1ENSG00000144749.9405.03220535.12160-0.401803.563102.84050HepG2DNAJC2
LRIG1ENSG00000144749.9498.20350744.42170-0.579404.426803.28750HepG2EEF2
LRIG1ENSG00000144749.9416.75020620.55780-0.574404.294202.90860HepG2EFTUD2
LRIG1ENSG00000144749.9742.594001104.31880-0.572504.882804.10620HepG2EIF2S1
LRIG1ENSG00000144749.9339.83300604.28700-0.830406.989005.60810HepG2EIF3D
LRIG1ENSG00000144749.91102.40030630.507200.8060012.3577010.41810HepG2EIF3G
LRIG1ENSG00000144749.91178.03650877.612400.424605.624604.50310HepG2EIF4G1
LRIG1ENSG00000144749.92184.698301203.581200.8600025.5705024.05890HepG2ETF1
LRIG1ENSG00000144749.9298.67370540.11710-0.854709.919907.70400HepG2FAM120A
LRIG1ENSG00000144749.9332.39100636.24990-0.9367011.447509.40300HepG2FASTKD2
LRIG1ENSG00000144749.9484.162801063.45140-1.1352013.7654012.24940HepG2FIP1L1
LRIG1ENSG00000144749.91489.41790499.895501.575004.009702.78560HepG2FTO
LRIG1ENSG00000144749.91048.71520852.061900.299502.082501.39290HepG2FUBP3
LRIG1ENSG00000144749.9375.22460779.35290-1.054509.555107.63900HepG2FUS
LRIG1ENSG00000144749.9778.999801142.25280-0.552204.469003.63130HepG2G3BP1
LRIG1ENSG00000144749.9416.80760565.65430-0.440502.356201.76180HepG2GPKOW
LRIG1ENSG00000144749.9348.62400520.01000-0.576902.944601.79780HepG2GRSF1
LRIG1ENSG00000144749.9357.88550734.46150-1.037208.441605.91980HepG2GTF2F1
LRIG1ENSG00000144749.9777.71240545.052500.512704.264503.48610HepG2HNRNPA1
LRIG1ENSG00000144749.9299.92530463.73950-0.628703.689002.06700HepG2HNRNPAB
LRIG1ENSG00000144749.9760.96950419.450000.8592014.5367013.06450HepG2HNRNPF
LRIG1ENSG00000144749.9955.99580539.816600.824409.132008.06180HepG2HNRNPLL
LRIG1ENSG00000144749.9532.89610733.84140-0.461603.651602.57110HepG2HNRNPM
LRIG1ENSG00000144749.9734.89640413.039400.8312010.941809.59610HepG2IGF2BP1
LRIG1ENSG00000144749.9477.50720615.19280-0.365503.675102.84120HepG2ILF2
LRIG1ENSG00000144749.9819.19460535.129200.614204.321102.77170HepG2KHDRBS1
LRIG1ENSG00000144749.9843.492601167.85950-0.469402.846901.82920HepG2KHSRP
LRIG1ENSG00000144749.9374.50110547.64470-0.548304.068702.09510HepG2CCAR2
LRIG1ENSG00000144749.91013.61480718.068800.497207.932606.27300HepG2KIF1C
LRIG1ENSG00000144749.9417.62530606.19570-0.537604.140502.74520HepG2LARP7
LRIG1ENSG00000144749.9758.528001231.83280-0.699507.110206.07450HepG2MAGOH
LRIG1ENSG00000144749.9247.33860632.42850-1.3544010.809108.85940HepG2METAP2
LRIG1ENSG00000144749.9551.41020860.85570-0.642606.541805.34890HepG2MSI2
LRIG1ENSG00000144749.9982.50570550.597500.835402.378601.48760HepG2MTPAP
LRIG1ENSG00000144749.91069.07430882.068000.277302.268101.57790HepG2NOL12
LRIG1ENSG00000144749.91284.60160478.668801.4241014.0504012.50250HepG2NSUN2
LRIG1ENSG00000144749.9246.85540513.41160-1.056406.847605.40970HepG2PABPC1
LRIG1ENSG00000144749.9379.16880596.13510-0.652807.499506.21570HepG2PARN
LRIG1ENSG00000144749.91169.77650537.171301.1227027.7033025.55940HepG2PPIL4
LRIG1ENSG00000144749.9988.11030727.476700.441705.425204.37650HepG2PRPF4
LRIG1ENSG00000144749.9424.334901177.80660-1.4728022.6173021.34120HepG2PTBP1
LRIG1ENSG00000144749.91495.33780842.019500.8284013.6761012.48890HepG2PUF60
LRIG1ENSG00000144749.9593.87280893.85070-0.589909.490908.53020HepG2PUM1
LRIG1ENSG00000144749.9497.15730800.14930-0.6866010.983709.89490HepG2PUS1
LRIG1ENSG00000144749.9867.008301275.77360-0.557305.676804.82890HepG2QKI
LRIG1ENSG00000144749.9687.53070954.31450-0.473004.983203.87500HepG2RBM15
LRIG1ENSG00000144749.9355.593801005.97570-1.5003038.5770037.07910HepG2RBM22
LRIG1ENSG00000144749.9782.501301310.85580-0.744308.321607.47530HepG2NELFE
LRIG1ENSG00000144749.9258.84810588.01730-1.1838016.2408014.92510HepG2RPS19
LRIG1ENSG00000144749.9502.35470674.14820-0.424402.708201.91530HepG2RPS2
LRIG1ENSG00000144749.9441.81980774.58810-0.810005.487703.35400HepG2RTF1
LRIG1ENSG00000144749.91028.07970536.341500.9386022.4658020.87600HepG2SAFB2
LRIG1ENSG00000144749.9728.82660531.062100.456602.566001.30530HepG2SART3
LRIG1ENSG00000144749.9447.09460590.13620-0.400502.336901.46890HepG2SERBP1
LRIG1ENSG00000144749.91923.780901295.945000.569803.868703.06500HepG2SF3A3
LRIG1ENSG00000144749.91513.80920534.297301.5024034.5351032.38100HepG2SF3B1
LRIG1ENSG00000144749.9834.020001226.40010-0.556304.821104.07410HepG2SF3B4
LRIG1ENSG00000144749.91450.84950807.385600.8455024.7506023.06080HepG2SLBP
LRIG1ENSG00000144749.9376.41130625.46190-0.7326010.716409.58330HepG2SMN1
LRIG1ENSG00000144749.9153.19200725.96790-2.2446035.1702032.00670HepG2SMNDC1
LRIG1ENSG00000144749.91009.55030594.504600.763905.257804.17140HepG2SNRNP70
LRIG1ENSG00000144749.9462.230501136.22070-1.2976038.1003036.80000HepG2SRFBP1
LRIG1ENSG00000144749.9664.943201280.03440-0.9449012.1592011.31810HepG2SRSF1
LRIG1ENSG00000144749.9605.29500412.092900.554606.046705.08030HepG2SRSF7
LRIG1ENSG00000144749.9675.498801041.32290-0.624406.257405.48710HepG2SRSF9
LRIG1ENSG00000144749.9298.81830490.52130-0.715004.759503.27750HepG2STIP1
LRIG1ENSG00000144749.9333.09100495.40620-0.572702.951502.25650HepG2SUPV3L1
LRIG1ENSG00000144749.91734.988201150.373300.592707.155406.32670HepG2TAF15
LRIG1ENSG00000144749.9816.54610526.220500.633805.873604.87510HepG2TARDBP
LRIG1ENSG00000144749.9798.281101057.21830-0.405303.398402.47620HepG2TIA1
LRIG1ENSG00000144749.9667.37600909.80910-0.447102.901002.25840HepG2U2AF1
LRIG1ENSG00000144749.9338.99800700.11690-1.046308.190706.08680HepG2XRCC5
LRIG1ENSG00000144749.9453.32140782.97140-0.788405.823304.31610HepG2XRCC6
LRIG1ENSG00000144749.9809.49780487.672800.731006.507805.41200HepG2XRN2
LRIG1ENSG00000144749.9574.43040717.91870-0.321702.830802.15270HepG2ZC3H8
LRIG1ENSG00000144749.91578.520201264.015000.320505.036004.35270HepG2ZNF622
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for LRIG1 is not available on ENCORE database.






No RBPs affect the alternative splcing events of LRIG1 on ENCORE database.





The Knockdown/knockout RNA-Seq assay for LRIG1 is not avaliable on ENCORE database.