KRCC1

General Information

Gene Name       : KRCC1
Gene ID             : ENSG00000172086.7
Essential Gene : No

Functions

Localization

Domains (AlphaFold: KRCC1)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878KRCC1ENSG00000172086.723.4818.5221.00ENCSR000AEF
HepG2KRCC1ENSG00000172086.72.025.023.52ENCSR985KAT
K562KRCC1ENSG00000172086.72.273.132.70ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for KRCC1 is not avaliable on ENCORE database.



Proteins bound to RNA
  • KRCC1 RNA is bound by 8 proteins.  







eCLIP assay for KRCC1 is not avaliable on ENCORE database.





8 proteins are bound to KRCC1 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr28835517888355247-5'-UTR,intron-Distal3.608487.57997HepG2NKRF
chr28835514188355249-5'-UTR,intron-Distal,intron-Proximal4.041909.71466HepG2NCBP2
chr28835519188355248-5'-UTR,intron-Distal3.128476.10085HepG2DGCR8
chr28835514288355213-5'-UTR,intron-Distal5.056153.28019K562DDX3X
chr28835518088355249-5'-UTR,intron-Distal,intron-Proximal3.365275.42306HepG2XPO5
chr28835456688354638-intron-Distal4.109323.29554HepG2GTF2F1
chr28835199788352044-intron-Distal3.198003.89889HepG2HNRNPL
chr28835455588354642-intron-Distal3.927873.21433HepG2TAF15
chr28835140188351493-intron-Distal3.659427.69735HepG2HNRNPL
chr28835206988352125-intron-Distal3.353948.19245HepG2HNRNPL
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for KRCC1 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for KRCC1 is not available on ENCORE database.

  • 92 RBPs can affect the levels of KRCC1.  








The Knockdown/knockout RNA-Seq assay for KRCC1 is not available on ENCORE database.





92 RBPs can affect the gene expression of KRCC1 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
KRCC1ENSG00000172086.7300.84790186.690600.688305.180404.40020HepG2ACO1
KRCC1ENSG00000172086.7587.51370321.725900.868707.809606.52200HepG2ASCC1
KRCC1ENSG00000172086.7229.74900150.556700.609702.516401.65910HepG2BCLAF1
KRCC1ENSG00000172086.7184.27960364.36400-0.983507.858806.91400HepG2BOP1
KRCC1ENSG00000172086.7636.83530358.960900.827009.509408.20430HepG2CALR
KRCC1ENSG00000172086.7801.54030334.510801.2606018.8220017.22170HepG2CPSF6
KRCC1ENSG00000172086.7317.67770188.835500.750303.794602.11030HepG2CSTF2T
KRCC1ENSG00000172086.7119.52000203.23930-0.765903.918802.55860HepG2DDX1
KRCC1ENSG00000172086.7281.20630203.607200.465702.046301.45270HepG2DDX21
KRCC1ENSG00000172086.7325.10320199.174700.706804.555203.37100HepG2DDX24
KRCC1ENSG00000172086.7296.99850159.396500.897704.610403.00310HepG2DDX27
KRCC1ENSG00000172086.7278.94780372.47980-0.417201.820801.30200HepG2DDX3X
KRCC1ENSG00000172086.7280.01460187.027500.582202.898601.57650HepG2DDX47
KRCC1ENSG00000172086.7180.72670379.86000-1.071705.953404.54130HepG2DDX59
KRCC1ENSG00000172086.7274.56510178.619400.620203.703402.94130HepG2DKC1
KRCC1ENSG00000172086.7285.34340187.432800.606202.670901.58670HepG2AGO1
KRCC1ENSG00000172086.7218.15380307.59420-0.495702.162101.63040HepG2EIF2S1
KRCC1ENSG00000172086.7425.58820276.933400.619802.881601.76760HepG2ESF1
KRCC1ENSG00000172086.7513.06610300.718100.770608.326407.38060HepG2ETF1
KRCC1ENSG00000172086.767.40940322.71960-2.2593012.7936011.31890HepG2FIP1L1
KRCC1ENSG00000172086.7234.78740141.788600.727503.508902.08730HepG2FKBP4
KRCC1ENSG00000172086.7244.76570342.93260-0.486502.227101.60390HepG2FXR1
KRCC1ENSG00000172086.779.75500165.07740-1.049502.964602.03470HepG2GEMIN5
KRCC1ENSG00000172086.7126.16410215.85050-0.774703.476402.32600HepG2GNB2L1
KRCC1ENSG00000172086.7767.05910379.207201.0163010.796609.58920HepG2GPKOW
KRCC1ENSG00000172086.7324.19230223.792200.534602.615401.93960HepG2HNRNPC
KRCC1ENSG00000172086.7108.54040322.08360-1.5692014.1475012.68760HepG2HNRNPK
KRCC1ENSG00000172086.7410.28890298.792100.457403.364402.62760HepG2HNRNPL
KRCC1ENSG00000172086.7121.80740222.76000-0.870902.926501.94930HepG2HNRNPM
KRCC1ENSG00000172086.7230.56240323.40590-0.488202.176301.56920HepG2IGF2BP2
KRCC1ENSG00000172086.7199.66680325.26990-0.704003.333702.22120HepG2KHSRP
KRCC1ENSG00000172086.7375.99210511.73690-0.444702.156701.43110HepG2LARP4
KRCC1ENSG00000172086.7133.30120211.42480-0.665502.806301.66450HepG2LARP7
KRCC1ENSG00000172086.7202.52620344.98190-0.768404.247003.48120HepG2MATR3
KRCC1ENSG00000172086.7127.30590353.11610-1.4718013.1904011.87000HepG2NCBP2
KRCC1ENSG00000172086.7704.94670320.869101.1354014.3072012.74850HepG2NSUN2
KRCC1ENSG00000172086.741.79680118.96440-1.509104.389603.25640HepG2PABPC1
KRCC1ENSG00000172086.7144.90040241.00930-0.734004.648603.67360HepG2PRPF4
KRCC1ENSG00000172086.7508.78810325.627200.643705.753004.57330HepG2RBM15
KRCC1ENSG00000172086.7313.94580130.599001.265308.860107.45680HepG2RPS3A
KRCC1ENSG00000172086.773.89720130.02350-0.815202.301101.57720HepG2RRP9
KRCC1ENSG00000172086.775.84760323.60980-2.0931020.5583018.66830HepG2SF3A3
KRCC1ENSG00000172086.7676.26000398.558100.762704.685503.65720HepG2SNRNP70
KRCC1ENSG00000172086.7257.29520385.40340-0.582902.701101.71200HepG2SRSF3
KRCC1ENSG00000172086.7377.42580246.457200.614804.942604.29560HepG2SSB
KRCC1ENSG00000172086.7375.02830215.003700.802503.969902.51350HepG2SUB1
KRCC1ENSG00000172086.7355.28700218.048300.704205.624004.30670HepG2SUPT6H
KRCC1ENSG00000172086.7318.36320169.578800.908605.198904.31770HepG2SUPV3L1
KRCC1ENSG00000172086.7328.75760216.044000.605602.970102.45440HepG2TIAL1
KRCC1ENSG00000172086.7332.36140217.948200.608702.181701.66900HepG2TRIM56
KRCC1ENSG00000172086.7160.07850277.08040-0.791505.409904.61960HepG2UTP3
KRCC1ENSG00000172086.7229.76180315.63700-0.458102.923102.36530HepG2ZNF622
KRCC1ENSG00000172086.713.1156066.46280-2.341307.165706.31590K562AGGF1
KRCC1ENSG00000172086.79.6602069.15440-2.839709.662708.34960K562AKAP8L
KRCC1ENSG00000172086.722.4027072.55360-1.695405.768304.39190K562ATP5C1
KRCC1ENSG00000172086.7204.73610116.209700.816902.236401.45760K562BOP1
KRCC1ENSG00000172086.7359.2431075.797702.2446028.8950026.99760K562DDX47
KRCC1ENSG00000172086.729.3112074.43490-1.344504.370203.23270K562DKC1
KRCC1ENSG00000172086.7152.3989056.909701.421008.569507.40850K562EIF2S2
KRCC1ENSG00000172086.7103.8006019.738302.394604.768103.40940K562EIF3A
KRCC1ENSG00000172086.740.7177017.036301.256902.260501.51630K562EIF4A3
KRCC1ENSG00000172086.71.8330014.87020-3.020202.564401.32380K562EWSR1
KRCC1ENSG00000172086.7255.26080106.546601.260408.755307.03760K562FTO
KRCC1ENSG00000172086.758.0192017.716801.711304.425303.68440K562FXR1
KRCC1ENSG00000172086.713.8997046.24360-1.734203.925602.19170K562G3BP1
KRCC1ENSG00000172086.7325.41280117.990301.4635013.8445012.04850K562GPKOW
KRCC1ENSG00000172086.7201.4122075.863301.408608.465107.12880K562GRSF1
KRCC1ENSG00000172086.711.83880136.92760-3.5318010.446407.55260K562HNRNPA2B1
KRCC1ENSG00000172086.7257.2283035.678902.849807.037806.12760K562HNRNPC
KRCC1ENSG00000172086.7216.7008068.504801.6613013.9302011.45430K562HNRNPL
KRCC1ENSG00000172086.734.83950147.51150-2.082005.133402.17450K562HNRNPUL1
KRCC1ENSG00000172086.7252.29090115.145901.131503.512102.61840K562HSPD1
KRCC1ENSG00000172086.717.5563048.32720-1.460902.863801.81660K562IGF2BP2
KRCC1ENSG00000172086.725.8172073.40110-1.507505.087703.90290K562KIF1C
KRCC1ENSG00000172086.7185.73620100.728900.882703.422402.37120K562KRR1
KRCC1ENSG00000172086.7204.47880115.168500.828103.766602.73360K562METAP2
KRCC1ENSG00000172086.711.6186057.63370-2.310505.223203.87830K562NAA15
KRCC1ENSG00000172086.717.35610119.86010-2.787807.571205.65590K562PABPN1
KRCC1ENSG00000172086.7272.2176064.087502.0865018.1845016.12550K562PCBP3
KRCC1ENSG00000172086.7240.1137049.152502.2883010.670809.14400K562POLR2G
KRCC1ENSG00000172086.731.59560142.58600-2.174005.909903.51050K562PPP1R8
KRCC1ENSG00000172086.767.2220022.785301.560703.736102.86430K562PRPF8
KRCC1ENSG00000172086.7155.4441099.120300.649002.531601.75170K562PUF60
KRCC1ENSG00000172086.7236.03030105.369801.163404.291602.94040K562PUM1
KRCC1ENSG00000172086.7235.56420103.303001.189109.248407.47760K562PUM2
KRCC1ENSG00000172086.76.6664068.60470-3.363309.773508.80080K562PUS1
KRCC1ENSG00000172086.713.0908066.82630-2.351907.385906.44880K562RBM15
KRCC1ENSG00000172086.7161.9516049.855601.6996011.060408.84200K562NELFE
KRCC1ENSG00000172086.799.1028023.206802.094307.975806.57550K562RPS19
KRCC1ENSG00000172086.7246.2034097.763501.332403.312601.57220K562RPS3A
KRCC1ENSG00000172086.798.5392038.790501.344903.768302.57760K562RPS3
KRCC1ENSG00000172086.733.14740109.66530-1.726103.837502.35310K562SF1
KRCC1ENSG00000172086.7200.95260112.185000.840903.586202.47220K562SF3B1
KRCC1ENSG00000172086.721.53360125.86580-2.547206.798404.57470K562SNRNP200
KRCC1ENSG00000172086.7179.5208048.410601.8907013.5244011.96220K562SRSF1
KRCC1ENSG00000172086.7301.1046097.745001.623109.115406.32590K562STIP1
KRCC1ENSG00000172086.7187.3357086.487801.115007.036104.81790K562SUCLG1
KRCC1ENSG00000172086.753.4210020.890701.354402.834501.35290K562TAF15
KRCC1ENSG00000172086.7119.0581049.005901.280505.655404.62330K562TARDBP
KRCC1ENSG00000172086.784.9077047.268800.844902.378001.62660K562TIA1
KRCC1ENSG00000172086.780.8226023.346401.791505.784204.26190K562UCHL5
KRCC1ENSG00000172086.7177.4867091.045900.962904.337602.82180K562UTP3
KRCC1ENSG00000172086.769.9651023.776801.557004.402902.74880K562XRN2
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for KRCC1 is not available on ENCORE database.






No RBPs affect the alternative splcing events of KRCC1 on ENCORE database.





The Knockdown/knockout RNA-Seq assay for KRCC1 is not avaliable on ENCORE database.